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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-04 04:39:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Zebrafish DNA sequence from clone DKEY-265H18 in linkage group 20.
AL928808.15:50799-50815
CAAAAGGTCTCCCAAACAAGTAACTGGAAG50799TTCATCACGCCAAATACTAAGCCTAAAGCCTCTTTTTCAATTTGAGA
Danio rerio strain T5D chromosome 20.
CP068754.1:17300582-17300598
CAAAAGGTCTCCCAAACAAGTAACTGGAAG17300582TTCATCACGCCAAATACTAAGCCTAAAGCCTCTTTTTCAATTTGAGA
Danio rerio strain Tubingen chromosome 20.
CP137034.2:19688891-19688907
CAAAAGGTCTCCCAAACAAGTAACTGGAAG19688891TTCATCACGCCAAATACTAAGCCTAAAGCCTCTTTTTCAATTTGAGA
Danio rerio genome assembly, chromosome: 20.
LR812057.1:17459542-17459558
CAAAAGGTCTCCCAAACAAGTAACTGGAAG17459542TTCATCACGCCAAATACTAAGCCTAAAGCCTCTTTTTCAATTTGAGA
Danio rerio genome assembly, chromosome: 5.
LR812067.1:46134018-46134034
AAAGGTCTCCCAAACAAGTAATCATGGAAC46134018TTCATCACGCCAAATACTAAGCCTAAAGCCTCTTTTTCAATTTGAGA
Danio rerio genome assembly, chromosome: 20.
LR812082.1:17346910-17346926
CAAAAGGTCTCCCAAACAAGTAACTGGAAG17346910TTCATCACGCCAAATACTAAGCCTAAAGCCTCTTTTTCAATTTGAGA
Danio kyathit genome assembly, chromosome: 6.
LR812524.1:33306923-33306939
AAAGGTCTCCCAAACAAGTAATCATGGAAC33306923TTCATCACGCCAAATACTAAGCCTAAAGCCTCTTTTTCAATTTGAGA
Danio kyathit genome assembly, chromosome: 8.
LR812526.1:47668877-47668893
AAAGGTCTCCCAAACAAGTAATCATGGAAC47668877TTCATCACGCCAAATACTAAGCCTAAAGCCTCTTTTTCAATTTGAGA
Danio kyathit genome assembly, chromosome: 25.
LR812543.1:26872283-26872299
AAAGGTCTCCCAAACAAGTAATCATGGAAC26872283TTCATCACGCCAAATACTAAGCCTAAAGCCTCTTTTTCAATTTGAGA
Danio rerio strain Nadia (NA) genome assembly, chromosome: 14.
LR812582.1:21387395-21387411
AAAGGTCTCCCAAACAAGTAATCATGGAAC21387395TTCATCACGCCAAATACTAAGCCTAAAGCCTCTTTTTCAATTTGAGA
Danio rerio genome assembly, chromosome: 20.
LR812613.1:16055250-16055266
CAAAAGGTCTCCCAAACAAGTAACTGGAAG16055250TTCATCACGCCAAATACTAAGCCTAAAGCCTCTTTTTCAATTTGAGA
Danio rerio genome assembly, chromosome: 20.
OX063309.1:18972211-18972227
CAAAAGGTCTCCCAAACAAGTAACTGGAAG18972211TTCATCACGCCAAATACTAAGCCTAAAGCCTCTTTTTCAATTTGAGA
Podarcis lilfordi genome assembly, chromosome: 8.
OX395133.1:6241092-6241108
GGGGCATACCTGATTCAGGAGCTGACCTGA6241092TTCATCACGCCAAATACTCTCTCCCTCGAGGTGTTGAAAATACAGAG
Pungitius pungitius genome assembly, chromosome: 14.
OX438554.1:15254222-15254238
GCACACGCTCACACACGGCTGTGAAATGAA15254222TTCATCACGCCAAATACTTGGTTCTTTTACTGTTGTATTAAAAACTC
Gymnoscopelus braueri genome assembly, chromosome: 9.
OY725516.1:23600554-23600570
ATTTTCAATGTGATGTTTGAATGTAAACAA23600554TTCATCACGCCAAATACCTACAGGCTTATGTGACTCTCAATATTGCT
Conger conger genome assembly, chromosome: 17.
OY741330.1:24277056-24277072
TTAGTGACATCTGTGGTCATAAAAGTTTGT24277056TTCATCACGCCAAATACCCGAGCTCGAAGCCATTTAATAGAAGCAAA
Nannobrachium achirus genome assembly, chromosome: 6.
