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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-16 19:52:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Pyrus x bretschneideri Unigene60396_XinShao mRNA sequence.
JR648592.1:19-40
CTCTCTCTCTCTCTCTCT19CAAGTTTTCAACCAAACATGTCTGATTCAAATTCTACACCTGCTTCTTCTTC
Papaver somniferum cultivar Roxanne chromosome 2.
CP048214.1:268834514-268834535
CCAACTAGGTTTTTCCACTGTTCCAGTTTT268834514GACATGTTTGGTTGAAAACTTGTCCTTGTACCAATAATCTAAATGTCTTTGT
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141919.1:38436065-38436086
GAAGAGGAAGCAGGTGTAGAGTTTGAATCA38436065GACATGTTTGGTTGAAAACTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:39413677-39413698
GAAGAGGAAGCAGGTGTAGAGTTTGAATCA39413677GACATGTTTGGTTGAAAACTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141962.1:36889986-36890007
GAAGAGGAAGCAGGTGTAGAGTTTGAATCA36889986GACATGTTTGGTTGAAAACTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141979.1:37363619-37363640
GAAGAAGAAGCAGGTGTAGAGTTTGAATCA37363619GACATGTTTGGTTGAAAACTTGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAG
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143367.1:39735868-39735889
GAAGAGGAAGCAGGTGTAGAGTTTGAATCA39735868GACATGTTTGGTTGAAAACTTGAGAGAGAGAGAGAGAGAGAGAGAGGGTTGA
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143384.1:35769708-35769729
GAAGAAGAAGCAGGTGTAGAGTTTGAATCA35769708GACATGTTTGGTTGAAAACTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
Malus sylvestris genome assembly, chromosome: 10.
OU696512.1:38442311-38442332
GAAGAGGAAGCAGGTGTCGAGTTTGAATCA38442311GACATGTTTGGTTGAAAACTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
Malus domestica genome assembly, chromosome: 10.
OU696686.1:38965666-38965687
GAAGAGGAAGCAGGTGTCGAGTTTGAATCA38965666GACATGTTTGGTTGAAAACTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
Malus domestica genome assembly, chromosome: 10.
OU744551.1:38672060-38672081
GAAGAGGAAGCAGGTGTCGAGTTTGAATCA38672060GACATGTTTGGTTGAAAACTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
Malus domestica genome assembly, chromosome: 10.
OU744962.1:39839442-39839463
GAAGAGGAAGCAGGTGTAGAGTTTGAATCA39839442GACATGTTTGGTTGAAAACTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
Malus domestica genome assembly, chromosome: 10.
OU745000.1:38465736-38465757
GAAGAGGAAGCAGGTGTCGAGTTTGAATCA38465736GACATGTTTGGTTGAAAACTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
Malus x robusta genome assembly, chromosome: 4.
OY720328.1:37155112-37155133
GAAGAGGAAGCAGGTGTAGAGTTTGAATCA37155112GACATGTTTGGTTGAAAACTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
Crataegus laevigata genome assembly, chromosome: 4.
OY756941.1:37183749-37183770
GAAGAAGAAGCAGGTGTAGAATTTGAATCA37183749GACATGTTTGGTTGAAAACTTGAGAGAAAGAGAGAGAGGAGAGAGAGGGTTG
Pyrus communis genome assembly, chromosome: 3.
OY757070.1:26912625-26912646
GAAGAAGAAGCAGGTGTAGAATTTGAATCA26912625GACATGTTTGGTTGAAAACTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
Triticum timopheevii genome assembly, chromosome: 6G.
OY997272.1:193660840-193660861
AGTATCATTATGCTGCTTGAGAAGACTAAG193660840GACATGTTTGGTTGAAAACTTGGATAGTGTGCCTGGAAAAAAATAGTGCCTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/caagttttcaaccaaacatgtc
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : caagttttcaaccaaacatgtc | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.121 | 0.112 | search_plus_done; http://172.18.8.135:50400/match?q=CAAGTTTTCAACCAAACATGTC&k=0&no_gap=0&offset=0&limit=50
0.142 | 0.020 | search_minus_done; http://172.18.8.135:50400/match?q=GACATGTTTGGTTGAAAACTTG&k=0&no_gap=0&offset=0&limit=49
0.153 | 0.011 | cgi_end;

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