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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-13 19:48:26, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Cervus elaphus genome assembly, chromosome: 2.
OU343079.1:3054428-3054445
TGATGAGCAAGGACTCCCTGAATCCCACAT3054428GTCCTGTCGCTGGTCCTGGGGGGTTTTGAGGAGTCGCTGAGGTCCCTG
Pipistrellus pygmaeus genome assembly, chromosome: 13.
OX465315.1:30313382-30313399
TGATCCCGGGCAAATCTCAGCCTGTCTCTG30313382GTCCTGTCGCTGGTCCTGGTCCTGGTCCTGGTCCTGTTCCTGTTCCTG
Erinaceus europaeus genome assembly, chromosome: 8.
OX485818.1:96816-96833
CCCCTGCCCCTGTCCCTGTCCCTGTCCCTG96816GTCCTGTCGCTGGTCCTGTCCCTGCAGTCGGAAGAAAGGAGAAGCCAG
Erinaceus europaeus genome assembly, chromosome: 14.
OX485824.1:32441922-32441939
TCCTGTCCCTTGAGGTAGCTGGGCACCCCT32441922GTCCTGTCGCTGGTCCTGTGCCCAGTGTCCTGTGTGTACAGGAGAGCA
Rangifer tarandus platyrhyncus genome assembly, chromosome: 28.
OX596112.1:3110051-3110068
TGATGAGCAAGGACTGCCTGAATCCCACGT3110051GTCCTGTCGCTGGTCCTGGGGGGTTTTGAGGAGTTGCCGAGGTCCCTG
Anabas testudineus genome assembly, chromosome: 15.
LR132040.1:10451527-10451544
CGAAAACAGAGCGTCGGGCTGCGGGGGTGC10451527GTCCTGTCGCTGGTCCTGGGTTAGTGTCGGTTGTGAGTGGCTGTTCTT
Sphaeramia orbicularis genome assembly, chromosome: 8.
LR597465.1:41805674-41805691
AAAACTTTTTGCCATGAGTCTTGGTTAATT41805674GTCCTGTCGCTGGTCCTGACCACAGTTCTGAAGAAGAGCTGGAGATGG
Sphaeramia orbicularis genome assembly, chromosome: 8.
LR597465.1:41928021-41928038
AAAACTTTTTGCCATGAGTCTTGGTTAATT41928021GTCCTGTCGCTGGTCCTGACCACAGTTCTGAAGAAGAGCTGGAGATGG
Borostomias antarcticus genome assembly, chromosome: 2.
OX465205.1:33017806-33017823
TCCCGTGGCGGCCAGGCGGCGAGGACCATG33017806GTCCTGTCGCTGGTCCTGAAGCTGCTCAACGTGCTGCTCCAGCCCGCC
Gobius niger genome assembly, chromosome: 8.
OX637602.1:23068160-23068177
CATCCAGGAGTGGACTAGGGAGAGAACAGG23068160GTCCTGTCGCTGGTCCTGTTGGAGCTGCTGAGGGTCGATGATCTCTTG
Gobius niger genome assembly, chromosome: 13.
OX637607.1:15601758-15601775
CATCCAGGAGTGGACTAGGGAGAGAACAGG15601758GTCCTGTCGCTGGTCCTGTTGGAGCTGCTGAGGGTCGATGATCTCTTG
Cinclus cinclus genome assembly, chromosome: 9.
OY759686.1:10430334-10430351
CCCTGACTCGGCTTCATTCTGTTCCCTTGG10430334GTCCTGTCGCTGGTCCTGAGAGGGAAGAGGCTGATGTTTGCCTCTTCA
Echiichthys vipera genome assembly, chromosome: 17.
OY829662.1:841449-841466
GTCCTGTCCCTGGTCATGGTTCTGTCCCAG841449GTCCTGTCGCTGGTCCTGTCCCTGGTCCTGTCCCTGGTCATGGTTCTG
Echiichthys vipera genome assembly, chromosome: 17.
