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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-08 05:44:17, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Martes martes genome assembly, chromosome: 8.
OY734070.1:62315173-62315193
ATCTGACAAATATTTATGACTTTCCCTCCC62315173TTCCTACAGCCTCCTCTGAAATTCCTTTCATCTAAAGAAGTGGAATGGGAT
Mdrtp1005A01_e37706.g1 Apple_EST_Mdrtp Malus domestica x Malus sieversii cDNA 5' similar to ref|NP_178064.1| ent-kaurene synthase (ent-kaurene synthetase B) (KS) [Arabidopsis thaliana] pir|G96825 hypo
GO561727.1:453-473
TGAGTCGATACAGATGATCAAATTCGGAAC453TTCCTACAGCCTCCTCTGAAAGCTTAGGCCCAACCAAATAGAGAGCTGGAA
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141919.1:32828319-32828339
TAAGTCGATACAGATGATGGAATTCGGAAC32828319TTCCTACAGCCTCCTCTGAAAGCTTAGGCCCAACCAAATAGAGAGCTGGAA
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:34149103-34149123
TAAGTCGATACAGATGATGGAATTCGGAAC34149103TTCCTACAGCCTCCTCTGAAAGCTGAGGCCCAACCAAATAGAGAGCTGGAA
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:34222420-34222440
TGAGTCGATACAGATGATCAAATTCGGAAC34222420TTCCTACAGCCTCCTCTGAAAGCTTAGGCCCAACCAAATAGAGAGCTGGAA
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141962.1:31632581-31632601
TAAGTCGATACAGATGATGGAATTCGGAAC31632581TTCCTACAGCCTCCTCTGAAAGCTTAGGCCCAACCAAATAGAGAGCTGGAA
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141979.1:32127428-32127448
TAAGTCGATACAGATGATGGAATTCGGAAC32127428TTCCTACAGCCTCCTCTGAAAGCTTAGGCCCAACCAAATAGAGAGCTGGAA
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143367.1:34398086-34398106
TAAGTCGATACAGATGATGGAATTCGGAAC34398086TTCCTACAGCCTCCTCTGAAAGCTGAGGCCCAACCAAATAGAGAGCTGGAA
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143367.1:34434956-34434976
TGAGTCGATACAGATGATCAAATTCGGAAC34434956TTCCTACAGCCTCCTCTGAAAGCTTAGGCCCAACCAAATAGAGAGCTGGAA
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143384.1:30795467-30795487
TAAGTCGATACAGATGATGGAATTCGGAAC30795467TTCCTACAGCCTCCTCTGAAAGCTTAGGCCCAACCAAATAGAGAGCTGGAA
Malus sylvestris genome assembly, chromosome: 10.
OU696512.1:33380737-33380757
TAAGAAGATACAGATGATGGAATTCGGAAC33380737TTCCTACAGCCTCCTCTGAAAGCTTAGGCCCAACCAAATAGAGAGCTGGAA
Malus sylvestris genome assembly, chromosome: 10.
OU696512.1:33391033-33391053
TGAGTCGATACAGATGATCAAATTCGGAAC33391033TTCCTACAGCCTCCTCTGAAAGCTTAGGCCCAACCAAATAGAGAGCTGGAA
Malus domestica genome assembly, chromosome: 10.
OU696686.1:33560388-33560408
TAAGTCGATACAGATGAAGGAATTCGGAAC33560388TTCCTACAGCCTCCTCTGAAAGCTGAGGCCCAACCAAATAGAGAGCTGGAA
Malus domestica genome assembly, chromosome: 10.
OU696686.1:33633700-33633720
TGAGTCGATACAGATGATCAAATTCGGAAC33633700TTCCTACAGCCTCCTCTGAAAGCTTAGGCCCAACCAAATAGAGAGCTGGAA
Malus domestica genome assembly, chromosome: 10.
OU744551.1:33491943-33491963
TAAGAAGATACAGATGATGGAATTCGGAAC33491943TTCCTACAGCCTCCTCTGAAAGCTTAGGCCCAACCAAATAGAGAGCTGGAA
Malus domestica genome assembly, chromosome: 10.
OU744551.1:33502255-33502275
TGAGTCGATACAGATGATCAAATTCGGAAC33502255TTCCTACAGCCTCCTCTGAAAGCTTAGGCCCAACCAAATAGAGAGCTGGAA
Malus domestica genome assembly, chromosome: 10.
OU744962.1:34477399-34477419
TAAGAAGATACAGATGATGGAATTCGGAAC34477399TTCCTACAGCCTCCTCTGAAAGCTTAGGCCCAACCAAATAGAGAGCTGGAA
Malus domestica genome assembly, chromosome: 10.
