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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-04 04:39:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Coffea arabica EST, clone Ca_Lea01_04A10.
AM232218.1:86-109
ACGACTCATCAGGGATCGTTCAGGTGCAGG86TTTCACCGCTCCAATTCTACTGCCTATTTCAAGAGATCAAAGTCCATGCCTGTC
CGN-977 Cherry of Early Development Stage Coffea canephora cDNA clone cccs18w8e24 5', mRNA sequence.
DV663309.1:136-159
ACGACTCATCAGGGATCGTTCAGGTGCAGG136TTTCACCGCTCCAATTCTACTGCCTATTTCAAGAGATCAAAGTCCATGCCTGTC
CGN-3289 Pericarp Coffea canephora cDNA clone cccp12a14 5', mRNA sequence.
DV665695.1:147-170
ACGACTCATCAGGGATCGTTCAGGTGCAGG147TTTCACCGCTCCAATTCTACTGCCTATTTCAAGAGATCAAAGTCCATGCCTGTC
CGN-5548 Cherry of Early Development Stage Coffea canephora cDNA clone cccs18w9e24 5', mRNA sequence.
DV667346.1:136-159
ACGACTCATCAGGGATCGTTCAGGTGCAGG136TTTCACCGCTCCAATTCTACTGCCTATTTCAAGAGATCAAAGTCCATGCCTGTC
CGN-21753 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w28m5 5', mRNA sequence.
DV682112.1:186-209
ACGACTCATCAGGGATCGTTCAGGTGCAGG186TTTCACCGCTCCAATTCTACTGCCTATTTCAAGAGATCAAAGTCCATGCCTGTC
CGN-22064 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w30i21 5', mRNA sequence.
DV682309.1:242-265
ACGACTCATCAGGGATCGTTCAGGTGCAGG242TTTCACCGCTCCAATTCTACTGCCTATTTCAAGAGATCAAAGTCCATGCCTGTC
CGN-34054 Leaf Coffea canephora cDNA clone cccl13l10 5', mRNA sequence.
DV690605.1:248-271
ACGACTCATCAGGGATCGTTCAGGTGCAGG248TTTCACCGCTCCAATTCTACTGCCTATTTCAAGAGATCAAAGTCCATGCCTGTC
CGN-51380 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w3h9 5', mRNA sequence.
DV704557.1:277-300
ACGACTCATCAGGGATCGTTCAGGTGCAGG277TTTCACCGCTCCAATTCTACTGCCTATTTCAAGAGATCAAAGTCCATGCCTGTC
CGN-54417 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w21o4 5', mRNA sequence.
DV706868.1:251-274
ACGACTCATCAGGGATCGTTCAGGTGCAGG251TTTCACCGCTCCAATTCTACTGCCTATTTCAAGAGATCAAAGTCCATGCCTGTC
CC-F01_002_F23 Cherry of different development stage Coffea canephora cDNA clone CC-F01_002_F23, mRNA sequence.
EE195840.1:207-230
ACGACTCATCAGGGATCGTTCAGGTGCAGG207TTTCACCGCTCCAATTCTACTGCCTATTTCAAGAGATCAAAGTCCATGCCTGTC
CC-F01_003_B17 Cherry of different development stage Coffea canephora cDNA clone CC-F01_003_B17, mRNA sequence.
EE196045.1:241-264
ACGACTCATCAGGGATCGTTCAGGTGCAGG241TTTCACCGCTCCAATTCTACTGCCTATTTCAAGAGATCAAAGTCCATGCCTGTC
TransId-74058 CACAT36FL Coffea arabica cDNA clone CACAT36FL_44_I14_217.F similar to Symbol: None | serine-rich protein-related, contains some similarity to serine-rich proteins | chr3:4258013-4258512
GR982098.1:190-213
ACGACTCATCAGGGATCGTTCAGGTGCAGG190TTTCACCGCTCCAATTCTACTGCCTATTTCAAGAGATCAAAGTCCATGCCTGTC
TransId-83220 CACAT36FR28 Coffea arabica cDNA clone CACAT36FR28_Q2_06_E12_181.F similar to Symbol: None | serine-rich protein-related, contains some similarity to serine-rich proteins | chr3:4258013-4
GR984558.1:401-424
ACGACTCATCAGGGATCGTTCAGGTGCAGG401TTTCACCGCTCCAATTCTACTGCCTATTTCAAGAGATCAAAGTCCATGCCTGTC
TransId-83759 CACAT36FR28 Coffea arabica cDNA clone CACAT36FR28_Q3_01_03C01.F similar to Symbol: None | serine-rich protein-related, contains some similarity to serine-rich proteins | chr3:4258013-425
GR984832.1:231-254
ACGACTCATCAGGGATCGTTCAGGTGCAGG231TTTCACCGCTCCAATTCTACTGCCTATTTCAAGAGATCAAAGTCCATGCCTGTC
TransId-98722 CACAT45FR Coffea arabica cDNA clone CACAT45FR_18_G16_247.F similar to Symbol: None | serine-rich protein-related, contains some similarity to serine-rich proteins | chr3:4258013-4258512
GR989981.1:257-280
ACGACTCATCAGGGATCGTTCAGGTGCAGG257TTTCACCGCTCCAATTCTACTGCCTATTTCAAGAGATCAAAGTCCATGCCTGTC
TransId-110870 CarCTFrHh24FL Coffea arabica cDNA clone CarCTFrHh24FL_Q1_08_K11_171.F similar to Symbol: None | serine-rich protein-related, contains some similarity to serine-rich proteins | chr3:4258
GR991508.1:226-249
ACGACTCATCAGGGATCGTTCAGGTGCAGG226TTTCACCGCTCCAATTCTACTGCCTATTTCAAGAGATCAAAGTCCATGCCTGTC
TransId-243128 CACAT36FR26 Coffea arabica cDNA clone CACAT36FR26-CAFRC02TV, mRNA sequence.
