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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-04 03:36:28, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Mus musculus chromosome 7, clone RP23-137A24, complete sequence.
AC136740.10:139655-139674
GCTAGGGTGACATAATGAAATCCTGTCTCA139655AGAGAAGAAAAGGAAGCCCGGCAGTGGTGGCGCACGCCTTTAATCCCAGC
Mus musculus genome assembly, chromosome: 7.
OW971565.1:67840612-67840631
GCTAGGGTGACATAATGAAATCCTGTCTCA67840612AGAGAAGAAAAGGAAGCCCGGCAGTGGTGGCGCACGCCTTTAATCCCAGC
Mus musculus genome assembly, chromosome: 7.
OW971580.1:68594544-68594563
GCTAGGGTGACATAATGAAATCCTGTCTCA68594544AGAGAAGAAAAGGAAGCCCGGCAGTGGTGGCGCACGCCTTTAATCCCAGC
Mus musculus genome assembly, chromosome: 7.
OW971601.1:64785640-64785659
GCTAGGGTGACATAATGAAATCCTGTCTCA64785640AGAGAAGAAAAGGAAGCCCGGCAGTGGTGGCACACGCCTTTAATCCCAGC
Mus musculus domesticus genome assembly, chromosome: 7.
OW971628.1:69082524-69082543
GCTAGGGTGACATAATGAAATCCTGTCTCA69082524AGAGAAGAAAAGGAAGCCCGGCAGTGGTGGCGCACGCCTTTAATCCCAGC
Mus musculus genome assembly, chromosome: 7.
OW971643.1:67968738-67968757
GCTAGGGTGACATAATGAAATCCTGTCTCA67968738AGAGAAGAAAAGGAAGCCCGGCAGTGGTGGCACACGCCTTTAATCCCAGC
Mus musculus molossinus genome assembly, chromosome: 7.
OW971664.1:77576834-77576853
GCTAGGGTGACATAATGAAATCCTGTCTCA77576834AGAGAAGAAAAGGAAGCCCGGCAGCGGTGGCGCACGCCTTTAATCCCAGC
Mus spretus genome assembly, chromosome: 7.
OW971685.1:67575539-67575558
GCTAGGGTGACATAATGAAATCCTGTCTCA67575539AGAGAAGAAAAGGAAGCCCGGCAGTGGTGGCACACGCCTTTAATCCCAGC
Mus musculus genome assembly, chromosome: 7.
OW971715.1:68476810-68476829
GCTAGGGTGACATAATGAAATCCTGTCTCA68476810AGAGAAGAAAAGGAAGCCCGGCAGTGGTGGCACACGCCTTTAATCCCAGC
Mus musculus genome assembly, chromosome: 7.
OW971727.1:66831224-66831243
GCTAGGGTGACATAATGAAATCCTGTCTCA66831224AGAGAAGAAAAGGAAGCCCGGCAGTGGTGGCGCACGCCTTTAATCCCAGC
Mus musculus genome assembly, chromosome: 7.
OW971748.1:71243628-71243647
GCTAGGGTGACATAATGAAATCCTGTCTCA71243628AGAGAAGAAAAGGAAGCCCGGCAGTGGTGGCACACGCCTTTAATCCCAGC
Mus musculus musculus genome assembly, chromosome: 7.
OW971769.1:67168470-67168489
GCTAGGGTGACATAATGAAATCCTGTCTCA67168470AGAGAAGAAAAGGAAGCCCGGCAGCGGTGGCGCACGCCTTTAATCCCAGC
Mus musculus genome assembly, chromosome: 7.
OW971790.1:68734541-68734560
GCTAGGGTGACATAATGAAATCCTGTCTCA68734541AGAGAAGAAAAGGAAGCCCGGCAGTGGTGGCGCACGCCTTTAATCCCAGC
Mus musculus genome assembly, chromosome: 7.
OW971811.1:72917344-72917363
GCTAGGGTGACATAATGAAATCCTGTCTCA72917344AGAGAAGAAAAGGAAGCCCGGCAGTGGTGGCGCACGCCTTTAATCCCAGC
Mus musculus castaneus genome assembly, chromosome: 7.
OW971841.1:71289663-71289682
GCTAGGGTGACATAATGAAATCCTGTCTCA71289663AGAGAAGAAAAGGAAGCCCGGCAGTGGTGGCGCACGCCTTTAATCCCAGC
Mus musculus genome assembly, chromosome: 7.
