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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-17 15:55:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Haemophilus parainfluenzae strain M1C152_1 chromosome, complete genome.
CP063111.1:1139066-1139085
CGTTTTAGAGACAGATTTAGAAAACGAGCA1139066TTTAAGCATCCAATGGCAAAATAATGTGCCTGTGATTCATTACTATCATT
Haemophilus parainfluenzae strain M1C149_1 chromosome, complete genome.
CP063112.1:1149373-1149392
CGTTTTAGAAACAGATTTAGAAAACGAGCA1149373TTTAAGCATCCAATGGCAAAATAATGTGCCTGTGATTCATTACTATCATT
Haemophilus parainfluenzae strain M1C125_4 chromosome, complete genome.
CP063122.1:1095622-1095641
CGTTTTAGAAACAGATTTAGAAAATGAGCA1095622TTTAAGCATCCAATGGCAAAATAATGTGCCAGTGATTCATTACTATCATT
Glyphotaelius pellucidus genome assembly, chromosome: 11.
OW386548.1:11890450-11890469
CTATTTGTGCTTTTAATAATAATGAGTTGA11890450TTTAAGCATCCAATGGCAAACTTCAGTCCATTTGCAGGTGTAACGGTAAT
TSA: Allium cepa CUDHLF2_10676 mRNA sequence.
JR853494.1:100-119
ACAACAACAATGCAAACATACTCGAATTCC100TTTGCCATTGGATGCTTAAATCCATTTCCTTCTTCTGATGCTCTCGTTTT
Haemophilus parainfluenzae strain M27794 chromosome, complete genome.
CP031477.1:284395-284414
AATGATAATAATGAATCACAGGCACATTAT284395TTTGCCATTGGATGCTTAAATGCTCGTTTTCTAAATCTGTTTCTAAAACG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTTAAGCATCCAATGGCAAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTAAGCATCCAATGGCAAA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.094 | 0.085 | search_plus_done; http://172.18.8.135:50400/match?q=TTTAAGCATCCAATGGCAAA&k=0&no_gap=0&offset=0&limit=50
0.120 | 0.026 | search_minus_done; http://172.18.8.135:50400/match?q=TTTGCCATTGGATGCTTAAA&k=0&no_gap=0&offset=0&limit=46
0.122 | 0.001 | cgi_end;

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