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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-05 06:48:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Eptesicus nilssonii genome assembly, chromosome: 14.
OX621293.1:1088668-1088687
CAGCTGCTCTCTGCTCTCGCCCTCTCAGTC1088668TTCCTTCAACACAACAGCCAGAGGATCGCGTTGAAAATCAAATCAGCAAT
Solea solea genome assembly, chromosome: 10.
OY282543.1:17805883-17805902
AAGAAGTCAGGTAAGAACACGTTCATCCGT17805883TTCCTTCAACACAACAGCCAAGCAGTGAGATTATAGCTGTCCACCTCATG
Sequence 78408 from patent US 7365185.
EA699529.1:1521-1540
CTAAATACTCGTATACCAAAATTCGATTGT1521TTCCTTCAACACAACAGCCAATTAATTCAACAAGGTTGGGATGCTTCACA
Sequence 81696 from patent US 7365185.
EA702817.1:2048-2067
CTAAATACTCGTATACCAAAATTCGATTGT2048TTCCTTCAACACAACAGCCAATTAATTCAACAAGGTTGGGATGCTTCACA
Sequence 78408 from patent US 7790958.
GX564383.1:1521-1540
CTAAATACTCGTATACCAAAATTCGATTGT1521TTCCTTCAACACAACAGCCAATTAATTCAACAAGGTTGGGATGCTTCACA
Sequence 81696 from patent US 7790958.
GX567671.1:2048-2067
CTAAATACTCGTATACCAAAATTCGATTGT2048TTCCTTCAACACAACAGCCAATTAATTCAACAAGGTTGGGATGCTTCACA
Sequence 6492 from patent US 7868149.
GX910584.1:2050-2069
CTAAATACTCGTATACCAAAATTCGATTGT2050TTCCTTCAACACAACAGCCAATTAATTCAACAAGGTTGGGATGCTTCACA
Sequence 42670 from patent US 7868149.
GX946762.1:2048-2067
CTAAATACTCGTATACCAAAATTCGATTGT2048TTCCTTCAACACAACAGCCAATTAATTCAACAAGGTTGGGATGCTTCACA
Sequence 68417 from patent US 7868149.
GX972509.1:1521-1540
CTAAATACTCGTATACCAAAATTCGATTGT1521TTCCTTCAACACAACAGCCAATTAATTCAACAAGGTTGGGATGCTTCACA
uncultured Sunxiuqinia sp. isolate 265086c5-4c6e-4d68-95d9-2f43da8c74dd genome assembly, chromosome: 3.
OY781911.1:24490-24509
ACTTGGATGGCTCTAACTTTTATCCTGATT24490TTCCTTCAACACAACAGCCACACCTCGATAAATTAAATCCATTTCAAATC
nbxb0035N02f CUGI Rice BAC Library Oryza sativa Japonica Group genomic clone nbxb0035N02f, genomic survey sequence.
AQ289873.1:296-315
CTAAATACTCGTATACCAAAATTCGATTGT296TTCCTTCAACACAACAGCCAATTAATTCAACAAGGTTGGGATGCTTCACA
OA_BBa0126O07.r OA_BBa Oryza alta genomic clone OA_BBa0126O07 3', genomic survey sequence.
CZ441713.1:263-282
CTAAATACTCGTATACCAAAATTCGATTGT263TTCCTTCAACACAACAGCCAATTAATTCAACAAGGTTGGGATGCTTCACA
OR__Ba0028E16.r OR__Ba Oryza rufipogon genomic clone OR__Ba0028E16 3', genomic survey sequence.
EI232843.1:296-315
CTAAATACTCGTATACCAAAATTCGATTGT296TTCCTTCAACACAACAGCCAATTAATTCGACAAGGTTGGGATGCTTCACA
OR__Ba0061E09.r OR__Ba Oryza rufipogon genomic clone OR__Ba0061E09 3', genomic survey sequence.
EI256774.1:296-315
CTAAATACTCGTATACCAAAATTCGATTGT296TTCCTTCAACACAACAGCCAATTAATTCGACAAGGTCGGGATGCTTCACA
OM_ABa0007G23.r OM_ABa Oryza meridionalis genomic clone OM_ABa0007G23 3', genomic survey sequence.
