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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-06 07:10:12, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Muscardinus avellanarius genome assembly, chromosome: 22.
OY726579.1:15867620-15867637
ATCCTGAAGGTCCCTCGTCCCATCTCCAGC15867620CCACCCGTGTCTCAATCCCATCCCAGTGTCCACACAACATCTCTATCT
Muscardinus avellanarius genome assembly, chromosome: 22.
OY726579.1:16842818-16842835
ATCCTGAAGGTCCCTCGTCCCATCTCCAGC16842818CCACCCGTGTCTCAATCCCATCCCAGTGTCCACACAACATCTCTATCT
Porphyra yezoensis cDNA, clone:PFL089d03_r, 5'end.
AU196413.1:298-315
CCGGGCATGGCGGGCCATCCCCGTGCACCG298CCACCCGTGTCTCAATCCCGGCCGTCGGTGGCAGCGCGTCGGTTGCCG
Platycnemis pennipes genome assembly, chromosome: 2.
OW121848.1:101468635-101468652
CAAACTCTCGCTCCTACCGAGCTTCCCCAT101468635CCACCCGTGTCTCAATCCATTATGCAAGGAAGCATTCCTAAGCTACTA
Alsophila aescularia genome assembly, chromosome: Z.
OX276373.1:20100086-20100103
GAGAAATTAAATGTCTCACCTGTCTCTAAG20100086CCACCCGTGTCTCAATCCCAACACGGTAACTTCAGCTCTCTCCATTAT
Phalacrocorax aristotelis genome assembly, chromosome: W.
OX451232.1:26791317-26791334
TGACATTTTAGTCAGTTGGAAAGACTGATG26791317GGATTGAGACACGGGTGGTGTAGGGGTGTCTCTGCGGGAGTTGGCTTT
Zelleria hepariella genome assembly, chromosome: 6.
OX439384.1:3804609-3804626
CTTCCAGGCACTGATGTAAAAAATGCTAAG3804609GGATTGAGACACGGGTGGTTGGTGCTGAAGAGATTTGAATTTGTTAGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/cCACCCGTGTCTCAATCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : cCACCCGTGTCTCAATCC | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.107 | 0.098 | search_plus_done; http://172.18.8.135:50400/match?q=CCACCCGTGTCTCAATCC&k=0&no_gap=0&offset=0&limit=50
0.134 | 0.028 | search_minus_done; http://172.18.8.135:50400/match?q=GGATTGAGACACGGGTGG&k=0&no_gap=0&offset=0&limit=45
0.136 | 0.001 | cgi_end;

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