OY997643.1:46009499-46009515
TCGTGAGGTTTCTTCAGTGCCCAACCATAC46009499TTCATCACGCCAAATACTAATGAGTCATTTGAGTGGCAAAGAATGAA
Sequence 1 from patent US 11396665.
OO402379.1:1325492-1325508
GAAGGAAGGACTAAGGGATTATCTCCTAAA1325492TTCATCACGCCAAATACGCGCCGAGCGAAGCTTTGGGTTGGTCCCTG
MAG: viral metagenome isolate GVMAG-M-3300023179-103, sequence.
MN739697.1:12219-12235
TGGTTTTCTTGCCAATATGTCTTTCATTAA12219TTCATCACGCCAAATACATATCCAATAATATGGACTGGTATTGTCTA
Nitrospirales bacterium isolate 78038947-5669-4080-b1cf-e9f6117fe586 genome assembly, chromosome: 2.
OY820906.1:4126081-4126097
ACCCCTTCTTGTGCGGGTGTGTGGTTATAT4126081TTCATCACGCCAAATACTTCGGAATCCGCAGGGCCACTCACGCGCGT
RET7SJ_34D09.T7 Schistosoma japonicum reverse cDNA Schistosoma japonicum cDNA, mRNA sequence.
CV674700.1:651-667
AACAGGACAATGATCAACTGACCAGTGTAA651TTCATCACGCCAAATACGTAGGCGTTCAAAAGCACTATCCGATAAAC
1093015280291 Global-Ocean-Sampling_GS-28-01-01-1P6-2P0KB marine metagenome genomic clone 1061002359897 5', genomic survey sequence.
EJ435950.1:458-474
GCCGCTGGCTAGATGTTGTGAAAGAGCATC458TTCATCACGCCAAATACCTGTATTATCTATAACAATTGGAGAATTAA
Aspergillus niger contig An01c0200, genomic contig.
AM269967.1:2868-2884
GAAGGAAGGACTAAGGGATTATCTCCTAAA2868TTCATCACGCCAAATACGCGCCGAGCGAAGCTTTGGGTTGGTCCCTG
Brassica napus cultivar Xiang5A chromosome 8.
CP123883.1:33294422-33294438
ATACTAAATTTGGTTTAAACTTTAACACAA33294422TTCATCACGCCAAATACTAAAATAATATATTTTAATACTTTTCATTT
Picea abies fosmid clone LuSpFOS_25, isolate Z4006.
HF937090.1:18928-18944
CAGTTGAAGACATCTATCCAATCCAAGCCT18928TTCATCACGCCAAATACTCTCCATAGGTTTCAAACTTTAATGAAATT
Citrus sinensis genome assembly, chromosome: 9.
OY754326.1:4154989-4155005
AAAATTTCTGACAACATGCGCCCTTGCAAT4154989TTCATCACGCCAAATACTATATACGTAGGGTCATGGGGACAGCCACA
Calendula officinalis genome assembly, chromosome: 5.
OY970824.1:16700431-16700447
AAGAACGACAATTTAACGATTCTATGCTAT16700431TTCATCACGCCAAATACATCTTTTGTATATCCGGCTCTAACATAAAA
Halomonas axialensis Althf1 DNA, complete genome.
AP019517.2:2681733-2681749
TTTACACTCAAGGTGCTGGCCTAGACCCGC2681733TTCATCACGCCAAATACCGGTGTTATCAACAATCACCGCGTTGTGAA
Spirosoma aerolatum strain KACC 17939 chromosome, complete genome.
CP020104.1:6195018-6195034
CGGAAGTAGGGCAGTATTTCGCGGATCACG6195018TTCATCACGCCAAATACGTTGGTGTCAAACTGGCGTTGTACCTGTTC
Paraphotobacterium marinum strain NSCS20N07D chromosome small, complete sequence.
CP022356.1:611829-611845
AAAGCTTTTATCATTTAGCTCTCCAAGTAC611829TTCATCACGCCAAATACCAGCGTTGTAAATTAAAAGGTCAATACTTT
Flavobacterium eburneipallidum strain IMCC36793 chromosome, complete genome.
CP114291.2:2642483-2642499
AAGCATTAGAAGAGCTTGCAGTTTCCGAAA2642483TTCATCACGCCAAATACTGCGACGATGCACTTTTACGAATAAAAAAA
Halomonas sp. HAL1 chromosome, complete genome.