OW971859.1:68743312-68743331
GCTAGGGTGACATAATGAAATCCTGTCTCA68743312AGAGAAGAAAAGGAAGCCCGGCAGTGGTGGCGCACGCCTTTAATCCCAGC
Mus musculus genome assembly, chromosome: 7.
OX389801.1:77245695-77245714
GCTAGGGTGACATAATGAAATCCTGTCTCA77245695AGAGAAGAAAAGGAAGCCCGGCAGTGGTGGCACACGCCTTTAATCCCAGC
Mus musculus genome assembly, chromosome: 7.
OX390151.1:79006824-79006843
GCTAGGGTGACATAATGAAATCCTGTCTCA79006824AGAGAAGAAAAGGAAGCCCGGCAGTGGTGGCGCACGCCTTTAATCCCAGC
Mus musculus genome assembly, chromosome: 7.
OX439021.1:81241112-81241131
GCTAGGGTGACATAATGAAATCCTGTCTCA81241112AGAGAAGAAAAGGAAGCCCGGCAGTGGTGGCGCACGCCTTTAATCCCAGC
Triticum aestivum genome assembly, chromosome: 2A.
LR862511.1:321143276-321143295
AGAGGAAAATTCTCCCCCTCCAGCCGGGGG321143276AGAGAAGAAAAGGAAGCCCGCCACATCCGGGGAGGCCGAAGGGTCCAAGA
Triticum aestivum genome assembly, chromosome: 5B.
LR862521.1:265548030-265548049
GGAAAGAGAAGTTTCTCCCCCAGCGGGGGG265548030AGAGAAGAAAAGGAAGCCCGCCCCAACGAGGGAGGCCGGAGGGTCCAAGA
Triticum aestivum genome assembly, chromosome: 5B.
LR862542.1:264894513-264894532
GGAAAGAGAAGTTTCTCCCCCAGCGGGGGG264894513AGAGAAGAAAAGGAAGCCCGCCCCAACGAGGGAGGCCGGAGGGTCCAAGA
Triticum aestivum genome assembly, chromosome: 7B.
LR862569.1:539299237-539299256
GGAAAGAGAAGTTTCTCCCCCAGCGGGGGG539299237AGAGAAGAAAAGGAAGCCCGCCCCAACGAGGGAGGCCGGAGGGTCCAAGA
Triticum aestivum genome assembly, chromosome: 5B.
LR865471.1:265148050-265148069
GGAAAGAGAAGTTTCTCCCCCAGCGGGGGG265148050AGAGAAGAAAAGGAAGCCCGCCCCAACGAGGGAGGCCGGAGGGTCCAAGA
Triticum aestivum genome assembly, chromosome: 2A.
LR865482.1:311190747-311190766
AGAGGAAAATTCTCCCCCTCCAGCCGGGGG311190747AGAGAAGAAAAGGAAGCCCGCCACATCCGGGGAGGCCGAAGGGTCCAAGA
Triticum aestivum genome assembly, chromosome: 5B.
LR865492.1:267294991-267295010
GGAAAGAGAAGTTTCTCCCCCAGCGGGGGG267294991AGAGAAGAAAAGGAAGCCCGCCCCAACGAGGGAGGCCGGAGGGTCCAAGA
Triticum aestivum genome assembly, chromosome: 5B.
LR865513.1:282217535-282217554
GGAAAGAGAAGTTTCTCCCCCAGCGGGGGG282217535AGAGAAGAAAAGGAAGCCCGCCCCAACGAGGGAGGCCGGAGGGTCCAAGA
Triticum aestivum genome assembly, chromosome: 5B.
LR865752.1:275890277-275890296
GGAAAGAGAAGTTTCTCCCCCAGCGGGGGG275890277AGAGAAGAAAAGGAAGCCCGCCCCAACGAGGGAGGCCGGAGGGTCCAAGA
Triticum aestivum genome assembly, chromosome: 1A.
LR865760.1:161362-161381
AGAAGAGACCTCTCCCCCTCCAGCGGGAGG161362AGAGAAGAAAAGGAAGCCCGCCCTCTCTGGGGAGGCCGGAGGATCCAAGA
Triticum aestivum genome assembly, chromosome: 5B.