JM130652.1:299-318
TAAATACTCGTATACCAAAATTCGATTGTT299TTCCTTCAACACAACAGCCAATTAATTCGACAAGGTTGGGATGCTTTCAC
a0074O19.f OSI9B Oryza sativa Indica Group genomic clone a0074O19 5', genomic survey sequence.
JY236938.1:296-315
CTAAATACTCGTATACCAAAATTCGATTGT296TTCCTTCAACACAACAGCCAATTAATTCAACAAGGTTGGGATGCTTCACA
OB_ABa0002A02.f OB_ABa Oryza barthii genomic clone OB_ABa0002A02 5', genomic survey sequence.
KS451136.1:284-303
CTAAATACTCGTATACCAAAATTCGATTGT284TTCCTTCAACACAACAGCCAATTAATTCAACAAGGTTGGGATGCTTCACA
OB_ABa0010G08.f OB_ABa Oryza barthii genomic clone OB_ABa0010G08 5', genomic survey sequence.
KS457033.1:299-318
CTAAATACTCGTATACCAAAATTCGATTGT299TTCCTTCAACACAACAGCCAATTAATTCAACAAGGTTGGGATGCTTCACA
OB_ABa0043F04.f OB_ABa Oryza barthii genomic clone OB_ABa0043F04 5', genomic survey sequence.
KS480554.1:293-312
CTAAATACTCGTATACCAAAATTCGATTGT293TTCCTTCAACACAACAGCCAATTAATTCAACAAGGTTGGGATGCTTCACA
OSJKBa0011I17.R OSJKBa Oryza sativa genomic 3', genomic survey sequence.
KS726629.1:258-277
CTAAATACTCGTATACCAAAATTCGATTGT258TTCCTTCAACACAACAGCCAATTAATTCAACAAGGTTGGGATGCTTCACA
OSJKBa0046N16.F OSJKBa Oryza sativa genomic 5', genomic survey sequence.
KS727302.1:295-314
CTAAATACTCGTATACCAAAATTCGATTGT295TTCCTTCAACACAACAGCCAATTAATTCAACAAGGTTGGGATGCTTCACA
OSJKBa0047K22.F OSJKBa Oryza sativa genomic 5', genomic survey sequence.
KS738544.1:296-315
CTAAATACTCGTATACCAAAATTCGATTGT296TTCCTTCAACACAACAGCCAATTAATTCAACAAGGTTGGGATGCTTCACA
Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0017I01.
AL606456.2:23697-23716
CTAAATACTCGTATACCAAAATTCGATTGT23697TTCCTTCAACACAACAGCCAATTAATTCAACAAGGTTGGGATGCTTCACA
Oryza sativa genomic DNA, chromosome 4, BAC clone: H0801D08.
AL732353.1:61202-61221
CTAAATACTCGTATACCAAAATTCGATTGT61202TTCCTTCAACACAACAGCCAATTAATTCAACAAGGTTGGGATGCTTCACA
Oryza sativa Japonica Group DNA, chromosome 4, cultivar: Nipponbare, complete sequence.
AP014960.1:34683002-34683021
CTAAATACTCGTATACCAAAATTCGATTGT34683002TTCCTTCAACACAACAGCCAATTAATTCAACAAGGTTGGGATGCTTCACA
Oryza sativa indica subgroup Inn Ma Yebaw DNA, chromosome: 4.
AP027388.1:33615750-33615769
CTAAATACTCGTATACCAAAATTCGATTGT33615750TTCCTTCAACACAACAGCCAATTAATTCAACAAGGTTGGGATGCTTCACA
Oryza sativa Indica Group cultivar RP Bio-226 chromosome 4 sequence.
CP012612.1:31773945-31773964
CTAAATACTCGTATACCAAAATTCGATTGT31773945TTCCTTCAACACAACAGCCAATTAATTCAACAAGGTTGGGATGCTTCACA
Oryza sativa Indica Group cultivar Shuhui498 chromosome 4, partial sequence.
CP018160.1:34949350-34949369
CTAAATACTCGTATACCAAAATTCGATTGT34949350TTCCTTCAACACAACAGCCAATTAATTCAACAAGGTTGGGATGCTTCACA
Oryza sativa Indica Group cultivar Minghui 63 chromosome 4.