OU744962.1:34487694-34487714
TGAGTCGATACAGATGATCAAATTCGGAAC34487694TTCCTACAGCCTCCTCTGAAAGCTTAGGCCCAACCAAATAGAGAGCTGGAA
Malus domestica genome assembly, chromosome: 10.
OU745000.1:33315985-33316005
TAAGAAGATACAGATGATGGAATTCGGAAC33315985TTCCTACAGCCTCCTCTGAAAGCTTAGGCCCAACCAAATAGAGAGCTGGAA
Malus domestica genome assembly, chromosome: 10.
OU745000.1:33326297-33326317
TGAGTCGATACAGATGATCAAATTCGGAAC33326297TTCCTACAGCCTCCTCTGAAAGCTTAGGCCCAACCAAATAGAGAGCTGGAA
Malus x robusta genome assembly, chromosome: 4.
OY720328.1:31957948-31957968
TAAGTCGATACAGATGATGGAATTCGGAAC31957948TTCCTACAGCCTCCTCTGAAAGCTTAGGCCCAACCAAATAGAGAGCTGGAA
Crataegus laevigata genome assembly, chromosome: 4.
OY756941.1:31953799-31953819
TAAGTCGATACAGATGATGGAATTCGGAAC31953799TTCCTACAGCCTCCTCTGAAAGCTTAGGCCCAACCAAATAGAGAGCTGGAA
Crataegus laevigata genome assembly, chromosome: 4.
OY756941.1:32027235-32027255
TGAGTCGATACAGATGATCAAATTCGGAAC32027235TTCCTACAGCCTCCTCTGAAAGCTTAGGTCCAACCAAATAGAGAGCTGGAA
Pyrus communis genome assembly, chromosome: 3.
OY757070.1:22770514-22770534
TGAGTCGATACAGATGATCAAATTCGGAAC22770514TTCCTACAGCCTCCTCTGAAAGCTTAGGCCCAACCAAATAGAGAGCTGGAA
Mdrtb1024N13.g1 Apple_EST_Mdrtb Malus domestica cDNA 5' similar to ref|NP_178064.1| ent-kaurene synthase (ent-kaurene synthetase B) (KS) [Arabidopsis thaliana] pir|G96825 hypothetical protein T8K14.12
GO516514.1:325-345
TTCCAGCTCTCTATTTGGTTGGGCCTAAGC325TTTCAGAGGAGGCTGTAGGAAGTTCCGAATTTGATCATCTGTATCGACTCA
TSA: Pyrus x bretschneideri Unigene76029_XinShao mRNA sequence.
JR661358.1:171-191
TTCCAGCTCTCTATTTGGTTGGGCCTCAGC171TTTCAGAGGAGGCTGTAGGAAGTTCCGAATTTGATCATCTGTATCGACTCA
Pyrus communis ent-kaurene synthase mRNA, complete cds.
JF441169.1:1817-1837
TTCCAGCTCTCTATTTGGTTGGGCCTAAGC1817TTTCAGAGGAGGCTGTAGGAAGTTCCGAATTTGATCATCTGTATCGACTCA
Malus x domestica ent-kaurene synthase (KS) mRNA, complete cds.
JQ281521.1:1817-1837
TTCCAGCTCTCTATTTGGTTGGGCCTAAGC1817TTTCAGAGGAGGCTGTAGGAAGTTCCGAATTTGATCATCTGTATCGACTCA
Malus domestica ent-kaurene synthase (KS) mRNA, complete cds.
KF437681.1:1817-1837
TTCCAGCTCTCTATTTGGTTGGGCCTAAGC1817TTTCAGAGGAGGCTGTAGGAAGTTCCGAATTTGATCATCTGTATCGACTCA
Pinus koraiensis ent-kaurene synthase (KS) mRNA, complete cds.
MG764440.1:1859-1879
TTCCAGCTCTCTATTTGGTTGGGCCTAAGC1859TTTCAGAGGAGGCTGTAGGAAGTTGCCAATTTGATCATCTGTATCGACTCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTCCTACAGCCTCCTCTGAAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCCTACAGCCTCCTCTGAAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.178 | 0.169 | search_plus_done; http://172.18.8.135:50400/match?q=TTCCTACAGCCTCCTCTGAAA&k=0&no_gap=0&offset=0&limit=50
0.330 | 0.152 | search_minus_done; http://172.18.8.135:50400/match?q=TTTCAGAGGAGGCTGTAGGAA&k=0&no_gap=0&offset=0&limit=26
0.334 | 0.004 | cgi_end;

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