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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-15 19:44:26, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Danio aesculapii genome assembly, chromosome: 10.
LR812508.1:44781438-44781458
CACTGGGCCACCGTGCCACCCATCTAGGAA44781438AGGAGGAGGAGTAGGAATGGAAGGGGGGATTCTTCAAAACAAAGATGGCTG
Danio kyathit genome assembly, chromosome: 3.
LR812521.1:53129240-53129260
CTGGGCCACCATACCACCCTATAAAAGGAA53129240AGGAGGAGGAGTAGGAATGGAAGGGGGGACAACTAAGCTGCGGTCACACTG
Trifolium repens mRNA, clone: WCC07a01_001, unspecified EST.
FY456414.1:507-527
CTTTGATTTTAAGGAGGATCTACAACTACA507AGGAGGAGGAGTAGGAATGGATACACTTTACAAACAACCAGATGTTTCAAT
Strongylocentrotus purpuratus clone R3-4002D21, WORKING DRAFT SEQUENCE, 25 unordered pieces.
AC168414.2:36155-36175
AGGAGAAGGAGGTGTAGGAGGAGGAGGAGG36155AGGAGGAGGAGTAGGAATGGAAGAAAGAGGAGGCGGAGGAGAAGAGAAGAA
Strongylocentrotus purpuratus clone R3-1001K18, WORKING DRAFT SEQUENCE, 20 unordered pieces.
AC181965.1:129292-129312
GGGAGGAGAAGGAGGAGTAGGAGGAGGAGG129292AGGAGGAGGAGTAGGAATGGAAGAAAGAGGAGGCGGAGGAGAAGAGAAGAA
Cordylochernes scorpioides isolate IN4F17 chromosome 08.
CP092870.1:103056239-103056259
TCCATCTTTGGAATGATAACTTGTCTGTTG103056239AGGAGGAGGAGTAGGAATGGATACATAAGAAAACACTGATTCCTCTCTCCA
Cordylochernes scorpioides isolate IN4F17 chromosome 08.
CP092870.1:103084669-103084689
TCCATCTTGGGAATCATGACTTGTCTGTTG103084669AGGAGGAGGAGTAGGAATGGATACAAAAGAAAACACAGATTCCTCTCTCCA
Erinaceus europaeus genome assembly, chromosome: 15.
OX485825.1:76991879-76991899
CCTCCTCCTCCATCTTCCACCTCTTCCCCT76991879TCCATTCCTACTCCTCCTCCTTCACCTTCCTTCTCCTCCCCTCTTCCTCCT
Danio aesculapii genome assembly, chromosome: 22.
LR812494.1:8857790-8857810
ACAGCCATCTTCGTTTTAAAGAATGCCACC8857790TCCATTCCTACTCCTCCTCCTTTCCTAGATGGGTGGCACAGTGGCCCAGTG
Danio kyathit genome assembly, chromosome: 23.
LR812541.1:13955005-13955025
CCGATATCTTCGATTTGAAGAATCCCTCCT13955005TCCATTCCTACTCCTCCTCCTTCCTAGATGGGTGACACGGTGGCCCAGTGC
Danio rerio strain Cooch Behar (CB) genome assembly, chromosome: 25.
LR812568.1:5313593-5313613
AGCCATCTTTGTTTTAAAGAATCCCCCCCT5313593TCCATTCCTACTCCTCCTCCTTTCCTAGATTGACGGCACATTGGCCCAGTG
Danio rerio strain Nadia (NA) genome assembly, chromosome: 21.
LR812589.1:1497268-1497288
CCAAATGACAGCCATTTTCGTTTTGAAGAA1497268TCCATTCCTACTCCTCCTCCTTTCATGGGTGGCACGGTGGCCCAGTGGTTA
OG_ABa0032G07.r OG_ABa Oryza meyeriana var. granulata genomic clone OG_ABa0032G07 3', genomic survey sequence.
