GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-06 21:37:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Elaeis guineensis EST, clone (6lib)_isotig01932.
LM617665.1:872-895
ACTGCCCCAGCCTGTTATCAGTCAGCCTTG872TTCCATGGGCGAAGCTCTTGTACTCGCACCATGTGAACTCCCTATAGAGGCTCT
TSA: Elaeis guineensis isotig05994.Elguifruit mRNA sequence.
JO093246.1:359-382
ACTGCCCCAGCCTGTTATCAGTCAGCCTTG359TTCCATGGGCGAAGCTCTTGTACTCGCACCATGTGAACTCCCTATAGAGGCTCT
TSA: Elaeis guineensis isotig05995.Elguifruit mRNA sequence.
JO093247.1:350-373
ACTGCCCCAGCCTGTTATCAGTCAGCCTTG350TTCCATGGGCGAAGCTCTTGTACTCGCACCATGTGAACTCCCTATAGAGGCTCT
pOP-EO02202_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO02202 5', mRNA sequence.
EY409333.1:180-203
AGAGCCTCTATAGGGAGTTCACATGGTGCG180AGTACAAGAGCTTCGCCCATGGAACAAGGCTGACTGATAACAGGCTGGGGCAGT
pOP-EO03767_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO03767 5', mRNA sequence.
EY413643.1:154-177
AGAGCCTCTATAGGGAGTTCACATGGTGCG154AGTACAAGAGCTTCGCCCATGGAACAAGGCTGACTGATAACAGGCTGGGGCAGT
TSA: Elaeis guineensis EgEfMPOB00116 GA 2-oxidase 2 mRNA, complete cds, mRNA sequence.
EU284931.1:926-949
AGAGCCTCTATAGGGAGTTCACATGGTGCG926AGTACAAGAGCTTCGCCCATGGAACAAGGCTGACTGATAACAGGCTGGGGCAGT
Elaeis guineensis clone estEgSNP24 gibberellin 2-beta-dioxygenase (GA2ox) mRNA, complete cds.
JX438714.1:1742-1765
AGAGCCTCTATAGGGAGTTCACATGGTGCG1742AGTACAAGAGCTTCGCCCATGGAACAAGGCTGACTGATAACAGGCTGGGGCAGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTCCATGGGCGAAGCTCTTGTACT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCCATGGGCGAAGCTCTTGTACT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.208 | 0.199 | search_plus_done; http://172.18.8.135:50400/match?q=TTCCATGGGCGAAGCTCTTGTACT&k=0&no_gap=0&offset=0&limit=50
0.332 | 0.124 | search_minus_done; http://172.18.8.135:50400/match?q=AGTACAAGAGCTTCGCCCATGGAA&k=0&no_gap=0&offset=0&limit=47
0.335 | 0.003 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).