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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-08 04:37:47, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Argentina silus genome assembly, chromosome: 15.
OX637382.1:7853454-7853475
CTAGTCACTGTTGTATGCATTAATTACGGA7853454TTGAGCCAATGCTTTCTCTATGGGAGTCAGCCATTGACGGACAACGAAGATG
Mdrta1016F12_e35205.g1 Apple_EST_Mdrta Malus domestica cDNA 5' similar to gb|AAF26738.2|AF220453_1 beta-ketoacyl-ACP synthase II [Elaeis guineensis], mRNA sequence.
GO548586.1:544-565
GTAATTCACATCTTCTCTGTTGACCCCGGA544TTGAGCCAATGCTTTCTCTATGCAAAGAGCAACTCCTGTCCCGTCAGGATGA
Malus hybrid cultivar cultivar SH6 chromosome 9.
CP143366.1:15157723-15157744
GTAATTCACATCTTCTCTGTTGACCCCAGA15157723TTGAGCCAATGCTTTCTCTATGCAAAGAGCAACTCCTGTCCCTGGTTTTAGA
Malus hybrid cultivar cultivar SH6 chromosome 9.
CP143383.1:13474763-13474784
GTAATTCACATCTTCTCTGTTGACCCCAGA13474763TTGAGCCAATGCTTTCTCTATGCAAAGAGCAACTCCAGTCCCTGGTTTTAGG
Malus sylvestris genome assembly, chromosome: 9.
OU696511.1:15136227-15136248
GTAATTCACATCTTCTCTGTTGACCCCAGA15136227TTGAGCCAATGCTTTCTCTATGCAAAGAGCAACTCCTGTCCCTGGTTTTAGA
Malus domestica genome assembly, chromosome: 9.
OU696685.1:15149729-15149750
GTAATTCACATCTTCTCTGTTGACCCCAGA15149729TTGAGCCAATGCTTTCTCTATGCAAAGAGCAACTCCTGTCCCTGGTTTTAGA
Malus domestica genome assembly, chromosome: 9.
OU744550.1:15237856-15237877
GTAATTCACATCTTCTCTGTTGACCCCAGA15237856TTGAGCCAATGCTTTCTCTATGCAAAGAGCAACTCCTGTCCCTGGTTTTAGA
Malus domestica genome assembly, chromosome: 9.
OU744961.1:15111864-15111885
GTAATTCACATCTTCTCTGTTGACCCCAGA15111864TTGAGCCAATGCTTTCTCTATGCAAAGAGCAACTCCTGTCCCTGGTTTTAGA
Malus domestica genome assembly, chromosome: 9.
OU744999.1:14701692-14701713
GTAATTCACATCTTCTCTGTTGACCCCAGA14701692TTGAGCCAATGCTTTCTCTATGCAAAGAGCAACTCCTGTCCCTGGTTTTAGA
Malus x robusta genome assembly, chromosome: 8.
OY720332.1:14822074-14822095
GTAATTCACATCTTCTCTGTTGACCCCAGA14822074TTGAGCCAATGCTTTCTCTATGCAAAGAGCAACTCCTGTCCCTGGTTTTAGA
Pyrus communis genome assembly, chromosome: 7.
OY757074.1:11466473-11466494
GTAATTCACATCTTCTCTGTTGACCCCAGA11466473TTGAGCCAATGCTTTCTCTATGCAAAGAGCAACTCCTGTCCCTGGTTTTAGA
Malus hybrid cultivar cultivar Flame chromosome 9.
CP141918.1:19787781-19787802
TCTAAAACCAGGGACAGGAGTTGCTCTTTG19787781CATAGAGAAAGCATTGGCTCAATCTGGGGTCAACAGAGAAGATGTGAATTAC
Malus hybrid cultivar cultivar Flame chromosome 9.
CP141935.1:20724621-20724642
TCTAAAACCAGGGACAGGAGTTGCTCTTTG20724621CATAGAGAAAGCATTGGCTCAATCTGGGGTCAACAGAGAAGATGTGAATTAC
Malus hybrid cultivar cultivar Royalty chromosome 6.
CP141958.1:20165404-20165425
TCTAAAACCAGGGACAGGAGTTGCTCTTTG20165404CATAGAGAAAGCATTGGCTCAATCTGGGGTCAACAGAGAAGATGTGAATTAC
Malus hybrid cultivar cultivar Royalty chromosome 6.
CP141975.1:20896071-20896092
TCTAAAACCAGGGACAGGAGTTGCTCTTTG20896071CATAGAGAAAGCATTGGCTCAATCTGGGGTCAACAGAGAAGATGTGAATTAC
Crataegus laevigata genome assembly, chromosome: 17.
OY756954.1:17294123-17294144
TCTAAAACCAGGGACAGGAGTTGCTCTTTG17294123CATAGAGAAAGCATTGGCTCAATCTGGGGTCAACAGAGAAGATGTGAATTAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGAGCCAATGCTTTCTCTATG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGAGCCAATGCTTTCTCTATG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.233 | 0.224 | search_plus_done; http://172.18.8.135:50400/match?q=TTGAGCCAATGCTTTCTCTATG&k=0&no_gap=0&offset=0&limit=50
0.260 | 0.027 | search_minus_done; http://172.18.8.135:50400/match?q=CATAGAGAAAGCATTGGCTCAA&k=0&no_gap=0&offset=0&limit=39
0.263 | 0.003 | cgi_end;

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