DU151439.1:485-505
TTGTCCAGCCACCACCACTTGTTCTTTCCT485TCCATTCCTACTCCTCCTCCTCGCCTCCGTTCCCCTCCCCCTCCGATCCGC
XTL052I06.F XTL Cercospora zeae-maydis SCOH1-5 genomic 5', genomic survey sequence.
KO500215.1:470-490
TCCCTTCTCTCTCCCCACTTCTCTTACTTC470TCCATTCCTACTCCTCCTCCTTCTCCCACATAATCCCCCACTTTCTTAATC
Strongylocentrotus purpuratus clone R3-1001K18, WORKING DRAFT SEQUENCE, 20 unordered pieces.
AC181965.1:151428-151448
TTCTTCTCTTCTCCTCCGCCTCCTCTTTCT151428TCCATTCCTACTCCTCCTCCTCCTCCTCCTCCTCCTACTCCTCCTTCTCCT
Trifolium repens isolate ACLI19 chromosome 05_0cc.
CP125844.1:53629351-53629371
ATTGAAACATCTGGTTGTTTGTAAAGTGTA53629351TCCATTCCTACTCCTCCTCCTTGTAGTTGTAGATCCTCCTTAAAATCAAAG
Trifolium repens isolate ACLI19 chromosome 05_Pall.
CP125845.1:54215053-54215073
ATTGAAACATCTGGTTGTTTGTAAACTGTA54215053TCCATTCCTACTCCTCCTCCTTGTAGTTGTAGATCCTCCTTAAAATCAAAG
Macrobrachium nipponense isolate FS-2020 chromosome 19.
CP062040.1:27873924-27873944
GGAAGAACTTTCTCTCCTTCTCTCCTCCAC27873924TCCATTCCTACTCCTCCTCCTCCTCCTCCTCCTCTATCGCCAAATTTCTCT
Periphyllus acericola genome assembly, chromosome: 1.
OX454265.1:41579972-41579992
TCAAACAACGCGTTTCCTCCTCCAGCTGTT41579972TCCATTCCTACTCCTCCTCCTAGCCCGGTGGTTGAATCTTTCGATGGCGGC
Lumbricus terrestris genome assembly, chromosome: 10.
OX457045.1:21217245-21217265
ATCTGCTTCCTCCTATTCTCATCTCCTATT21217245TCCATTCCTACTCCTCCTCCTACTCCTACTTCTCCTCCTCCTCATTTTCCT
Luidia sarsii genome assembly, chromosome: 10.
OX465110.1:3039233-3039253
CCTGCTTCGCCGCCCGATCCGTTCCTCTTG3039233TCCATTCCTACTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCTCCT
Oxytorus armatus genome assembly, chromosome: 9.
OY253752.1:21106586-21106606
CTTCCTCATAAAGATACTTTCCCTAGTCCA21106586TCCATTCCTACTCCTCCTCCTCCTTCTCGACAATTCTCAAACGTCGATCTA
Bimastos eiseni genome assembly, chromosome: 7.
OY365812.1:35560386-35560406
ACCTCCTCTTTCCCTCTTTTTCCTCCTCCT35560386TCCATTCCTACTCCTCCTCCTCCATCGTCTAAGCTTCCACGTGTGCATAGT
Cataclysta lemnata genome assembly, chromosome: Z.
OZ008338.1:24659202-24659222
TTGCTAGTTGGTATAAGACTAACGCTACTG24659202TCCATTCCTACTCCTCCTCCTACTCATCACTGTTTTAACCCTTAGTTGTCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/aGGAGGAGGAGTAGGAATGGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : aGGAGGAGGAGTAGGAATGGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.213 | 0.204 | search_plus_done; http://172.18.8.135:50400/match?q=AGGAGGAGGAGTAGGAATGGA&k=0&no_gap=0&offset=0&limit=50
0.340 | 0.126 | search_minus_done; http://172.18.8.135:50400/match?q=TCCATTCCTACTCCTCCTCCT&k=0&no_gap=0&offset=0&limit=43
0.351 | 0.011 | cgi_end;

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