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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-04 07:44:23, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

BOGCS26TR BOGC Brassica oleracea genomic clone BOGCS26, genomic survey sequence.
BH472332.1:556-576
CGAAATGGTGCTATGGGCGACGTAGTTCCT556CACGGTCCAAAAGTTATGAGGTTTCCAAGTTTAGACTCGTGTTAGGCCGAA
BOGUG42TR BOGU Brassica oleracea genomic clone BOGUG42, genomic survey sequence.
BH561866.1:137-157
CGAAATGGTGCTATGGGCGACGTAGTTCCT137CACGGTCCAAAAGTTATGAGGTTTCCAAGTTTAGACTCGTGTTAGGCCGAA
BOHIV48TF BOHI Brassica oleracea genomic clone BOHIV48, genomic survey sequence.
BH573097.1:56-76
CGAAATGGTGCTATGGGCGACGTAGTTCCT56CACGGTCCAAAAGTTATGAGGTTTCCAAGTTTAGACTCGTGTTAGGCCGAA
BOMDB35TF BO_2_3_KB Brassica oleracea genomic clone BOMDB35, genomic survey sequence.
BH673426.1:363-383
CGAAATGGTGCTATGGGCGACGTAGTTCCT363CACGGTCCAAAAGTTATGAGGTTTCCAAGTTTAGACTCGTGTTAGGCCGAA
BOMLP85TF BO_2_3_KB Brassica oleracea genomic clone BOMLP85, genomic survey sequence.
BH703630.1:288-308
CGAAATGGTGCTATGGGCGACGTAGTTCCT288CACGGTCCAAAAGTTATGAGGTTTCCAAGTTTAGACTCGTGTTAGGCCGAA
odh93f02.b1 B.oleracea002 Brassica oleracea genomic, genomic survey sequence.
BH927343.1:238-258
CGAAATGGTGCTATGGGCGACGTAGTTCCT238CACGGTCCAAAAGTTATGAGGTTTCCAAGTTTAGACTCGTGTTAGGCCGAA
BONCQ37TR BO_1.6_2_KB_tot Brassica oleracea genomic clone BONCQ37, genomic survey sequence.
BZ458830.1:554-574
CGAAATGGTGCTATGGGCGACGTAGTTCCT554CACGGTCCAAAAGTTATGAGGTTTCCAAGTTTAGACTCGTGTTAGGCCGAA
Brassica napus cultivar Xiang5A chromosome 3.
CP123878.1:41128314-41128334
CGAAATAGTGCTATAGGCGACGTAGTTCCT41128314CACGGTCCAAAAGTTATGAGGTTTTCAAGTTTAGACTCGTGTTAAACTAAA
Brassica napus cultivar Xiang5A chromosome 3.
CP123878.1:41129808-41129828
CGAAATAGTGCTATAGGCGACGTAGTTCCT41129808CACGGTCCAAAAGTTATGAGGTTTTCAAGTTTAGACTCGTGTTAAACTAAA
Brassica napus cultivar Xiang5A chromosome 6.
CP123881.1:31810864-31810884
CGAAATGGTGCTATGGGCGACGTAGTTCCT31810864CACGGTCCAAAAGTTATGAGGTTTCCAAGTTTAGACTCGTTTTAGGCCGAA
Brassica napus cultivar Xiang5A chromosome 6.
CP123881.1:31812880-31812900
CGAAATGGTGCTATGGGCGACGTAGTTCCT31812880CACGGTCCAAAAGTTATGAGGTTTCCAAGTTTAGACTCGTTTTAGGCCGAA
Brassica napus cultivar Xiang5A chromosome 6.
CP123881.1:31814896-31814916
CGAAATGGTGCTATGGGCGACGTAGTTCCT31814896CACGGTCCAAAAGTTATGAGGTTTCCAAGTTTAGACTCGTTTTAGGCCGAA
Brassica napus cultivar Xiang5A chromosome 6.
