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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-16 18:59:53, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Onychomys torridus genome assembly, chromosome: 23.
LR877210.1:31986212-31986229
TCGCCACAGGTCTCTGATCTCTGTTAGCCC31986212TCATGAGTCCCAATCAGTTGATTCTGTGAGCCATATTCTTTTGGTATC
Acomys russatus genome assembly, chromosome: 31.
LR877242.1:15439000-15439017
CCTTCCAGGCTCTTTGATCTCTGTGAGCCC15439000TCATGAGTCCCAATCAGTTGATGCTGTGGGCCATGTTCTCAAGTGGTG
Acomys kempi genome assembly, chromosome: 15.
OU015369.1:53005938-53005955
CCTTCCAGGCTCTCCGATCTCTGTGAGCCC53005938TCATGAGTCCCAATCAGTTGATGCTGTGGGCCATGTTCTAAAGTGGTG
Acomys dimidiatus genome assembly, chromosome: 15.
OU015388.1:53698347-53698364
CCTTCCAGGCTCTCCGATCTCTGTGAGCCC53698347TCATGAGTCCCAATCAGTTGATGCTGTGGGCCATGTTCTAAAGTGGTG
Onychomys arenicola genome assembly, chromosome: 23.
OX460369.1:36879621-36879638
TCCCCACAGGTCTCTGATCTCTGTTAGCCC36879621TCATGAGTCCCAATCAGTTGATTCTGTGAGCCATATTCTTTTAGTATC
Onychomys leucogaster genome assembly, chromosome: 23.
OX460393.1:35839573-35839590
TACCCACAGGTCTCTGATCTCTGTTAGCCC35839573TCATGAGTCCCAATCAGTTGATTCTGTGAGCCATATTCTTTTGGTAAC
Onychomys leucogaster genome assembly, chromosome: 23.
OX460440.1:36057051-36057068
TCCCCACAGGTCTCTGATCTCTGTTAGCCC36057051TCATGAGTCCCAATCAGTTGATTCTGTGAGCCATATTATTTTGGTAAC
Onychomys arenicola genome assembly, chromosome: 23.
OX460464.1:34540543-34540560
TCCCCACAGGTCTCTGATCTCTGTTAGCCC34540543TCATGAGTCCCAATCAGTTGATTCTGTGAGCCATATTCTTTTGGTATC
Onychomys torridus genome assembly, chromosome: 23.
OX460904.1:31986212-31986229
TCGCCACAGGTCTCTGATCTCTGTTAGCCC31986212TCATGAGTCCCAATCAGTTGATTCTGTGAGCCATATTCTTTTGGTATC
Carassius carassius genome assembly, chromosome: 18.
OY720485.1:17695610-17695627
GCTCTCAGAAATGAAAAATAATCATAATTC17695610TCATGAGTCCCAATCAGTCTCTAGCAGCTAGCGTTACTACCATTCTGC
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_5445.
FX694353.1:1572-1589
ACCATAGCCATAAGAATTTTAGTGGGCGAA1572TCATGAGTCCCAATCAGTAACCCTTCTTCAACTTCTGATGGTGGCATC
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_32411.
FX727172.1:1759-1776
ACCATAGCCATAAGAATTTTAGTGGGCGAA1759TCATGAGTCCCAATCAGTAACCCTTCTTCAACTTCTGATGGTGGCATC
Forward strand read from insert in 5'HPRT insertion targeting and chromosome engineering clone MHPN275c10.
BX977515.1:236-253
CAATTGAGGCTCTCTGATTTCTGTGAGTTC236TCATGAGTCCCAATCAGTTGATTCAGTGATATCCCAGAGACTACTTGT
Mus musculus clone RP23-63J14, LOW-PASS SEQUENCE SAMPLING.
AC100233.1:12565-12582
CAATTGAGGCTCTCTGATTTCTGTGAGTTC12565TCATGAGTCCCAATCAGTTGATTCAGTGATATCCCAGAGACTACTTGT
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB005I07, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces.
AC232441.1:130159-130176
ATACTCACCATAAGAATTTTAGTGGGCGAA130159TCATGAGTCCCAATCAGTAACCCTTCTTCAACTTCTGATGGTGGCATC
Alisma plantago-aquatica genome assembly, chromosome: 4.
OY856412.1:170338494-170338511
CTATGGATTCATCAACAACCCATATGGTAG170338494TCATGAGTCCCAATCAGTGTTCAGGAAATCGGTCCGTGCGGCCGCATA
Nostoc sp. C057 chromosome, complete genome.
CP040281.1:5181110-5181127
CGAATTGTTAACTCTTTTCTTAAATAAAGG5181110TCATGAGTCCCAATCAGTGCAACTGGAATAATCGGTACACCAGCCCGC
Nostoc sp. ATCC 53789 chromosome, complete genome.