CP130610.1:2386196-2386212
TTTGCACTTCAAGTGCTGGCCCAAGCCCTC2386196TTCATCACGCCAAATACCGGTATTATCAACGATAACGGCATTGTTGA
Oceanisphaera sp. IT1-181 chromosome, complete genome.
CP136856.1:2097124-2097140
TTTGGCTTGCAGGTGCTGGCCTAGGCCGTC2097124TTCATCACGCCAAATACCGGTATTATCAACGATTAAGGCATCGTTAA
Macrobrachium nipponense isolate FS-2020 chromosome 3.
CP062023.1:77486099-77486115
GAACATTATTATTACAAATCTTGTGATTAC77486099TTCATCACGCCAAATACAGATGATAAAATGCATTTAAAAGTTGAATA
Hedya salicella genome assembly, chromosome: 16.
FR990112.1:1388636-1388652
TTTTTGTATGTTTGTACGGGTCGTTGTGGC1388636TTCATCACGCCAAATACGCTAAGCGGATTTCAACTATTTTTGGTACA
Hedya salicella genome assembly, chromosome: 17.
FR990113.1:12789855-12789871
AGTTTTTTTTTGGATTTTTGTCATTGTCGT12789855TTCATCACGCCAAATACGGATTTAATTTTTTTTGGTACACAGGTATC
Hedya salicella genome assembly, chromosome: 24.
FR990120.1:460980-460996
TGTTTTTAATTTTGTATGTGTCGTTGTGGC460980TTCATCACGCCAAATACGGCTACACGGATTTCAACTATTTTTGGTAC
Schistosoma mansoni strain Puerto Rico genome assembly, chromosome: 3.
HE601626.3:24943345-24943361
AGATATTTCGCTCGCATGACAATCAGTGTG24943345TTCATCACGCCAAATACAAATAAAGAACATATATACATAAACATTCG
Schistosoma mansoni strain Puerto Rico genome assembly, chromosome: 3.
HE601626.3:24980637-24980653
AGATATTTCGCTCGCATGACAATCAGTGTG24980637TTCATCACGCCAAATACAAATAAAGAACATATATACATAAACATTCG
Phalera bucephala genome assembly, chromosome: 3.
LR990612.1:36423489-36423505
GGAAAAATGTTTCGTTCCCTCTCTCTTTAT36423489TTCATCACGCCAAATACCTAGTATGCCTTATGGTATACGTAGAGTAG
Phalera bucephala genome assembly, chromosome: 27.
LR990636.1:1744793-1744809
AAAGTGCACGTTGTCCTTCTATCTATCTAT1744793TTCATCACGCCAAATACTTGCGAGGTAGAGAAAGAATAAAGTTCCAA
Endotricha flammealis genome assembly, chromosome: 8.
LR990860.1:361262-361278
ATTTCTCACTCACAGAACGAAATAAATTTC361262TTCATCACGCCAAATACTGTGATAGCGTACTTGGTTAAGCCCATTTT
Pararge aegeria genome assembly, chromosome: 13.
LR990904.1:8134937-8134953
TCTGATGTTTTGACAACCTATTTTATTTAT8134937TTCATCACGCCAAATACCTACTAATGGGTACCTCAATACACCTGCTC
Ceutorhynchus assimilis genome assembly, chromosome: 7.
OU892283.1:33070961-33070977
GTGTAACAACTGATGTAGAAGTATTTGATT33070961TTCATCACGCCAAATACTCGGAATTTAACCACTTTTATGAGGAGGCA
Nemurella pictetii genome assembly, chromosome: 7.
OV121122.1:11301180-11301196
GTCTTCTGGCCAGATGTTTATTCCGTCGCC11301180TTCATCACGCCAAATACACGCTAGCTCGTCGCACAGCACTCTAACAT
Agonopterix subpropinquella genome assembly, chromosome: 1.
OV277694.1:34964025-34964041
ATTAGATGAAAAACGAAATGAAATTCTACT34964025TTCATCACGCCAAATACAAAAATAAGTAGGTACAGTAAAAATATGCT
Anopheles bellator genome assembly, chromosome: 2.
OX030928.2:30687331-30687347
CAGAAGACACCCAAGGAAATTAGCATTCGA30687331TTCATCACGCCAAATACCTTTTCATCGCCACTGATGGATGATATGTT
Agriphila geniculea genome assembly, chromosome: 27.
OX038897.1:1730047-1730063
TGATGCATATTTAATAAATGAAAACAAACT1730047TTCATCACGCCAAATACGCGTTTCGAACACATGACTCGACAAAAACA
Chrysolina oricalcia genome assembly, chromosome: 7.