CP054679.1:36427089-36427108
CTAAATACTCGTATACCAAAATTCGATTGT36427089TTCCTTCAACACAACAGCCAATTAATTCAACAAGGTTGGGATGCTTCACA
Oryza sativa Indica Group cultivar Zhenshan 97 chromosome 4.
CP056055.1:36362271-36362290
CTAAATACTCGTATACCAAAATTCGATTGT36362271TTCCTTCAACACAACAGCCAATTAATTCAACAAGGTTGGGATGCTTCACA
Oryza sativa Japonica Group cultivar Changxianggeng 1813 chromosome 10.
CP101150.1:34274622-34274641
CTAAATACTCGTATACCAAAATTCGATTGT34274622TTCCTTCAACACAACAGCCAATTAATTCAACAAGGTTGGGATGCTTCACA
Oryza sativa Japonica Group cultivar Nipponbare isolate AGIS-1.0 chromosome 4.
CP132238.1:35202884-35202903
CTAAATACTCGTATACCAAAATTCGATTGT35202884TTCCTTCAACACAACAGCCAATTAATTCAACAAGGTTGGGATGCTTCACA
Oryza sativa indica subgroup cultivar ZH8015 chromosome 04.
CP141111.1:36626978-36626997
CTAAATACTCGTATACCAAAATTCGATTGT36626978TTCCTTCAACACAACAGCCAATTAATTCAACAAGGTTGGGATGCTTCACA
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141919.1:31002065-31002084
CAAGGTAGTTGTAGACCAGAATTCTTTGGT31002065TTCCTTCAACACAACAGCCATAGAGCTTAACTAGATTTTCATGCTCGATT
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:32588320-32588339
CAAGGTAGTTGTAGACCAGAATTCTTTGGT32588320TTCCTTCAACACAACAGCCATAGAGCTTAACTAGATTTTCATGCTCGATT
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141962.1:30021729-30021748
CAAGGTAGTTGTAGACCAGAATTCTTTGGT30021729TTCCTTCAACACAACAGCCATAGAGCTTAACTAGATTTTCATGCTCGATT
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141979.1:30509173-30509192
CAAGGTAGTTGTAGACCAGAATTCTTTGGT30509173TTCCTTCAACACAACAGCCATAGAGCTTAACTAGATTTTCATGCTCGATT
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143362.1:34200353-34200372
CGAGGTAGTTGTAGACCAGAATTCTTTGGT34200353TTCCTTCAACACAACAGCCAAAGAGCTCAACTAGATTTTCATGCTTTATT
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143367.1:32034779-32034798
CAAGGTAGTTGTAGACCAGAATTCTTTGGT32034779TTCCTTCAACACAACAGCCATAGAGCTTAACTAGATTTTCATGCTCGATT
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143379.1:31653647-31653666
CGAGGTAGTTGTAGACCAGAATTCTTTGGT31653647TTCCTTCAACACAACAGCCAAAGAGCTCAACTAGATTTTCATGCTTTATT
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143384.1:29244686-29244705
CAAGGTAGTTGTAGACCAGAATTCTTTGGT29244686TTCCTTCAACACAACAGCCATAGAGCTTAACTAGATTTTCATGCTCGATT
Malus sylvestris genome assembly, chromosome: 5.
OU696507.1:34015956-34015975
CGAGGTAGTTGTAGACCAGAATTCTTTGGT34015956TTCCTTCAACACAACAGCCAAAGAGCTCAACTAGATTTTCATGCTTTATT
Malus sylvestris genome assembly, chromosome: 10.
OU696512.1:31781707-31781726
CAAGGTAGTTGTAGACCAGAATTCTTTGGT31781707TTCCTTCAACACAACAGCCATAGAGCTTAACTAGATTTTCATGCTCGATT
Malus domestica genome assembly, chromosome: 5.
OU696681.1:33531354-33531373
CGAGGTAGTTGTAGACCAGAATTCTTTGGT33531354TTCCTTCAACACAACAGCCAAAGAGCTCAACTAGATTTTCATGCTTTATT
Malus domestica genome assembly, chromosome: 10.
OU696686.1:31810752-31810771
CAAGGTAGTTGTAGACCAGAATTCTTTGGT31810752TTCCTTCAACACAACAGCCATAGAGCTTAACTAGATTTTCATGCTCGATT
Malus domestica genome assembly, chromosome: 5.