OY829662.1:841503-841520
GTCCTGTCCCTGGTCATGGTTCTGTCCCAG841503GTCCTGTCGCTGGTCCTGTCCCTGGTTCTGTCCCTGGTCCTGTCCCTG
c4c18up.r1 Fiddler crab late proecdysial limb bud cDNA library Leptuca pugilator cDNA clone c4c18up 5', mRNA sequence.
EV249335.1:427-444
GGTCCAACCCAGTGAATGAGGTCCAGTATT427GTCCTGTCGCTGGTCCTGTGTTGGTGTTGTACGGTCGCCTCAAAAAGT
Marinobacter nanhaiticus D15-8W DNA, complete genome.
AP028878.1:265810-265827
CAACTCATGCCGCTGGCCGGCGGTGCGCTG265810GTCCTGTCGCTGGTCCTGATCCTGTTTGCCCGTCCCCTGGCTGTCTTC
Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequence.
CP000759.1:225205-225222
GCACTTCTCCTGACCTGCGTACTGATCTTC225205GTCCTGTCGCTGGTCCTGCTCGGCTACACGATCTCGACAGCATCGCGC
Burkholderia cepacia ATCC 25416 strain UCB 717 chromosome 3, complete sequence.
CP012983.1:1007560-1007577
CAGGCCGGCGACACCGCCGTGCTGTTCACC1007560GTCCTGTCGCTGGTCCTGGCCGAGTTGCCGCCCGACACGCGCAACCTG
Streptomyces lydicus strain 103 chromosome, complete genome.
CP017157.1:4402382-4402399
CTGCGCACCGTGTTCGGGGTTCCCGGCGAC4402382GTCCTGTCGCTGGTCCTGCTCATCCTGCAGCTCACCGCCTCGGGCGGG
Burkholderia cepacia strain FDAARGOS_388 chromosome 3, complete sequence.
CP023520.1:1050400-1050417
CAGGCCGGCGACACCGCCGTGCTGTTCACC1050400GTCCTGTCGCTGGTCCTGGCCGAGTTGCCGCCCGACACGCGCAACCTG
Burkholderia cepacia ATCC 25416 chromosome 3, complete sequence.
CP034555.1:792772-792789
CAGGCCGGCGACACCGCCGTGCTGTTCACC792772GTCCTGTCGCTGGTCCTGGCCGAGTTGCCGCCCGACACGCGCAACCTG
Brucella anthropi strain T16R-87 chromosome 2, complete sequence.
CP044971.1:794106-794123
GCACTTCTCCTGACCTGCGTGCTGATCTTC794106GTCCTGTCGCTGGTCCTGCTCGGCTACACGATCTCGACGGCATCGCGC
Burkholderia cepacia strain BC16 chromosome 3, complete sequence.
CP045237.1:339295-339312
CAGGCCGGCGATACCGCCGTGCTGTTCACC339295GTCCTGTCGCTGGTCCTGGCCGAGTTGCCGCCCGACACGCGCAACCTG
Ochrobactrum sp. MT180101 chromosome 2, complete sequence.
CP061773.1:945241-945258
GCACTTCTCCTGACCTGCGTGCTGATCTTC945241GTCCTGTCGCTGGTCCTGCTCGGCTACACGATCTCGACGGCATCGCGC
Brucella anthropi strain FDAARGOS_1039 chromosome 2, complete sequence.
CP066053.1:496480-496497
GCACTTCTCCTGACCTGCGTACTGATCTTC496480GTCCTGTCGCTGGTCCTGCTCGGCTACACGATCTCGACAGCATCGCGC
Streptomyces sp. 135 chromosome, complete genome.
CP075691.1:801043-801060
ACGACGCTCGGCATCCTGCTCTCCGCGCTC801043GTCCTGTCGCTGGTCCTGGTGCCCGCGCTGGCCGCGCTCCTCGGCCGG
Burkholderia cepacia strain 2011Ycf793I chromosome 2, complete sequence.