CP046703.1:4538355-4538372
CGAATTGTTAACTCTTTTCTTAAATAGAGG4538355TCATGAGTCCCAATCAGTGCAACTGGAATAATCGGTACACCAGCCCGC
Volucella inanis genome assembly, chromosome: 1.
OU026153.1:187782353-187782370
TGTTTCTGTGATTTTGTCACAGAATGATCT187782353TCATGAGTCCCAATCAGTCACTTATCTTGTGCTTTTTGCTAGGTTGAA
Macaca fascicularis complete genome, chromosome chr1.
LT160000.1:37161757-37161774
ACATGCCCTTTGTCCCAGGCTCCTAAGTCT37161757ACTGATTGGGACTCATGATCTAGTCCAGACCATCTTCTAATGGGAGTT
Mouse DNA sequence from clone RP23-199A12 on chromosome X.
AL731791.16:22954-22971
ACAAGTAGTCTCTGGGATATCACTGAATCA22954ACTGATTGGGACTCATGAGAACTCACAGAAATCAGAGAGCCTCAATTG
Mouse DNA sequence from clone RP23-265N8 on chromosome X.
AL772200.10:136141-136158
ACAAGTAGTCTCTGGGATATCACTGAATCA136141ACTGATTGGGACTCATGAGAACTCACAGAAATCAGAGAGCCTCAATTG
Mouse DNA sequence from clone RP23-284G7 on chromosome X.
BX004809.15:16670-16687
ACAAGTAGTCTCTGGGATATCACTGAATCA16670ACTGATTGGGACTCATGAGAACTCACAGAAATCAGAGAGCCTCAATTG
Onychomys torridus genome assembly, chromosome: 12.
LR877199.1:46015120-46015137
GACACATCAAGAACATGGTCGACAGAATCA46015120ACTGATTGGGACTCATGAGGATTCACAGAGATCAGAGAGCCTGTATGG
Acomys russatus genome assembly, chromosome: 2.
LR877213.1:76475360-76475377
GAGAAGAGGAGAATATGGCCCACAGCATCA76475360ACTGATTGGGACTCATGAAAACTTGCAGAGATCAGGGAGACTGTATGG
Mus musculus domesticus genome assembly, chromosome: X.
OW971631.1:126965027-126965044
ACAAGTAGTCTCTGGGATATCACTGAATCA126965027ACTGATTGGGACTCATGAGAACTCACAGAAATCAGAGAGCCTCAATTG
Mus musculus molossinus genome assembly, chromosome: X.
OW971657.1:161982136-161982153
ACAAGTAGTCTCTGGGATATCACTGAATCA161982136ACTGATTGGGACTCATGAGAACTCACAGAAATCAGAGAGCCTCAATTG
Mus musculus genome assembly, chromosome: X.
OW971787.1:126703963-126703980
ACAAGTAGTCTCTGGGATATCACTGAATCA126703963ACTGATTGGGACTCATGAGAACTCACAGAAATCAGAGAGCCTCAATTG
Mus musculus genome assembly, chromosome: X.
OW971806.1:140676801-140676818
ACAAGTAGTCTCTGGGATATCACTGAATCA140676801ACTGATTGGGACTCATGAGAACTCACAGAAATCAGAGAGCCTCAATTG
Mus musculus genome assembly, chromosome: X.
OW971806.1:141758664-141758681
ACAAGTAGTCTCTGGGATATCACTGAATCA141758664ACTGATTGGGACTCATGAGAACTCACAGAAATCAGAGAGCCTCAATTG
Mus musculus genome assembly, chromosome: X.
OW971806.1:142486316-142486333
ACAAGTAGTCTCTGGGATATCACTGAATCA142486316ACTGATTGGGACTCATGAGAACTCACAGAAATCAGAGAGCCTCAATTG
Mus musculus genome assembly, chromosome: X.
OX389794.1:152535820-152535837
ACAAGTAGTCTCTGGGATATCACTGAATCA152535820ACTGATTGGGACTCATGAGAACTCACAGAAATCAGAGAGCCTCAATTG
Mus musculus genome assembly, chromosome: X.
OX389794.1:152943210-152943227
ACAAGTAGTCTCTGGGATATCACTGAATCA152943210ACTGATTGGGACTCATGAGAACTCACAGAAATCAGAGAGCCTCAATTG
Mus musculus genome assembly, chromosome: X.
OX390164.1:147978209-147978226
ACAAGTAGTCTCTGGGATATCACTGAATCA147978209ACTGATTGGGACTCATGAGAACTCACAGAAATCAGAGAGCCTCAATTG
Mus musculus genome assembly, chromosome: X.
OX390164.1:148438729-148438746
ACAAGTAGTCTCTGGGATATCACTGAATCA148438729ACTGATTGGGACTCATGAGAACTCACAGAAATCAGAGAGCCTCAATTG
Mus musculus genome assembly, chromosome: X.
OX390164.1:149282111-149282128
ACAAGTAGTCTCTGGGATATCACTGAATCA149282111ACTGATTGGGACTCATGAGAACTCACAGAAATCAGAGAGCCTCAATTG
Mus musculus genome assembly, chromosome: X.
