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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-07 08:04:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Thunnus maccoyii genome assembly, chromosome: 10.
OU343200.1:23561565-23561584
GTCAGTGCAGAGCTCTTCCAGAAATAAAGG23561565TTTTGTTCCTGCATTTTAAGTAGTGGTGCTATAAAGCCACTTACCCTAAA
Thunnus thynnus genome assembly, chromosome: 10.
OZ004741.1:23441139-23441158
GTCAGTGCAGAGCTCTTCCAGAAATAAAGG23441139TTTTGTTCCTGCATTTTAAGTAGTGGTGCTATAAAGCCACTTACCCTAAA
Saccharum hybrid cultivar R570 cultivar R570 clone BAC 102M12, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces.
KF184856.1:2412-2431
AAGAAATGCTGAATTGGGACAACCTGTAAG2412TTTTGTTCCTGCATTTTAAGTTATACATGTCCGAATATTATTTGCTGCAG
Fragaria x ananassa cultivar Benihoppe chromosome 24.
CP139752.1:18198765-18198784
AGACAACGTATAAGCTTCCTAGATACGTGA18198765TTTTGTTCCTGCATTTTAAGTTTAGAAGGAGAAAACATCACATCGAAACT
Pyrus communis genome assembly, chromosome: 17.
OY757084.1:19426740-19426759
GGTAGAACTGGCTGTAATCTGCTCTTGCAA19426740TTTTGTTCCTGCATTTTAAGATCTCTCTCTCTCTCTAACTATCTCAATCT
Spodoptera exigua genome assembly, chromosome: 5.
LR824606.2:4786490-4786509
TGTGTGTGACTGTAAAAGATGTTAATTTAT4786490TTTTGTTCCTGCATTTTAAGCATGATTTTTATAGAATGTTCTAGAATTAT
Tachina fera genome assembly, chromosome: 2.
LR999964.1:52900803-52900822
ATCGTAGCTTTTCTTTGGATTGTGTGTGCA52900803TTTTGTTCCTGCATTTTAAGGAAAACCTACGATATTTTCCATTTGTACTA
Cerceris rybyensis genome assembly, chromosome: 1.
OU342789.1:64420373-64420392
GTGAGTTTTAGTCAGAATATTTTAGGCAAT64420373TTTTGTTCCTGCATTTTAAGTAATTTTGGTCAGAGCTTTTTGGCTAATTT
Xanthogramma pedissequum genome assembly, chromosome: 1.
OU343160.1:69159811-69159830
ATGTTCATCTTCAAAGAAAACAGCTTAAAA69159811TTTTGTTCCTGCATTTTAAGATATTTTCCACACATTAAAAGAAGTGCAAA
Xanthogramma pedissequum genome assembly, chromosome: 1.
OU343160.1:102325540-102325559
ACGTTCCTATTCAAAGAAAACAGCTCAAAA102325540TTTTGTTCCTGCATTTTAAGGTATTGTCCACACATTAAAAGAAGTGCAAG
Sicus ferrugineus genome assembly, chromosome: X.
OV277351.1:39480531-39480550
TGGCTGCGTCCTTCTTGGCAGCCTCAATCC39480531TTTTGTTCCTGCATTTTAAGCAGGGGCAAGGATATTTGCGCTCTATTGGT
Drosophila phalerata genome assembly, chromosome: 2.
OX596005.2:15265008-15265027
CGATCCGTCTTGTCAGCTTCTGGGTTAGTC15265008TTTTGTTCCTGCATTTTAAGCTTCTGCTCCTCCAATTCTAGCTTGCTTTC
Tipula helvola genome assembly, chromosome: 2.
OY744482.1:277760193-277760212
ATGGTTTCAGCCAACTGTCCATTTATTCTA277760193TTTTGTTCCTGCATTTTAAGCTCAATGTGCTTCATATAACTTAACAGTTT
Tipula helvola genome assembly, chromosome: 3.
OY744483.1:54096959-54096978
AAGATTTCAACCAATTCCTCGTATATTCTA54096959TTTTGTTCCTGCATTTTAAGCTCATGGTTGTTTCTTAAGATGAAATAAAG
Caenorhabditis sp. 8 KK-2011 genome assembly, chromosome: I.
OY751546.1:5271055-5271074
TCTCGACTGTTGATAGAGTTGCGCAAAAGG5271055TTTTGTTCCTGCATTTTAAGAATTTTTATTTCAATTTTGATTTTTTTTTC
Thunnus albacares genome assembly, chromosome: 8.
