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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-04 04:49:45, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Acomys kempi genome assembly, chromosome: 13.
OU015367.1:39484651-39484669
GCTGGTGGCCACTAAGCCCCAGTGGTCTTC39484651ATGGCTTTGCTAACAACAGTGCTGGGGTTATGAACATTCAGCCATACTT
Acomys percivali genome assembly, chromosome: 13.
OU015754.1:39713375-39713393
GCTGGTGGCCACTAAGCCCCAGTGGTCTTC39713375ATGGCTTTGCTAACAACAGTGCTGGGATTATGAACATTCAGCCATACCT
Mus musculus genome assembly, chromosome: 5.
OW971569.1:48252562-48252580
TGTGCACTGAAACCCAATCTGCATGCTTGC48252562ATGGCTTTGCTAACAACAGCTGACTGGTCACTAAACAAGATGGAGGCAG
Mus musculus genome assembly, chromosome: 5.
OW971578.1:48441314-48441332
TGTGCACTGAAACCCAATCTGCATGCTTGC48441314ATGGCTTTGCTAACAACAGCTGACTGGTCACTAAACAAGATGGAGGCAG
Mus musculus genome assembly, chromosome: 5.
OW971598.1:47760727-47760745
TGTGCACTGAAACCCAATCTGCATGCTTGC47760727ATGGCTTTGCTAACAACAGCTGACTGGTCACTAAACAAGATGGAGGCAG
Mus musculus domesticus genome assembly, chromosome: 5.
OW971634.1:50359775-50359793
TGTGCACTGAAACCCAATCTGCATGCTTGC50359775ATGGCTTTGCTAACAACAGCTGACTGGTCACTAAACAAGATGGAGGCAG
Mus musculus genome assembly, chromosome: 5.
OW971642.1:47460279-47460297
TGTGCACTGAAACCCAATCTGCATGCTTGC47460279ATGGCTTTGCTAACAACAGCTGACTGGTCACTAAACAAGATGGAGGCAG
Mus musculus molossinus genome assembly, chromosome: 5.
OW971662.1:54897223-54897241
TGTGCACTGAAACCCAATCTGCATGCTTGC54897223ATGGCTTTGCTAACAACAGCTGACTGGTCACTAAACAAGATGGAGGCAG
Mus spretus genome assembly, chromosome: 5.
OW971684.1:49044568-49044586
TTTGCACTGAAACCCAATCTGCATGTTTGC49044568ATGGCTTTGCTAACAACAGCTGACTGGTCACTAAACAAGATGGAGGCAG
Mus musculus genome assembly, chromosome: 5.
OW971713.1:47270616-47270634
TGTGCACTGAAACCCAATCTGCATGCTTGC47270616ATGGCTTTGCTAACAACAGCTGACTGGTCACTAAACAAGATGGAGGCAG
Mus musculus genome assembly, chromosome: 5.
OW971726.1:48330745-48330763
TGTGCACTGAAACCCAATCTGCATGCTTGC48330745ATGGCTTTGCTAACAACAGCTGACTGGTCACTAAACAAGATGGAGGCAG
Mus musculus genome assembly, chromosome: 5.
OW971746.1:47691057-47691075
TGTGCACTGAAACCCAATCTGCATGCTTGC47691057ATGGCTTTGCTAACAACAGCTGACTGGTCACTAAACAAGATGGAGGCAG
Mus musculus musculus genome assembly, chromosome: 5.
OW971768.1:47561621-47561639
TGTGCACTGAAACCCAATCTGCATGATTGC47561621ATGGCTTTGCTAACAACAGCTGACTGGTCACTAAACAAGATGGAGGCAG
Mus musculus genome assembly, chromosome: 5.
OW971788.1:47386821-47386839
TGTGCACTGAAACCCAATCTGCATGCTTGC47386821ATGGCTTTGCTAACAACAGCTGACTGGTCACTAAACAAGATGGAGGCAG
Mus musculus genome assembly, chromosome: 5.
OW971809.1:50319780-50319798
TGTGCACTGAAACCCAATCTGCATGCTTGC50319780ATGGCTTTGCTAACAACAGCTGACTGGTCACTAAACAAGATGGAGGCAG
Mus musculus castaneus genome assembly, chromosome: 5.