OX101815.2:6875442-6875458
TGATGGATCGGATGAAGAGGGTAAGAATTT6875442TTCATCACGCCAAATACATAAAGAGATATTAACGAAGCGATAGCCAT
Schistosoma rodhaini genome assembly, chromosome: 3.
OX103913.1:24317383-24317399
AGATATTTTACTCGCATGACAATCAGTGTG24317383TTCATCACGCCAAATACAAATCAAGAACATATATACAAAAACATTCG
Dicrocoelium dendriticum genome assembly, chromosome: 10.
OX104059.1:15138127-15138143
GGACACTTGTCAAAACGTTTAATATGACAT15138127TTCATCACGCCAAATACTGATTATCTGTCGGAATTTTGCACTCATGT
Euclidia mi genome assembly, chromosome: 7.
OX123187.2:68160007-68160023
CATTACACAAAACCAAAACACAGTTCTTCT68160007TTCATCACGCCAAATACGTAACTTCTCCAACCGCTGCTTTCATAGCC
Herminia tarsipennalis genome assembly, chromosome: 7.
OX243837.2:8450925-8450941
GGTCACGCGTTCAAGCGGTCTGCGGTCATG8450925TTCATCACGCCAAATACAAATGCGTCGCATTCTGACAGCGGCGGTCA
Drepana falcataria genome assembly, chromosome: 19.
OX243940.1:4290790-4290806
GGCAACACAAGAAGGCCCGGACATATATAT4290790TTCATCACGCCAAATACCTCACGGTGTAGGCAGAGAGAGAAGCACCT
Brachypalpus laphriformis genome assembly, chromosome: 2.
OX246754.1:102296502-102296518
ACACTGAATATCTTTAACAACTCAGATCGT102296502TTCATCACGCCAAATACAACAAAGCAACTGATTTGGCGATTGGAAAT
Brachypalpus laphriformis genome assembly, chromosome: 3.
OX246755.1:102695219-102695235
ACACTGAATATCTTCAACAACTCAGATCGT102695219TTCATCACGCCAAATACAACAAAACAACTGGTTTGGCGATTGGAGAT
Brachypalpus laphriformis genome assembly, chromosome: 4.
OX246756.1:154751785-154751801
ACACTGAATATCTTCAACAACTTAGATCGT154751785TTCATCACGCCAAATACAACAAAACAACTGATTTGGCGACTGGAGAT
Pyralis farinalis genome assembly, chromosome: 7.
OX382263.1:39788241-39788257
GCAACGTATGAGGTGTTGATGGAGAGTGAA39788241TTCATCACGCCAAATACTACATCTTATACACATAAGTCAGAAAGCAT
Tricholauxania praeusta genome assembly, chromosome: 3.
OX459030.1:42047232-42047248
CATACCTCCTGTAACAATGGGAAGCATGGT42047232TTCATCACGCCAAATACAAATTAAACCCATTATCACAGAAGGTTTGG
Chymomyza fuscimana genome assembly, chromosome: 2.
OX465089.1:41780112-41780128
GGGGCAACGCCTTTTTCTCTTTCCCAAACG41780112TTCATCACGCCAAATACCTTTTCAGGCCTTATAATCGGGCTCTGTAA
Polymixis flavicincta genome assembly, chromosome: 9.
OX465180.1:6866165-6866181
ACACTCAAATGTGAGGTGTGCCATAAGGCT6866165TTCATCACGCCAAATACCTTGAGGCTGCATATGGTGACGCATAGCGA
Alentia gelatinosa genome assembly, chromosome: 1.
OX465579.1:100885395-100885411
TCACTGGCCATGTCTGCCATCCCTGATTGC100885395TTCATCACGCCAAATACATCCTCGTTATTAGCGACTGTCATGTCTGA
Falcaria lacertinaria genome assembly, chromosome: 18.
OX602126.1:9178435-9178451
TATATTATATTATATACCTAATATGTACAT9178435TTCATCACGCCAAATACTTCACGGGTAGGCAGAGGGTATAGCGCGCC
Hyppa rectilinea genome assembly, chromosome: 4.
OX637304.1:13947225-13947241
AACGTGGAAGATCACAAAGGACATCTCGTC13947225TTCATCACGCCAAATACAAGTCTTCGTCAACCGCTGTCTTCGTCTCA
Parascotia fuliginaria genome assembly, chromosome: 5.
OY720175.1:2545399-2545415
ATGTAATACTAAAATGACGTAAGAGAATAA2545399TTCATCACGCCAAATACATATACCTACTATTATATTACAACACTTTA
Stenurella melanura genome assembly, chromosome: 10.