CP090731.1:943191-943208
CAGGCCGGCGATACCGCCGTGCTGTTCACC943191GTCCTGTCGCTGGTCCTGGCCGAGTTGCCGCCCGACACGCGCAACCTG
Burkholderia cepacia strain BRDJ chromosome 1, complete sequence.
CP095496.1:734725-734742
CAGGCCGGCGACACCGCCGTGCTGTTCACC734725GTCCTGTCGCTGGTCCTGGCCGAGTTGCCGCCCGACACGCGCAACCTG
Streptomyces sp. NBC_00597 plasmid unnamed1, complete sequence.
CP107758.1:325236-325253
ATGACGCTCGGCATCCTGCTCTCGGCGCTC325236GTCCTGTCGCTGGTCCTGGTCCCCGCCCTCGCCGCACTCCTCGGCAGG
Amycolatopsis sp. NBC_00348 chromosome, complete genome.
CP107994.1:786888-786905
GACACCGTCACCCGCGACAAGCGCACCATG786888GTCCTGTCGCTGGTCCTGAACTGGGTCCTCGGCCCGGCGCTGATGTTC
Streptomyces caniferus strain NBC_00314 chromosome, complete genome.
CP108029.1:8318373-8318390
CTGCGCACCGTCTTCGGGGTGCCCGGCGAC8318373GTCCTGTCGCTGGTCCTGCTCATCCTGCAGCTCACCGCCTCGGGCGGC
Streptomyces sp. NBC_00272 plasmid unnamed1, complete sequence.
CP108069.1:394744-394761
ATGACGCTCGGCATCCTGCTCTCGGCGCTC394744GTCCTGTCGCTGGTCCTGGTCCCCGCCCTCGCCGCACTCCTCGGCAGG
Streptomyces sp. NBC_00211 plasmid unnamed1, complete sequence.
CP108119.1:256729-256746
ATGACGCTCGGCATCCTGCTCTCGGCGCTC256729GTCCTGTCGCTGGTCCTGGTCCCCGCCCTCGCCGCACTCCTCGGCAGG
Streptomyces sp. NBC_00073 plasmid unnamed1, complete sequence.
CP108245.1:259272-259289
ATGACGCTCGGCATCCTGCTCTCGGCGCTC259272GTCCTGTCGCTGGTCCTGGTCCCCGCCCTCGCCGCACTCCTCGGCAGG
Streptomyces sp. NBC_00045 plasmid unnamed1, complete sequence.
CP108272.1:277114-277131
ATGACGCTCGGCATCCTGCTCTCGGCGCTC277114GTCCTGTCGCTGGTCCTGGTCCCCGCCCTCGCCGCACTCCTCGGCAGG
Streptomyces sp. NBC_01278 plasmid unnamed1, complete sequence.
CP108440.1:436836-436853
ATGACGCTCGGCATCCTGCTCTCGGCGCTC436836GTCCTGTCGCTGGTCCTGGTCCCCGCCCTCGCCGCACTCCTCGGCAGG
Streptomyces caniferus strain NBC_01256 chromosome, complete genome.
CP108473.1:8231091-8231108
CTGCGCACCGTCTTCGGGGTGCCCGGCGAC8231091GTCCTGTCGCTGGTCCTGCTCATCCTGCAGCTCACCGCCTCGGGCGGC
Streptomyces sp. NBC_01205 plasmid unnamed1, complete sequence.
CP108558.1:300335-300352
ATGACGCTCGGCATCCTGCTCTCGGCGCTC300335GTCCTGTCGCTGGTCCTGGTCCCCGCCCTCGCCGCACTCCTCGGCAGG
Streptomyces cinnabarinus strain DSM 40467 chromosome.
CP114413.1:7977631-7977648
TACCCGGGCGACATCCTCATGACCTACGCG7977631GTCCTGTCGCTGGTCCTGTACGGCCTGCGCGGCCTCGCCCCGCGCATC
Brucella anthropi strain MWF001 chromosome 1, complete sequence.