OW971839.1:47612249-47612267
TGTGCACTGAAACCCAATCTGCATGCTTGC47612249ATGGCTTTGCTAACAACAGCTGACTGGTCACTAAACAAGATGGAGGCAG
Mus musculus genome assembly, chromosome: 5.
OW971857.1:49480926-49480944
TGTGCACTGAAACCCAATCTGCATGCTTGC49480926ATGGCTTTGCTAACAACAGCTGACTGGTCACTAAACAAGATGGAGGCAG
Mus musculus genome assembly, chromosome: 5.
OX389799.1:60099468-60099486
TGTGCACTGAAACCCAATCTGCATGCTTGC60099468ATGGCTTTGCTAACAACAGCTGACTGGTCACTAAACAAGATGGAGGCAG
Mus musculus genome assembly, chromosome: 5.
OX390149.1:54994382-54994400
TGTGCACTGAAACCCAATCTGCATGCTTGC54994382ATGGCTTTGCTAACAACAGCTGACTGGTCACTAAACAAGATGGAGGCAG
Mus musculus genome assembly, chromosome: 5.
OX439019.1:54287764-54287782
TGTGCACTGAAACCCAATCTGCATGCTTGC54287764ATGGCTTTGCTAACAACAGCTGACTGGTCACTAAACAAGATGGAGGCAG
Micromys minutus genome assembly, chromosome: 1.
OZ004780.1:9024602-9024620
AGGACAATATCATGGTGAGAGTTTTATAAA9024602ATGGCTTTGCTAACAACAGTACGAATGATTAGGGGACGAAGAAGAGGGA
Sparus aurata genome assembly, chromosome: 3.
LR537123.1:16245996-16246014
TGTATTACTCGAAAGTTGGCTAGCGTTAGC16245996ATGGCTTTGCTAACAACAGCTCATGGTCGACCTACTCTAACCTTAGCTA
Acanthopagrus latus isolate v.2019 genome assembly, chromosome: 3.
LR884462.1:13352523-13352541
TGTATTACTCGAAAGTTGGCTAGCGTTAGC13352523ATGGCTTTGCTAACAACAGCTCATGGTTGACCTACTCTAACATTAGCTG
Haliaeetus albicilla genome assembly, chromosome: 10.
OX381647.1:4910936-4910954
GTTTGAACAAAGGAAATCTTGTTGGAAGCT4910936ATGGCTTTGCTAACAACAGAAGAACTGCCTTTAAGCATTAATGATAAGC
Hyperoplus immaculatus genome assembly, chromosome: 5.
OX442353.1:1981034-1981052
TGTGCCTGGCTGAAAATAATTACATTTTAA1981034ATGGCTTTGCTAACAACAGCCAGCACATTAGCGTGTTAATTCAGGCCAA
Ammodytes marinus genome assembly, chromosome: 13.
OX465157.1:2328311-2328329
TGTGCCTGGCTGAAAATAATTACATTTTAA2328311ATGGCTTTGCTAACAACAGCCAGCACATTAGCGTGTTAATTCAGGCCAA
Phalacrocorax carbo genome assembly, chromosome: 19.
OY997621.1:6277885-6277903
GGAGCAGATATCTCTCTCTTGGTACTTACC6277885ATGGCTTTGCTAACAACAGCGTCATGTCCTTACGTACAGCCTCAGAAAA
BOGAO26TF BOGA Brassica oleracea genomic clone BOGAO26, genomic survey sequence.
BH249838.1:376-394
ATTTTTAATGTATTTTTTTTTTCATATAAC376ATGGCTTTGCTAACAACAGAATCCAGCATAAAACATCAACTGCATTTTA
BoTo91K18/F BOTO1 Brassica oleracea genomic, genomic survey sequence.
FI569234.1:413-431
ATTTTTAATGTATTTTTTTTTTCATATAAC413ATGGCTTTGCTAACAACAGAATCCAGCATAAAACATCAACTGCATTTTA
Rattus norvegicus clone CH230-81E22, WORKING DRAFT SEQUENCE, 7 unordered pieces.
