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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 08:12:13, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

KS26036F04 KS26 Capsicum annuum cDNA, mRNA sequence.
GD133001.1:204-223
AATGTCTTCTTCTGATCTGCTGTTTCCTTT204TTGGAGGAAGTGGTGCTTCTCCATTTCCAGGGAATTCCCATTTGACAACA
TSA: Capsicum annuum MGMT_Contig5142, mRNA sequence.
JW055386.1:501-520
AATGTCTTCTTCTGATCTGCTGTTTCCTTT501TTGGAGGAAGTGGTGCTTCTCCATTTCCAGGGAATTCCCATTTGACAACA
Capsicum annuum Takanotsume DNA, chromosome 6, sequence.
AP026701.1:1293900-1293919
AATGTCTTCTTCTGATCTGCTGTTTCCTTT1293900TTGGAGGAAGTGGTGCTTCTCCATTTCCAGGGAATTCCCATTTGACAACA
Amedibacterium intestinale JCM 30884 DNA, complete genome.
AP019695.1:1251296-1251315
TTTATGATTAGTACATTCCACCTTGTGGCA1251296TTGGAGGAAGTGGTGCTTCTTTTTCTTTCATAGATGCAACACCTGCTTCA
Amedibacterium intestinale DNA, complete genome.
AP019711.1:1353917-1353936
TTTATGATTAGTACATTCCACCTTGTGGCA1353917TTGGAGGAAGTGGTGCTTCTTTTTCTTTCATAGATGCAACACCTGCTTCA
Podarcis cretensis genome assembly, chromosome: 6.
OX638154.1:1672795-1672814
CCCTCCTGTGGTTTCCGGCTATATGTATTC1672795AGAAGCACCACTTCCTCCAAATGTGGAGGCAGAGCAGAGCCAACCTGGCT
KS24024G12 KS24 Capsicum annuum cDNA, mRNA sequence.
GD120160.1:578-597
TGTTGTCAAATGGGAATTCCCTGGAAATGG578AGAAGCACCACTTCCTCCAAAAAGGAAACAGCAGATCAGAAGAAGACATT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 6.
CP124726.1:254384706-254384725
TGTTGTCAAATGGGAATTCCCTGGAAATGG254384706AGAAGCACCACTTCCTCCAAAAAGGAAACAGCAGATCAGAAGAAGACATT
Sulfurospirillum halorespirans DSM 13726 chromosome, complete genome.
CP017111.1:2596644-2596663
ATCATTCCCATCGCCACCATAAAGGGTATT2596644AGAAGCACCACTTCCTCCAATCATCGTATCATCGCCAACGGTTCCATAGA
Harmonia axyridis genome assembly, chromosome: 4.
OU611930.1:12273676-12273695
GAACTCACCAACCGCATAAAGTTTAGGGAG12273676AGAAGCACCACTTCCTCCAAATACTACAGACGTAATACTTAAATGTCTTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGGAGGAAGTGGTGCTTCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGGAGGAAGTGGTGCTTCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.218 | 0.209 | search_plus_done; http://172.18.8.135:50400/match?q=TTGGAGGAAGTGGTGCTTCT&k=0&no_gap=0&offset=0&limit=50
0.354 | 0.136 | search_minus_done; http://172.18.8.135:50400/match?q=AGAAGCACCACTTCCTCCAA&k=0&no_gap=0&offset=0&limit=45
0.357 | 0.003 | cgi_end;

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