GT010556.1:226-249
ACGACTCATCAGGGATCGTTCAGGTGCAGG226TTTCACCGCTCCAATTCTACTGCCTATTTCAAGAGATCAAAGTCCATGCCTGTC
TransId-253425 CAET1425FR28 Coffea arabica cDNA clone CAET1425FR28-CAET921TV, mRNA sequence.
GT013816.1:231-254
ACGACTCATCAGGGATCGTTCAGGTGCAGG231TTTCACCGCTCCAATTCTACTGCCTATTTCAAGAGATCAAAGTCCATGCCTGTC
TransId-262079 CAHT1343PER Coffea arabica cDNA clone CAHT1343PER_Q1_03_G09_135.F, mRNA sequence.
GT016940.1:268-291
ACGACTCATCAGGGATCGTTCAGGTGCAGG268TTTCACCGCTCCAATTCTACTGCCTATTTCAAGAGATCAAAGTCCATGCCTGTC
TransId-262648 CAHT1343PER Coffea arabica cDNA clone CAHT1343PER_Q4_01_B22_338.F, mRNA sequence.
GT017113.1:32-55
ACGACTCATCAGGGATCGTTCAGGTGCAGG32TTTCACCGCTCCAATTCTACTGCCTATTTCAAGAGATCAAAGTCCATGCCTGTC
CA00-XX-PA1-020-D06-EC.F Coffea arabica PA1 Coffea arabica cDNA clone CA00-XX-PA1-020-D06-EC, mRNA sequence.
GT684412.1:183-206
ACGACTCATCAGGGATCGTTCAGGTGCAGG183TTTCACCGCTCCAATTCTACTGCCTATTTCAAGAGATCAAAGTCCATGCCTGTC
CA00-XX-FB2-039-G03-QH.F Coffea arabica FB2 Coffea arabica cDNA clone CA00-XX-FB2-039-G03-QH, mRNA sequence.
GT703956.1:60-83
ACGACTCATCAGGGATCGTTCAGGTGCAGG60TTTCACCGCTCCAATTCTACTGCCTATTTCAAGAGATCAAAGTCCATGCCTGTC
CA00-XX-FB2-045-D10-UT.F Coffea arabica FB2 Coffea arabica cDNA clone CA00-XX-FB2-045-D10-UT, mRNA sequence.
GT703957.1:66-89
ACGACTCATCAGGGATCGTTCAGGTGCAGG66TTTCACCGCTCCAATTCTACTGCCTATTTCAAGAGATCAAAGTCCATGCCTGTC
CA00-XX-FB4-003-A12-JM.F Coffea arabica FB4 Coffea arabica cDNA clone CA00-XX-FB4-003-A12-JM, mRNA sequence.
GT713478.1:240-263
ACGACTCATCAGGGATCGTTCAGGTGCAGG240TTTCACCGCTCCAATTCTACTGCCTATTTCAAGAGATCAAAGTCCATGCCTGTC
Coffea canephora microsatellite ES1 sequence.
DQ778713.1:241-264
ACGACTCATCAGGGATCGTTCAGGTGCAGG241TTTCACCGCTCCAATTCTACTGCCTATTTCAAGAGATCAAAGTCCATGCCTGTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTTCACCGCTCCAATTCTACTGCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTCACCGCTCCAATTCTACTGCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.630 | 1.622 | search_plus_done; http://172.18.8.135:50400/match?q=TTTCACCGCTCCAATTCTACTGCC&k=0&no_gap=0&offset=0&limit=50
1.664 | 0.034 | search_minus_done; http://172.18.8.135:50400/match?q=GGCAGTAGAATTGGAGCGGTGAAA&k=0&no_gap=0&offset=0&limit=25
1.664 | 0.000 | cgi_end;

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