OU607599.1:11783264-11783283
TTTAGGGTAAGTGGCTTTATAGCACCACTA11783264CTTAAAATGCAGGAACAAAACCTTTATTTCTGGAAGAGCTCTGCACTGAC
Pyrus pyrifolia cultivar Housui mRNA, clone: TsuENH014_02384m, 5' end sequence.
AB450700.1:82-101
AGAGAGAAGAGAGAAGAGAGAGAGAGAGAT82CTTAAAATGCAGGAACAAAATTGCAAGAGCAGATTACAGCCAGTTCTACC
Pyrus pyrifolia mRNA, clone: NFR1_03_84, 5' end sequence, expressed in fruit.
HX745954.1:97-116
AGAGAGAAGAGAGAAGAGAGAGAGAGAGAT97CTTAAAATGCAGGAACAAAATTGCAAGAGCAGATTACAGCCAGTTCTACC
TSA: Pyrus x bretschneideri Unigene32528_XinShao mRNA sequence.
JR625320.1:54-73
CGAGAGAAGAGAGAAGAGAGAGAGAGAGAT54CTTAAAATGCAGGAACAAAATTGCAAGAGCAGATTACAGCCAGTTCTACC
Gimesia algae strain Pan161 chromosome.
CP036343.1:4256327-4256346
CCGCAGATGAACATCCCGAACCACAGGAAG4256327CTTAAAATGCAGGAACAAAACGTGTCAGCGGTATGCCCCCAGGAACATCC
Macrobrachium nipponense isolate FS-2020 chromosome 11.
CP062045.1:41818179-41818198
GAAAAGGAAGAAACCGCAACGGACTTCCTA41818179CTTAAAATGCAGGAACAAAATTTCCTCTTTAGTAGGAGTATTGAGAAAAG
Blastobasis adustella genome assembly, chromosome: 13.
OU026127.1:2460353-2460372
AATCCTAGTATAAATTGCCACACAAAGTAT2460353CTTAAAATGCAGGAACAAAACGCAATTCAATTTGACATTCTATTTCTTTT
Xanthogramma pedissequum genome assembly, chromosome: 1.
OU343160.1:57650303-57650322
TTTTGCACTTCTTTTAATGTTTGGAAAGTA57650303CTTAAAATGCAGGAACAAAATTTTAAGGTGTTTTCTTTGAAGAGGAACAT
Seladonia tumulorum genome assembly, chromosome: 3.
OU565268.1:17656542-17656561
TCGCGCCAATTTTACGGTGCGAGTTCGTCC17656542CTTAAAATGCAGGAACAAAAAAGGAAAAAATCGGTTCCGATCGGAATTCG
Steromphala cineraria genome assembly, chromosome: 13.
OU744732.1:12723427-12723446
ATTTCCTGGCTTAAAGAAAAAAAGAGCCTA12723427CTTAAAATGCAGGAACAAAATCTAATAGCAGACATCAGACACAATGGCAA
Melinaea menophilus n. ssp. AW-2005 genome assembly, chromosome: 3.
OU911040.1:26015046-26015065
GATGCGATACACAAACTGCATTCTATATTC26015046CTTAAAATGCAGGAACAAAATAAAAGAATGGGTGCAATTTTTTTAATCGC
Melinaea menophilus n. ssp. AW-2005 genome assembly, chromosome: 3.
OU911040.1:26759761-26759780
GACGCGATACACAAGCTACATTCTATATTC26759761CTTAAAATGCAGGAACAAAATAAAAGAATGGGTGTTTTTTTTTAATTGCC
Tipula vernalis genome assembly, chromosome: 2.
OY282559.1:10330077-10330096
CAATTTCTTCATATTAAGCTGCACAATGAG10330077CTTAAAATGCAGGAACAAAATAGAATAAACGAGTGGTTGGCTGAAACCAT
Tipula vernalis genome assembly, chromosome: 2.
OY282559.1:300502283-300502302
TAAACTGTTAAGTTTTATGAAGGACAGAAG300502283CTTAAAATGCAGGAACAAAACAAAATAAACGAGCTGTCTGAAACCATCAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTTTGTTCCTGCATTTTAAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTTGTTCCTGCATTTTAAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.169 | 0.160 | search_plus_done; http://172.18.8.135:50400/match?q=TTTTGTTCCTGCATTTTAAG&k=0&no_gap=0&offset=0&limit=50
0.427 | 0.258 | search_minus_done; http://172.18.8.135:50400/match?q=CTTAAAATGCAGGAACAAAA&k=0&no_gap=0&offset=0&limit=35
0.436 | 0.009 | cgi_end;

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