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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 04:39:11, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Mdfw2012c17.y1 Mdfw Malus domestica cDNA clone Mdfw2012c17 5', mRNA sequence.
CN492863.1:28-47
TCAAAGATTCAAGATTGAAGACGGAGA28GAAACAGGCGCCATTATTTGCCTTGCTCTCTCTCTCTCTCTCTCTCTCTC
Mdfw2045j11.y1 Mdfw Malus domestica cDNA clone Mdfw2045j11 5', mRNA sequence.
CN996504.1:26-45
AAAGATTCAAGATTGAAGACGGAGA26GAAACAGGCGCCATTATTTGCCTTGCTCTCTCTCTCTCTCTCTCTCTCTC
Mddb5024e21.y1 Mddb Malus domestica cDNA clone Mddb5024e21 5', mRNA sequence.
CO903877.1:22-41
ATTCAAGATTGAAGACGGAGA22GAAACAGGCGCCATTATTTGCCTTGCTCTCTCTCTCTCTCTCTCTCTCTC
Mdrtp1001N10.g1 Apple_EST_Mdrtp Malus domestica x Malus sieversii cDNA, mRNA sequence.
DT040217.1:51-70
TCATCAAAGATTCAAGATTGAAGACGGAGA51GAAACAGGCGCCATTATTTGCCTTGCTCTCTCTCTCTCTCTCTCTCTCTC
Mdfwf2084P06.g1 Apple_EST_Mdfwf Malus domestica cDNA 5', mRNA sequence.
GO512162.1:47-66
GTCGCAAATTTTCAAGATTGAAGACGGAGA47GAAACAGGCGCCATTATTTGCCTTGCTCTCTCTCTCTCTCTCTCTCTCTC
Malus hybrid cultivar cultivar Royalty chromosome 2.
CP141954.1:25538685-25538704
TCATCAAAGATTCAAGATTGAAGACGGAGA25538685GAAACAGGCGCCATTATTTGCCTTGATCTCTCTCTCTCTCTCTCTCGAAC
Malus hybrid cultivar cultivar Royalty chromosome 2.
CP141971.1:25979092-25979111
TCATCAAAGATTCAAGATTGAAGACGGAGA25979092GAAACAGGCGCCATTATTTGCCTTGATCTCTCTCTCTCTCGAACTTTGTG
Malus hybrid cultivar cultivar SH6 chromosome 2.
CP143359.1:28340773-28340792
TCATCAAAGATTCAAGATTGAAGACGGAGA28340773GAAACAGGCGCCATTATTTGCCTTGCTCTCTCTCTCTCTCTCTCTCTCTC
Malus hybrid cultivar cultivar SH6 chromosome 2.
CP143376.1:26939246-26939265
TCATCAAAGATTCAAGATTGAAGACGGAGA26939246GAAACAGGCGCCATTATTTGCCTTGCTCTCTCTCTCTCTCTCTCTCTCTA
Malus sylvestris genome assembly, chromosome: 2.
OU696504.1:27610344-27610363
TCATCAAAGATTCAAGATTGAAGACGGAGA27610344GAAACAGGCGCCATTATTTGCCTTGCTCTCTCTCTCTCTCTCTCTCTCGA
Malus domestica genome assembly, chromosome: 2.
OU696678.1:27389647-27389666
TCATCAAAGATTCAAGATTGAAGACGGAGA27389647GAAACAGGCGCCATTATTTGCCTTGCTCTCTCTCTCTCTCTCTCTCTCTC
Malus domestica genome assembly, chromosome: 2.
OU744543.1:27873556-27873575
TCATCAAAGATTCAAGATTGAAGACGGAGA27873556GAAACAGGCGCCATTATTTGCCTTGCTCTCTCTCTCTCTCTCTCTCTCTC
Malus domestica genome assembly, chromosome: 2.
OU744954.1:27414616-27414635
TCATCAAAGATTCAAGATTGAAGACGGAGA27414616GAAACAGGCGCCATTATTTGCCTTGCTCTCTCTCTCTCTCTCTCTCTCTC
Malus domestica genome assembly, chromosome: 2.
OU744992.1:28157423-28157442
TCATCAAAGATTCAAGATTGAAGACGGAGA28157423GAAACAGGCGCCATTATTTGCCTTGCTCTCTCTCTCTCTCTCTCTCTCTC
Pyrus communis genome assembly, chromosome: 10.
OY757077.1:19976772-19976791
TCATCAAAGATTCAAGATTAAAGACGGAGA19976772GAAACAGGCGCCATTATTTGCCTCGCTCTCTCTCTCTCTCTCTCTCTCTC
Spisula subtruncata genome assembly, chromosome: 4.
OY787663.1:11256321-11256340
TCTTCAAGAATCATTTACTGCCATCAAGAG11256321GAAACAGGCGCCATTATTTGAAGAGTAGGAATCTACTAGAGCGAAGTTAA
Sepia lycidas genome assembly, chromosome: 32.
OZ010602.1:3084711-3084730
TGATAAATCTTAATGGCAATAAAAGTTGAG3084711GAAACAGGCGCCATTATTTGCAAGAAAGCTACGAATTTTCTTGGCAGCGT
Malus hybrid cultivar cultivar Flame chromosome 2.
CP141911.1:9626687-9626706
AAGTTCGAGAGAGAGGGAGAGAGATCAAGG9626687CAAATAATGGCGCCTGTTTCTCTCCGTCTTCAATCTTGAATCTTTGATGA
Malus hybrid cultivar cultivar Flame chromosome 2.
CP141928.1:10404177-10404196
GAGAGAGAGAGAGAGAGAGAGAGAGCAAGG10404177CAAATAATGGCGCCTGTTTCTCTCCGTCTTCAATCTTGAATCTTTGATGA
Malus x robusta genome assembly, chromosome: 7.
OY720331.1:10106408-10106427
AAGTTCGAGAGAGAGGGAGAGAGATCAAGG10106408CAAATAATGGCGCCTGTTTCTCTCCGTCTTCAATCTTGAATCTTTGATGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/gaaacaggcgccattatttg
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : gaaacaggcgccattatttg | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.357 | 0.348 | search_plus_done; http://172.18.8.135:50400/match?q=GAAACAGGCGCCATTATTTG&k=0&no_gap=0&offset=0&limit=50
0.391 | 0.035 | search_minus_done; http://172.18.8.135:50400/match?q=CAAATAATGGCGCCTGTTTC&k=0&no_gap=0&offset=0&limit=33
0.393 | 0.002 | cgi_end;

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