CP123881.1:31819430-31819450
CGAAATGGTGCTATGGGCGACGTAGTTCCT31819430CACGGTCCAAAAGTTATGAGGTTTCCAAGTTTAGACTCGTTTTAGGCCGAA
BOGEB54TR BOGE Brassica oleracea genomic clone BOGEB54, genomic survey sequence.
BH475300.1:163-183
TTCGGCCTAACACGAGTCTAAACTTGGAAA163CCTCATAACTTTTGGACCGTGAGGAACTACGTCGCCCATAGCACCATTTCG
BOHKX78TR BOHK Brassica oleracea genomic clone BOHKX78, genomic survey sequence.
BH509486.1:345-365
TTCGGCCTAACACGAGTCTAAACTTGGAAA345CCTCATAACTTTTGGACCGTGAGGAACTACGTCGCCCATAGCACCATTTCG
BOGIS93TF BOGI Brassica oleracea genomic clone BOGIS93, genomic survey sequence.
BH606529.1:315-335
TTCGGCCTAACACGAGTCTAAACTTGGAAA315CCTCATAACTTTTGGACCGTGAGGAACTACGTCGCCCATAGCACCATTTCG
BOMDB35TR BO_2_3_KB Brassica oleracea genomic clone BOMDB35, genomic survey sequence.
BH673435.1:484-504
TTCGGCCTAACACGAGTCTAAACTTGGAAA484CCTCATAACTTTTGGACCGTGAGGAACTACGTCGCCCATAGCACCATTTCG
BOMLP85TR BO_2_3_KB Brassica oleracea genomic clone BOMLP85, genomic survey sequence.
BH703639.1:17-37
AGTCTAAACTTGGAAA17CCTCATAACTTTTGGACCGTGAGGAACTACGTCGCCCATAGCACCATTTCG
odg69a05.b1 B.oleracea002 Brassica oleracea genomic, genomic survey sequence.
BH957408.1:215-235
TTCGGCCTAACACGAGTCTAAACTTGGAAA215CCTCATAACTTTTGGACCGTGAGGAACTACGTCGCCCATAGCACCATTTCG
oeh20g02.b1 B.oleracea002 Brassica oleracea genomic, genomic survey sequence.
BH994932.1:588-608
TTTGGCCTAACACGAGTCTANACTTGGAAA588CCTCATAACTTTTGGACCGTGAGGAACTACGTCGCCCATAGCACCATTTCG
oef87d11.b1 B.oleracea002 Brassica oleracea genomic, genomic survey sequence.
BZ030299.1:615-635
TTCGGCCTACCACGAGTCTAAACTTGGAAA615CCTCATAACTTTTGGACCGTGAAGAACTACGTCGCCCATAACACCCTTTCG
JBnY035M09F Brassica napus BAC library JBnY Brassica napus genomic clone JBnY035M09, genomic survey sequence.
DU107627.1:338-358
TTCGGCCTAAAACGAGTCTAAACTTGGAAA338CCTCATAACTTTTGGACCGTGAGGAACTACGTCGCCCATAGCACCATTTCG
BoTo47P19/R BOTO1 Brassica oleracea genomic, genomic survey sequence.
FI569225.1:123-143
TTCGGCCTAACACGAGTCTAAACTTGGAAA123CCTCATAACTTTTGGACCGTGAGGAACTACGTCGCCCATAGCACCATTTCG
BOT01-29J5TR BOT01 Brassica oleracea genomic clone BOT01-29J5, genomic survey sequence.
FI694300.1:39-59
TTCGGCCTAACACGAGTCTAAACTTGGAAA39CCTCATAACTTTTGGACCGTGAGGAACTACGTCGCCCATAGCACCATTTCG
BOT01-29A10TF BOT01 Brassica oleracea genomic clone BOT01-29A10, genomic survey sequence.