OU744546.1:33154423-33154442
CGAGGTAGTTGTAGACCAGAATTCTTTGGT33154423TTCCTTCAACACAACAGCCAAAGAGCTCAACTAGATTTTCATGCTTTATT
Malus domestica genome assembly, chromosome: 10.
OU744551.1:31960993-31961012
CAAGGTAGTTGTAGACCAGAATTCTTTGGT31960993TTCCTTCAACACAACAGCCATAGAGCTTAACTAGATTTTCATGCTCGATT
Malus domestica genome assembly, chromosome: 5.
OU744957.1:33727821-33727840
CGAGGTAGTTGTAGACCAGAATTCTTTGGT33727821TTCCTTCAACACAACAGCCAAAGAGCTCAACTAGATTTTCATGCTTTATT
Malus domestica genome assembly, chromosome: 10.
OU744962.1:32712659-32712678
CAAGGTAGTTGTAGACCAGAATTCTTTGGT32712659TTCCTTCAACACAACAGCCATAGAGCTTAACTAGATTTTCATGCTCGATT
Malus domestica genome assembly, chromosome: 5.
OU744995.1:34737264-34737283
CGAGGTAGTTGTAGACCAGAATTCTTTGGT34737264TTCCTTCAACACAACAGCCAAAGAGCTCAACTAGATTTTCATGCTTTATT
Malus domestica genome assembly, chromosome: 10.
OU745000.1:31785035-31785054
CAAGGTAGTTGTAGACCAGAATTCTTTGGT31785035TTCCTTCAACACAACAGCCATAGAGCTTAACTAGATTTTCATGCTCGATT
Oryza sativa genome assembly, chromosome: 4.
OX637249.1:29236589-29236608
CTAAATACTCGTATACCAAAATTCGATTGT29236589TTCCTTCAACACAACAGCCAATTAATTCAACAAGGTTGGGATGCTTCACA
Verbena officinalis genome assembly, chromosome: 2.
OY292386.1:4762580-4762599
CCATGTACTCGTAGACTAAAATTAAGTGAT4762580TTCCTTCAACACAACAGCCATAGAGCTTTACTAGATTTGGATGCTGCAAT
Malus x robusta genome assembly, chromosome: 4.
OY720328.1:30119813-30119832
CAAGGTAGTTGTAGACCAGAATTCTTTGGT30119813TTCCTTCAACACAACAGCCATAGAGCTTAACTAGATTTTCATGCTCGATT
Pyrus communis genome assembly, chromosome: 3.
OY757070.1:21430410-21430429
CTAGGTAGTTGTAGACCAGAATTCTTTGGT21430410TTCCTTCAACACAACAGCCATAGAGCTTAACTAGATTTTCATGCTCGATT
Verbascum thapsus genome assembly, chromosome: 2.
OY770105.1:3452176-3452195
CCATATATTCATATATTATCATTAAATGAT3452176TTCCTTCAACACAACAGCCATAAAGCTTCACTAGATTGGGGTGTTGCAAT
Galeopsis tetrahit genome assembly, chromosome: 12.
OY776130.1:45294307-45294326
CCATGTACTCATAAACGATCATTAAATGAT45294307TTCCTTCAACACAACAGCCATATAGCTTTACTAAATTCGGGTGTTGCAAT
Lepidium didymum genome assembly, chromosome: 2.
OY986992.1:2579977-2579996
CCAAATACTCATACACCAATATTAACTGGT2579977TTCCTTCAACACAACAGCCATATAGCTTCACAAGATTTGGATGTTGTAGT
Lepidium didymum genome assembly, chromosome: 3.
OY986993.1:2445989-2446008
CCAAATACTCATACACCAATATTAACTGGT2445989TTCCTTCAACACAACAGCCATATAGCTTCACAAGATTTGGATGTTGGAGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTCCTTCAACACAACAGCCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTCCTTCAACACAACAGCCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.666 | 0.657 | search_plus_done; http://172.18.8.135:50400/match?q=TTCCTTCAACACAACAGCCA&k=0&no_gap=0&offset=0&limit=50
0.722 | 0.056 | search_minus_done; http://172.18.8.135:50400/match?q=TGGCTGTTGTGTTGAAGGAA&k=0&no_gap=0&offset=0&limit=0
0.722 | 0.000 | cgi_end;

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