CP130430.1:548207-548224
GCACTTCTCCTGACCTGCGTGCTGATCTTC548207GTCCTGTCGCTGGTCCTGCTCGGCTACACGATCTCGACGGCATCGCGC
[Empedobacter] haloabium strain ATCC 31962 chromosome, complete genome.
CP136508.1:2828111-2828128
GGCGACGTGGCCGGGGCGCTGTTCTACACG2828111GTCCTGTCGCTGGTCCTGACCACGGCCGGCTTCACGTTTCTCTACCTG
Nocardioides sp. HM61 chromosome, complete genome.
CP141059.1:3331801-3331818
TGGTCGCGACCGAAGACCTGGGTCGTCCTC3331801GTCCTGTCGCTGGTCCTGCTGTGGGTCGTCTACATCGTCGCGGTGCCG
Fretibacterium fastidiosum draft genome.
FP929056.1:1037656-1037673
GCCGTTCATACCGCCGTCGTTGCCACAGTC1037656GTCCTGTCGCTGGTCCTGTCCGCCGCAGGGTATGTGGCGACGCCCGCA
Gibbula magus genome assembly, chromosome: 4.
OW388292.1:25335884-25335901
ACGCTGATCTTGAGACAGAACCAAGCGCTG25335884GTCCTGTCGCTGGTCCTGTCGCTGGTCCTGTCGTTGGTCTTGCCGTTG
Gibbula magus genome assembly, chromosome: 4.
OW388292.1:25335896-25335913
AGACAGAACCAAGCGCTGGTCCTGTCGCTG25335896GTCCTGTCGCTGGTCCTGTCGTTGGTCTTGCCGTTGGTCCTGATGCTG
Gibbula magus genome assembly, chromosome: 4.
OW388292.1:86402053-86402070
ACGCTGATCTTGAGACAGAACCAAGCGCTG86402053GTCCTGTCGCTGGTCCTGTCGCTGGTCCTGTCGTTGGTCTTGCCGTTG
Gibbula magus genome assembly, chromosome: 4.
OW388292.1:86402065-86402082
AGACAGAACCAAGCGCTGGTCCTGTCGCTG86402065GTCCTGTCGCTGGTCCTGTCGTTGGTCTTGCCGTTGGTCCTGATGCTG
Gibbula magus genome assembly, chromosome: 5.
OW388293.1:51517793-51517810
ACGCTGATCTTGAGACAGAACCAAGCGCTG51517793GTCCTGTCGCTGGTCCTGTCGCTGGTCCTGTCGTTGGTCTTGCCGTTG
Gibbula magus genome assembly, chromosome: 5.
OW388293.1:51517805-51517822
AGACAGAACCAAGCGCTGGTCCTGTCGCTG51517805GTCCTGTCGCTGGTCCTGTCGTTGGTCTTGCCGTTGGTCCTGATGCTG
Gibbula magus genome assembly, chromosome: 8.
OW388296.1:23523536-23523553
ACGCTGATCTTGAGACAGAACCAAGCGCTG23523536GTCCTGTCGCTGGTCCTGTCGTTGGTCTTGCCGTTGGTCCTGATGCTG
Gibbula magus genome assembly, chromosome: 8.
OW388296.1:60149800-60149817
ACGCTGATCTTGAGACAGAACCAAGCGCTG60149800GTCCTGTCGCTGGTCCTGTCGCTGGTCCTGTCGTTGGTCTTGCCGTTG
Gibbula magus genome assembly, chromosome: 8.
OW388296.1:60149812-60149829
AGACAGAACCAAGCGCTGGTCCTGTCGCTG60149812GTCCTGTCGCTGGTCCTGTCGTTGGTCTTGCCGTTGGTCCTGATGCTG
Gibbula magus genome assembly, chromosome: 15.