FI695432.1:76-96
TTCGGCCTAACACGAGTCTAAACTTGGAAA76CCTCATAACTTTTGGACCGTGAGGAACTACGTCGCCCATAGCACCATTTCG
BOT01-42N15TR BOT01 Brassica oleracea genomic clone BOT01-42N15, genomic survey sequence.
FI706242.1:123-143
TTCGGCCTAACACGAGTCTAAACTTGGAAA123CCTCATAACTTTTGGACCGTGAGGAACTACGTCGCCCATAGCACCATTTCG
BOT01-47P19TR BOT01 Brassica oleracea genomic clone BOT01-47P19, genomic survey sequence.
FI711517.1:76-96
TTCGGCCTAACACGAGTCTAAACTTGGAAA76CCTCATAACTTTTGGACCGTGAGGAACTACGTCGCCCATAGCACCATTTCG
BOT01-75C10TF BOT01 Brassica oleracea genomic clone BOT01-75C10, genomic survey sequence.
FI726729.1:119-139
TTCGGCCTAACACGAGTCTAAACTTGGAAA119CCTCATAACTTTTGGACCGTGAGGAACTACGTCGCCCATAGCACCATTTCG
BOT01-116N9TR BOT01 Brassica oleracea genomic clone BOT01-116N9, genomic survey sequence.
FI728037.1:80-100
TTCGGCCTAACACGAGTCTAAACTTGGAAA80CCTCATAACTTTTGGACCGTGAGGAACTACGTCGCCCATAGCACCATTTCG
BOT01-78A4TR BOT01 Brassica oleracea genomic clone BOT01-78A4, genomic survey sequence.
FI731570.1:79-99
TTCGGCCTAACACGAGTCTAAACTTGGAAA79CCTCATAACTTTTGGACCGTGAGGAACTACGTCGCCCATAGCACCATTTCG
BOT01-70E5TF BOT01 Brassica oleracea genomic clone BOT01-70E5, genomic survey sequence.
FI733197.1:118-138
TTCGGCCTAACACGAGTCTAAACTTGGAAA118CCTCATAACTTTTGGACCGTGAGGAACTACGTCGCCCATAGCACCATTTCG
BOT01-104M9TF BOT01 Brassica oleracea genomic clone BOT01-104M9, genomic survey sequence.
FI751706.1:79-99
TTCGGCCTAACACGAGTCTAAACTTGGAAA79CCTCATAACTTTTGGACCGTGAGGAACTACGTCGCCCATAGCACCATTTCG
BOT01-105P22TF BOT01 Brassica oleracea genomic clone BOT01-105P22, genomic survey sequence.
FI753548.1:78-98
TTCGGCCTAACACGAGTCTAAACTTGGAAA78CCTCATAACTTTTGGACCGTGAGGAACTACGTCGCCCATAGCACCATTTCG
BOT01-107C9TF BOT01 Brassica oleracea genomic clone BOT01-107C9, genomic survey sequence.
FI754018.1:79-99
TTCGGCCTAACACGAGTCTAAACTTGGAAA79CCTCATAACTTTTGGACCGTGAGGAACTACGTCGCCCATAGCACCATTTCG
BOT01-121G20TF BOT01 Brassica oleracea genomic clone BOT01-121G20, genomic survey sequence.
FI757531.1:119-139
TTCGGCCTAACACGAGTCTAAACTTGGAAA119CCTCATAACTTTTGGACCGTGAGGAACTACGTCGCCCATAGCACCATTTCG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/cacggtccaaaagttatgagg
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : cacggtccaaaagttatgagg | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.148 | 0.140 | search_plus_done; http://172.18.8.135:50400/match?q=CACGGTCCAAAAGTTATGAGG&k=0&no_gap=0&offset=0&limit=50
0.604 | 0.456 | search_minus_done; http://172.18.8.135:50400/match?q=CCTCATAACTTTTGGACCGTG&k=0&no_gap=0&offset=0&limit=37
0.619 | 0.014 | cgi_end;

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