AC107189.5:46764-46782
AAGAGAATACCATGATCAGAGTTTTACAAA46764ATGGCTTTGCTAACAACAGTAAGAATGATTAGGAAGCAAAGAATGATTT
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB002B23, complete sequence.
AC232437.1:74019-74037
TTTCTTAATGTATTTTTTTTTTCATATAAC74019ATGGCTTTGCTAACAACAGAATCCAGCATAAAACATCAACTGCATTTTA
Brassica napus cultivar Xiang5A chromosome 15.
CP123890.1:967476-967494
TTTTTTAATGTATTTTTTTTTTCATATAAC967476ATGGCTTTGCTAACAACAGAATCCAGCATAAAACATCAACTGCATTTTA
Bacillus cereus biovar anthracis str. CI, complete genome.
CP001746.1:2396410-2396428
TTGTGAAAGATAAAGACACTGGAAAAGCTA2396410ATGGCTTTGCTAACAACAGTAATTCTGATAAAAATGAATCTACATATAA
Bacillus cereus strain ISSFR-9F chromosome, complete genome.
CP018933.1:2361651-2361669
TTGTGAAAGATAAAGACACTGGAAAAGCTA2361651ATGGCTTTGCTAACAACAGTAATTCTGATAAAAATGAATCTACATATAA
Bacillus sp. HBCD-sjtu chromosome, complete genome.
CP025122.1:5074805-5074823
TTGTGAAAGATAAAGACACTGGAAAAGCTA5074805ATGGCTTTGCTAACAACAGTAATTCTGATAAAAATGAATCTACATATAA
Bacillus anthracis strain MCCC 1A02161 chromosome, complete genome.
CP031642.1:2441000-2441018
TTGTGAAAGATAAAGACACTGGAAAAGCTA2441000ATGGCTTTGCTAACAACAGTAATTCTGATAAAAATGAATCTACATATAA
Bacillus cereus strain BC06 chromosome, complete genome.
CP072766.1:2417058-2417076
TTGTGAAAGATAAAGACACTGGAAAAGCTA2417058ATGGCTTTGCTAACAACAGTAATTCTGATAAAAATGAATCTACATATAA
Mytilus edulis genome assembly, chromosome: 10.
OY782965.1:80938436-80938454
ATGAAACAACTACATAGACATACTATTAGT80938436ATGGCTTTGCTAACAACAGTAGAAAAACAAGAACAACCAATTCTAAATA
Mus musculus chromosome 5, clone RP23-181F22, complete sequence.
AC120128.17:72347-72365
CTGCCTCCATCTTGTTTAGTGACCAGTCAG72347CTGTTGTTAGCAAAGCCATGCAAGCATGCAGATTGGGTTTCAGTGCACA
Rhinatrema bivittatum genome assembly, chromosome: 7.
LR584393.1:157874554-157874572
TACATATCATGAAACTTATCTTGCTTGATA157874554CTGTTGTTAGCAAAGCCATTCATTTCCTCGCTCAGACTCATGCCCGCCT
Danio aesculapii genome assembly, chromosome: 4.
LR812500.1:43466319-43466337
ACCTAGTTTTTAAAGGTAATTTAGGCTGCA43466319CTGTTGTTAGCAAAGCCATAAACCTTTTAAAATGTCATCAAATGATTCT
Mobula hypostoma genome assembly, chromosome: 18.
OY992610.1:55182157-55182175
GTGAATAAGTTTCATCATCTTCAAAATAAG55182157CTGTTGTTAGCAAAGCCATAATGCATTGCTTAACTCCAGAGTCTTAAAT
2M0073N03R Mouse 10kb plasmid UUGC1M library Mus musculus genomic clone UUGC2M0073N03 R, genomic survey sequence.
AZ809529.1:260-278
CTGCCTCCATCTTGTTTAGTGACCAGTCAG260CTGTTGTTAGCAAAGCCATGCAAGCATGCAGATTGGGTTTCAGTGCACA
2M0073P01R Mouse 10kb plasmid UUGC1M library Mus musculus genomic clone UUGC2M0073P01 R, genomic survey sequence.
