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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-04 08:17:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Onychomys torridus genome assembly, chromosome: 10.
LR877197.1:18860632-18860651
TCCTTTTAAAAATATTCTTTTAAAGTTTTA18860632TTTTATGTGCATGGTGGGTGTTTTGCCTACATGTATATCTGTGTACCATG
Onychomys leucogaster genome assembly, chromosome: 10.
OX460380.1:19315632-19315651
TCCTTTTAAAAATATTCTTTTTAAGTTTTA19315632TTTTATGTGCATGGTGGGTGTTTTGCCTACATGTATGTCTGTGTACCATG
Onychomys leucogaster genome assembly, chromosome: 10.
OX460427.1:19327141-19327160
TCCTTTTAAAAATATTCTTTTTAAGTTTTA19327141TTTTATGTGCATGGTGGGTGTTTTGCCTACATGTATGTCTGTGTACTTGT
Onychomys torridus genome assembly, chromosome: 10.
OX460891.1:18860632-18860651
TCCTTTTAAAAATATTCTTTTAAAGTTTTA18860632TTTTATGTGCATGGTGGGTGTTTTGCCTACATGTATATCTGTGTACCATG
Anas platyrhynchos genome assembly, chromosome: 21.
LS423631.1:1138731-1138750
TCTTTCTCATCTTTTTTTTTTTTTTTTTTT1138731TTTTATGTGCATGGTGGGTGACTGAAACAAGGTTTTTGCTCCCCATTCCT
Aegilops umbellulata cultivar TA1851 chromosome 2U.
CP136055.1:585682632-585682651
TGATTAATTTGATGACATCCCTTCCATCTT585682632TTTTATGTGCATGGTGGGTGTAGCGGCAGCAAAAACAAAGGTTGATTGAT
Blennius ocellaris genome assembly, chromosome: 1.
OY730201.1:30012755-30012774
GTTTTGTTTTGTTTTGGGTTTTTTTTCATC30012755CACCCACCATGCACATAAAATGCATTAAAAAAAAATCCAGGAGAACTAAG
uncultured Rhodoferax sp. isolate cb30231b-8da6-4265-abb7-4f80a7e9a9d0 genome assembly, chromosome: 1.
OY762068.1:3828078-3828097
ACTGGGACAGTCAAGGTGCGTGAACAGTTA3828078CACCCACCATGCACATAAAAAAACCGCCCGAAGGCGGTTTAGTGCATAAA
uncultured Rhodoferax sp. isolate 49b59fb4-daa7-4e94-af7b-87cd5f6ac65d genome assembly, chromosome: 1.
OY780937.1:3830551-3830570
ACTGGGACAGTCAAGGTGCGTGAACAGTTA3830551CACCCACCATGCACATAAAAAAACCGCCCGAAGGCGGTTTAGTGCATAAA
Arachis hypogaea cultivar Shitouqi chromosome A03.
CP030985.1:24756787-24756806
AAAAGTCCATTTCAAATAAATGTCTTACCA24756787CACCCACCATGCACATAAAAGAAGTAAAAACCACCAGAGTTTGTGATAAC
Aegilops umbellulata cultivar TA1851 chromosome 2U.
CP136055.1:592941675-592941694
ATCAATCAACCTTTCTTTTTGCTGCCGCTA592941675CACCCACCATGCACATAAAAAAGATGGAAGGGATGTCATCAAATTAATCA
Rhodoferax sp. MIZ03 DNA, complete genome.
AP024238.1:4025529-4025548
ACTGGGACAGTCAAGGTGCGTGAACAGTTA4025529CACCCACCATGCACATAAAAAAACCGCCCGAAGGCGGTTTAGTGCATAAA
Platycheirus albimanus genome assembly, chromosome: 1.
OU696696.1:351584269-351584288
CGAAAAAAAAGTCACCCAAGTGTAATTTTG351584269CACCCACCATGCACATAAAAAGGGTTATATTTCGAGCAACCACACACCAA
Podabrus alpinus genome assembly, chromosome: X.
OW026455.1:3559051-3559070
CAAACTATGTTAGGTCCCGAATACTTCGTA3559051CACCCACCATGCACATAAAAAATTACTTTTCAATGCTATTTTCTTTTTTA
Ochropleura leucogaster genome assembly, chromosome: 14.
OY288214.1:13574074-13574093
CGAATTGACATTCACCCTAACCACAACCGA13574074CACCCACCATGCACATAAAAATAAAAACGTCACAATATTGAACAATATCC
Sepia lycidas genome assembly, chromosome: 19.
OZ010589.1:57366238-57366257
CAAATGTTTTTCAGTTGCATTTTTACAGGA57366238CACCCACCATGCACATAAAAAGCTTATCTGATCTAGCCTCTTCTAATAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTTTATGTGCATGGTGGGTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTTATGTGCATGGTGGGTG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.103 | 0.094 | search_plus_done; http://172.18.8.135:50400/match?q=TTTTATGTGCATGGTGGGTG&k=0&no_gap=0&offset=0&limit=50
0.169 | 0.066 | search_minus_done; http://172.18.8.135:50400/match?q=CACCCACCATGCACATAAAA&k=0&no_gap=0&offset=0&limit=44
0.175 | 0.006 | cgi_end;

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