LR877322.1:269329618-269329637
GGAAAGAGAAGTTTCTCCCCCAGCGGGGGG269329618AGAGAAGAAAAGGAAGCCCGCCCCAACGAGGGAGGCCGGAGGGTCCAAGA
Triticum aestivum genome assembly, chromosome: 5B.
LR878448.1:274787052-274787071
GGAAAGAGAAGTTTCTCCCCCAGCGGGGGG274787052AGAGAAGAAAAGGAAGCCCGCCCCAACGAGGGAGGCCGGAGGGTCCAAGA
Aegilops sharonensis genome assembly, chromosome: 3S.
LR880968.1:750341049-750341068
GGAAAAAGAAGCCTCTCCCCCAGCGGGGAG750341049AGAGAAGAAAAGGAAGCCCGCCCCAACTGGGGAGGCCAGAGGGTCGAAGA
Aegilops sharonensis genome assembly, chromosome: 7S.
LR880972.1:778605730-778605749
GGAAAAAGAAGCCTCTCCCCCAGCAGGGGG778605730AGAGAAGAAAAGGAAGCCCGCCCCGACTGGGGAGGCCGGAGGGTTCAAGA
Aegilops longissima genome assembly, chromosome: 5S.
LR881073.1:25000535-25000554
GGAAAAAGAGGTCTCTCCCCCAGCGGGGGG25000535AGAGAAGAAAAGGAAGCCCGCCCCAACTGGGGAGGCCGAAGGGTCCAAGA
Aegilops longissima genome assembly, chromosome: 5S.
LR881073.1:57565633-57565652
GGTAAAAGAAGCCTCTCCCCTAGCGGGGGG57565633AGAGAAGAAAAGGAAGCCCGCCCCGACTGGGGAGGCCGGATGGTCCAAGA
Triticum aestivum genome assembly, chromosome: 5B.
LS992093.1:265275612-265275631
GGAAAGAGAAGTTTCTCCCCCAGCGGGGGG265275612AGAGAAGAAAAGGAAGCCCGCCCCAACGAGGGAGGCCGGAGGGTCCAAGA
Triticum turgidum subsp. durum genome assembly, chromosome: 5B.
LT934120.1:264451009-264451028
GGAAAGAGAAGTTTCTCCCCCAGCGGGGGG264451009AGAGAAGAAAAGGAAGCCCGCCCCAACGAGGGAGGCCGGAGGGTCCAAGA
Triticum aestivum genome assembly, chromosome: 5B.
OU015734.1:283610807-283610826
GGAAAGAGAAGTTTCTCCCCCAGCGGGGGG283610807AGAGAAGAAAAGGAAGCCCGCCCCAACGAGGGAGGCCGGAGGGTCCAAGA
Triticum aestivum genome assembly, chromosome: 5B.
OU343180.1:284168325-284168344
GGAAAGAGAAGTTTCTCCCCCAGCGGGGGG284168325AGAGAAGAAAAGGAAGCCCGCCCCAACGAGGGAGGCCGGAGGGTCCAAGA
Triticum aestivum genome assembly, chromosome: 5B.
OU963885.1:264924560-264924579
GGAAAGAGAAGTTTCTCCCCCAGCGGGGGG264924560AGAGAAGAAAAGGAAGCCCGCCCCAACGAGGGAGGCCGGAGGGTCCAAGA
Triticum aestivum genome assembly, chromosome: 5B.
OV100750.1:274785777-274785796
GGAAAGAGAAGTTTCTCCCCCAGCGGGGGG274785777AGAGAAGAAAAGGAAGCCCGCCCCAACGAGGGAGGCCGGAGGGTCCAAGA
Triticum aestivum genome assembly, chromosome: 5B.
OW530323.1:274785777-274785796
GGAAAGAGAAGTTTCTCCCCCAGCGGGGGG274785777AGAGAAGAAAAGGAAGCCCGCCCCAACGAGGGAGGCCGGAGGGTCCAAGA
Triticum aestivum genome assembly, chromosome: 5B.
OX637238.1:227353660-227353679
GGAAAGAGAAGTTTCTCCCCCAGCGGGGGG227353660AGAGAAGAAAAGGAAGCCCGCCCCAACGAGGGAGGCCGGAGGGTCCAAGA
Triticum monococcum genome assembly, chromosome: 6A.