AZ809539.1:259-277
CTGCCTCCATCTTGTTTAGTGACCAGTCAG259CTGTTGTTAGCAAAGCCATGCAAGCATGCAGATTGGGTTTCAGTGCACA
BOT01-112O12TF BOT01 Brassica oleracea genomic clone BOT01-112O12, genomic survey sequence.
FI761284.1:301-319
TAAAATGCAGTTGATGTTTTATGCTGGATT301CTGTTGTTAGCAAAGCCATGTTATATGAAAAAAAAAATACATTAAAAAT
Rattus norvegicus clone CH230-418L11, WORKING DRAFT SEQUENCE, 4 unordered pieces.
AC120059.4:99195-99213
AAATCATTCTTTGCTTCCTAATCATTCTTA99195CTGTTGTTAGCAAAGCCATTTTGTAAAACTCTGATCATGGTATTCTCTT
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB017P15, complete sequence.
AC189246.2:114751-114769
TAAAATGCAGTTGATGTTTTATGCTGGATT114751CTGTTGTTAGCAAAGCCATGTTATATGAAAAAAAAAATACATTAAGAAA
Brassica napus cultivar Xiang5A chromosome 4.
CP123879.1:68736022-68736040
TAAAATGCAGTTGATGTTTTATGCTGGATT68736022CTGTTGTTAGCAAAGCCATGTTATATGAAAAAAAAAAGAAGTTGGCTTT
Brassica napus genome assembly, chromosome: A09.
HG994363.1:52689834-52689852
TAAAATGCAGTTGATGTTTTATGCTGGATT52689834CTGTTGTTAGCAAAGCCATGTTATATGAAAAAAAAAAGAAGTTGGCTTT
Brassica napus genome assembly, chromosome: C08.
HG994372.1:40714015-40714033
TAAAATGCAGTTGATGTTTTATGCTGGATT40714015CTGTTGTTAGCAAAGCCATGTTATATGAAAAAAAAAATACATTAAAAAA
Brassica rapa genome, scaffold: A09.
LR031568.1:56756687-56756705
TAAAATGCAGTTGATGTTTTATGCTGGATT56756687CTGTTGTTAGCAAAGCCATGTTATATGAAAAAAGAAATACATTAAAAAA
Brassica oleracea HDEM genome, scaffold: C8.
LR031879.1:49991962-49991980
TAAAATGCAGTTGATGTTTTATGCTGGATT49991962CTGTTGTTAGCAAAGCCATGTTATATGAAAAAAAAAATACATTAAAAAT
Brassica rapa genome assembly, chromosome: A09.
LS974625.2:67280754-67280772
TAAAATGCAGTTGATGTTTTATGCTGGATT67280754CTGTTGTTAGCAAAGCCATGTTATATGAAAAAAGAAATACATTAAAAAA
Bacillus cereus strain ISSFR-3F chromosome, complete genome.
CP018931.1:2897141-2897159
TTATATGTAGATTCATTTTTATCAGAATTA2897141CTGTTGTTAGCAAAGCCATTAGCTTTTCCAGTGTCTTTATCTTTCACAA
Bacillus cereus strain JEM-2 chromosome, complete genome.
CP018935.1:4512117-4512135
TTATATGTAGATTCATTTTTATCAGAATTA4512117CTGTTGTTAGCAAAGCCATTAGCTTTTCCAGTGTCTTTATCTTTCACAA
Agrypnus murinus genome assembly, chromosome: 8.
OV816031.1:91040694-91040712
CTGTGTTGGAAACGTTGATTCATAGCGAAT91040694CTGTTGTTAGCAAAGCCATCTTGATCAACAGCATAGTTGCAAAGTTATA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/atggctttgctaacaacag
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : atggctttgctaacaacag | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.191 | 0.183 | search_plus_done; http://172.18.8.135:50400/match?q=ATGGCTTTGCTAACAACAG&k=0&no_gap=0&offset=0&limit=50
0.340 | 0.149 | search_minus_done; http://172.18.8.135:50400/match?q=CTGTTGTTAGCAAAGCCAT&k=0&no_gap=0&offset=0&limit=12
0.351 | 0.011 | cgi_end;

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