OY757318.1:22232143-22232159
GGTCTAAAATTATTTAAATAAATAAGTATT22232143TTCATCACGCCAAATACTCAACTGGTAAATTCAAACACCAAATCAAA
Alviniconcha strummeri genome assembly, chromosome: 3.
OY757543.1:19680150-19680166
GTGGATCAGTTTTAAATTGCCATCACCTGG19680150TTCATCACGCCAAATACTTCATCAGCTCTGTACTCACATAGGTTTCC
Eilema griseolum genome assembly, chromosome: 6.
OY759235.1:15044115-15044131
TTCAATAAGTCCTACCTAGAATTAAATTAT15044115TTCATCACGCCAAATACCATCTCTAATAGGTAGGTAGAAACATAATT
Rhamphomyia laevipes genome assembly, chromosome: 1.
OY987255.1:91362060-91362076
TTGGATACTAACAATTTTGCTATTGTTTAT91362060TTCATCACGCCAAATACCATTTTCTTCATAATTTGAATCAACATAAT
Rhamphomyia laevipes genome assembly, chromosome: 2.
OY987256.1:25769596-25769612
TTGGATACTAACAATGTTGCTATTGTTTAT25769596TTCATCACGCCAAATACCATTTTCTTCATCATTTGAATCAACATAAT
Dioctria rufipes genome assembly, chromosome: 2.
OZ002741.1:27212257-27212273
GGAGTTAGTGTGCCGAATACAAAATGAATT27212257TTCATCACGCCAAATACATGAAAGTGCTGCGTGGAATTACAAGGCCT
Dioctria linearis genome assembly, chromosome: 2.
OZ005741.1:31622354-31622370
GGAGTTAGTGTGCCGAATACAAAATGAATT31622354TTCATCACGCCAAATACATGGAAGTGCTGCGTGGAATTACAAGGCCT
Microdon myrmicae genome assembly, chromosome: 1.
OZ007496.1:196745899-196745915
TTCGATGACACACGTGGTAATGGTCACGGT196745899TTCATCACGCCAAATACCCTACAGAGTCTGGTTAAATCTCGACACCC
Microdon myrmicae genome assembly, chromosome: 1.
OZ007496.1:237355492-237355508
TTCGATGACACACGTGATAATGGTCACGGT237355492TTCATCACGCCAAATACCCTACAAAATCTGGTTAAATCTCTAAACCC
Microdon myrmicae genome assembly, chromosome: 2.
OZ007497.1:155413388-155413404
TTCGATGACACACGTGATAATGGTCACGGT155413388TTCATCACGCCAAATACCCTACAGAGTCTGGTTAAATCTCGACACCC
Microdon myrmicae genome assembly, chromosome: 2.
OZ007497.1:216277595-216277611
TTCGATGACACACGTGATAATGGTCACGGT216277595TTCATCACGCCAAATACCCTACAGAGTCTGGTTAAATCTCGACACCC
Microdon myrmicae genome assembly, chromosome: 3.
OZ007498.1:16908806-16908822
TTCGATGACACACGTGATAATGGTCACGGT16908806TTCATCACGCCAAATACCCTACAGAGTCTGGTCAAATCTCGACACCC
Microdon myrmicae genome assembly, chromosome: 4.
OZ007499.1:167301699-167301715
TTCGACGACACTTATGATAATGGTCACGGT167301699TTCATCACGCCAAATACCCTGCAAAACTTGTTAAATCTTGAAACCCT
Microdon myrmicae genome assembly, chromosome: 6.
OZ007502.1:114174668-114174684
TTCGACGACACACGTGATAATTATCACAAT114174668TTCATCACGCCAAATACCTTTCAGAACCTAGTTAAATCTCGAAACCC
Onchidella celtica genome assembly, chromosome: 15.
OZ007581.1:8579210-8579226
CAACATTGTCGAATGACTGAGCTTCTATGT8579210TTCATCACGCCAAATACGATCTATAGCAGAGATTACAAATTCAAAGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTCATCACGCCAAATAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCATCACGCCAAATAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.369 | 0.360 | search_plus_done; http://172.18.8.135:50400/match?q=TTCATCACGCCAAATAC&k=0&no_gap=0&offset=0&limit=50
0.440 | 0.071 | search_minus_done; http://172.18.8.135:50400/match?q=GTATTTGGCGTGATGAA&k=0&no_gap=0&offset=0&limit=0
0.440 | 0.000 | cgi_end;

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