OY737855.1:339055634-339055653
AAGAAGAGACCTCTCCCCCTGCAGCGGGGG339055634AGAGAAGAAAAGGAAGCCCGCTCTCTCGAGGGAGGCCGGAGGGTCCAAGA
Triticum monococcum genome assembly, chromosome: 6A.
OY737855.1:402976150-402976169
AGAAGAGACCTCTCCCCCTCCAGCGGGAGG402976150AGAGAAGAAAAGGAAGCCCGCCCTCTCTGAGGAGGCCGGAGGGTCCAAGA
Triticum monococcum genome assembly, chromosome: 1A.
OY737858.1:415282-415301
AGAAGAGACCTCTCCCCCTCCAGTGGGAGG415282AGAGAAGAAAAGGAAGCCCGCCCTCTCTGGGGAGGCCAGAGGGTCCAAGA
Triticum monococcum genome assembly, chromosome: 6A.
OY737863.1:398959864-398959883
AGAAGAGACCTCTCCCCCTCCAGCGGGAGG398959864AGAGAAGAAAAGGAAGCCCGCCCTCTCTAAGGAGGCCGGAGGGTCCAAGA
Triticum timopheevii genome assembly, chromosome: 4At.
OY997267.1:88952039-88952058
AAGAAGAGACCTCTCCCCCTCCAGCGGAGG88952039AGAGAAGAAAAGGAAGCCCGCCCTCACTAGGGAGGCCGAAGGGTCCAAGA
Triticum timopheevii genome assembly, chromosome: 5At.
OY997269.1:640559096-640559115
GGAAGAGACCTCTCCCCCTCCAGCGGGGGG640559096AGAGAAGAAAAGGAAGCCCGCCCTCACTGGGGAGGCCGAAGGGTCCAAGA
Triticum timopheevii genome assembly, chromosome: 5G.
OY997270.1:258160113-258160132
GGAAAGAGAAGTTTCTCCCCCAGCAGAGGG258160113AGAGAAGAAAAGGAAGCCCGCCCCAACGGGGGAGGCCGGAGGGTCCAAGA
Isoperla grammatica genome assembly, chromosome: 5.
OX246741.1:26690906-26690925
CAGATCTGGCTTGATTCTATCGGCATGAAG26690906AGAGAAGAAAAGGAAGCCCGACTACTGCAGTAGTCAGGCTTCCTTTTCTT
Taphrorychus bicolor genome assembly, chromosome: 2.
OX638298.1:10617313-10617332
GTGCTTCAACCACCAGATACCACTAGATAA10617313AGAGAAGAAAAGGAAGCCCGATGAGGCATAAAAGAAAAGAAGGAAGTATG
Taphrorychus bicolor genome assembly, chromosome: 2.
OX638298.1:24329203-24329222
GTGCTTCAACCACCAGATACCACTAGATAA24329203AGAGAAGAAAAGGAAGCCCGATGAGGCATAAAAGAAAATAAGGAAGTATG
Taphrorychus bicolor genome assembly, chromosome: 2.
OX638298.1:34464345-34464364
GTGCTTCAACCACCAGGTACCACTAGATAA34464345AGAGAAGAAAAGGAAGCCCGATGAGGCATAAAAGAAAAGAAGGAAGTATG
Taphrorychus bicolor genome assembly, chromosome: 5.
OX638301.1:40409217-40409236
ATGCTTCAACCACCAGATACCACTAAATAA40409217AGAGAAGAAAAGGAAGCCCGATGAGGCATAAAAGAAAAGAAGGAAGTATG
Taphrorychus bicolor genome assembly, chromosome: 7.
OX638303.1:4425948-4425967
GTGCTTCAACCACCAGATTCCACTAGATAA4425948AGAGAAGAAAAGGAAGCCCGATGAGGCATAAAAGAAAAGAAGGGAGTATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/agagaagaaaaggaagcccG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : agagaagaaaaggaagcccG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.103 | 0.094 | search_plus_done; http://172.18.8.135:50400/match?q=AGAGAAGAAAAGGAAGCCCG&k=0&no_gap=0&offset=0&limit=50
0.158 | 0.055 | search_minus_done; http://172.18.8.135:50400/match?q=CGGGCTTCCTTTTCTTCTCT&k=0&no_gap=0&offset=0&limit=0
0.158 | 0.000 | cgi_end;

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