OW388303.1:60225604-60225621
CTCCCGATAGAAGTCATCACGTGAGCGCTG60225604GTCCTGTCGCTGGTCCTGTCACAGGTCCTGACGTTGGTCATGTTGCTG
Gibbula magus genome assembly, chromosome: 18.
OW388306.1:27086320-27086337
ACGCTGATCTTGAGACAGAACCAAGCGCTG27086320GTCCTGTCGCTGGTCCTGTCGCTGGTCCTGTCGTTGGTCTTGCCGTTG
Gibbula magus genome assembly, chromosome: 18.
OW388306.1:27086332-27086349
AGACAGAACCAAGCGCTGGTCCTGTCGCTG27086332GTCCTGTCGCTGGTCCTGTCGTTGGTCTTGCCGTTGGTCCTGATGCTG
Anorthoa munda genome assembly, chromosome: 3.
OX243896.1:3888283-3888300
CCAATAGTAGAGAAGATCGGGTTCCTACCC3888283GTCCTGTCGCTGGTCCTGTTCATCGTGGCGTACTGCTGGGGTCTGGGA
Protonemura montana genome assembly, chromosome: 3.
OX387605.1:24836356-24836373
GTTCAACGCGAACGGGAAATTGCTAACGGC24836356GTCCTGTCGCTGGTCCTGCGATTGCGCCGTCGCCAGGTCGTCGGGTCT
Heteromyza rotundicornis genome assembly, chromosome: 1.
OX596010.1:4051892-4051909
TATGACAATAATCTGTATTCAGTTGTTTTG4051892GTCCTGTCGCTGGTCCTGCTGCAAAATGCATTCAACCGGAAATGCATA
Drosophila subobscura genome assembly, chromosome: O.
OY757196.1:4930164-4930181
TACTGCTGCTGCTGTTGCAGCTGCTGTTCC4930164GTCCTGTCGCTGGTCCTGGTCCTGGTCCTGTGTTCACTCCTGCACTCC
Drosophila subobscura genome assembly, chromosome: O.
OY757496.1:3205297-3205314
TACTGCTGCTGCTGTTGCAGCTGCTGTTCC3205297GTCCTGTCGCTGGTCCTGGTCCTGGTCCTGTGTTCACTCCTGCACTCC
Chorisops tibialis genome assembly, chromosome: 2.
OY770263.1:191250978-191250995
ATCGAAGCGCTGCCGCTGGTCCTGACGCTG191250978GTCCTGTCGCTGGTCCTGACGCTGGTCCTGACGCTGGTCCTGACGCTG
Chorisops tibialis genome assembly, chromosome: 2.
OY770263.1:191251026-191251043
ACGCTGGTCCTGACGCTGGTCCTGACGCTG191251026GTCCTGTCGCTGGTCCTGCCGCTGATGCTGCCGCTGGTCCTGCCGCTG
Chorisops tibialis genome assembly, chromosome: 2.
OY770263.1:261151650-261151667
TCGCTGCTCCTGCCGCTGGTCCTGACGCTG261151650GTCCTGTCGCTGGTCCTGCCGCTGATGCTGCCGCTGGTCCTGCCGCTG
Priocnemis perturbator genome assembly, chromosome: 5.
OZ012647.1:474909-474926
ATATACATCATGAAGTATGTGAGGTGCCTG474909GTCCTGTCGCTGGTCCTGAGCGGTGTCTGTAGATGAAAATATGAAATA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/gTCCTGTCGCTgGTCCTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : gTCCTGTCGCTgGTCCTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.243 | 0.234 | search_plus_done; http://172.18.8.135:50400/match?q=GTCCTGTCGCTGGTCCTG&k=0&no_gap=0&offset=0&limit=50
0.302 | 0.059 | search_minus_done; http://172.18.8.135:50400/match?q=CAGGACCAGCGACAGGAC&k=0&no_gap=0&offset=0&limit=0
0.302 | 0.000 | cgi_end;

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