OX439016.1:145103244-145103261
ACAAGTAGTCTCTGGGATATCACTGAATCA145103244ACTGATTGGGACTCATGAGAACTCACAGAAATCAGAGAGCCTCAATTG
Mus musculus genome assembly, chromosome: X.
OX439016.1:146184608-146184625
ACAAGTAGTCTCTGGGATATCACTGAATCA146184608ACTGATTGGGACTCATGAGAACTCACAGAAATCAGAGAGCCTCAATTG
Mus musculus genome assembly, chromosome: X.
OX439016.1:146889755-146889772
ACAAGTAGTCTCTGGGATATCACTGAATCA146889755ACTGATTGGGACTCATGAGAACTCACAGAAATCAGAGAGCCTCAATTG
Onychomys arenicola genome assembly, chromosome: 12.
OX460358.1:53886740-53886757
GGAACATCAAGAACATGGCCCACAGAATCA53886740ACTGATTGGGACTCATGAGGATTCACAGAGATCAGAGAGCCTGTATGG
Onychomys leucogaster genome assembly, chromosome: 12.
OX460382.1:63175850-63175867
GACACATCAAGAACATGGTCGACAGAATCA63175850ACTGATTGGGACTCATGAGGATTCACAGAGATCAGAGAGCCTGTATGG
Onychomys leucogaster genome assembly, chromosome: 12.
OX460429.1:56790345-56790362
GACACATCAAGAACATGGTCGACAGAATCA56790345ACTGATTGGGACTCATGAGGATTCACAGAGATCAGAGAGCCTGTATGG
Onychomys arenicola genome assembly, chromosome: 12.
OX460453.1:57744962-57744979
GGAACATCAAGAACATGGCCCACAGAATCA57744962ACTGATTGGGACTCATGAGGATTCACAGAGATCAGAGAGCCTGTATGG
Onychomys torridus genome assembly, chromosome: 12.
OX460893.1:46015120-46015137
GACACATCAAGAACATGGTCGACAGAATCA46015120ACTGATTGGGACTCATGAGGATTCACAGAGATCAGAGAGCCTGTATGG
Sciaenops ocellatus chromosome 21.
CP136886.1:18483843-18483860
AGAAAAGCAGATTGCAATATTATACAAGCA18483843ACTGATTGGGACTCATGATCAATAATAACTCAATCAGTTCACATGGCG
Scophthalmus maximus genome assembly, chromosome: 15.
OY978266.1:18826134-18826151
TGACCATGGAGTTGACACCAATGTGAGTTC18826134ACTGATTGGGACTCATGACTAGTTTAAAAGTCAATGGTACAGTATACC
KR 1020210025055-A/3: COMPOUNDS AND METHODS FOR REDUCING LRRK2 EXPRESSION.
OF232994.1:15132-15149
TGTTTGGGGCAAGTTATCTAGGGTAGAAGT15132ACTGATTGGGACTCATGAAATTGTAATAAAGTGAACTGAGAATTTATC
Sequence 3 from patent US 11332746.
OO176854.1:15432-15449
TGTTTGGGGCAAGTTATCTAGGGTAGAAGT15432ACTGATTGGGACTCATGAAATTGTAATAAAGTGAACTGAGAATTTATC
MUGQ_CH252P271E20T7_CN566_076 CHORI-252 Vervet Monkey Library Chlorocebus aethiops genomic clone CH252-271E20, genomic survey sequence.
ER879941.1:141-158
ACATGCCCTTTGTCCCAGGCTCCTGAGTCT141ACTGATTGGGACTCATGATCTAGTCCAGACCATCTTCTAATGCGAGTT
BOT01-92O1TR BOT01 Brassica oleracea genomic clone BOT01-92O1, genomic survey sequence.
FI742079.1:281-298
GATGCCACCATCAGAAGTTGAAGAAGGGTT281ACTGATTGGGACTCATGATTCGCCAACTAAAATTCTTATGGTGAGTAT
Papio anubis clone RP41-308I20, WORKING DRAFT SEQUENCE, 2 ordered pieces.
AC150018.2:182045-182062
TGTTTGGGGCAAGTTATCTAGGGTAGAAGT182045ACTGATTGGGACTCATGAAATTGTAATAAAGTGAACTGGGAATTTATC
Papio anubis clone RP41-13P4, WORKING DRAFT SEQUENCE, 3 ordered pieces.
AC150836.2:143877-143894
TGTTTGGGGCAAGTTATCTAGGGTAGAAGT143877ACTGATTGGGACTCATGAAATTGTAATAAAGTGAACTGGGAATTTATC
Macaca mulatta clone CH250-77C14, WORKING DRAFT SEQUENCE, 2 ordered pieces.
AC169821.2:102362-102379
TGTTTGGGGCAAGTTATCTAGGGTAGAAGT102362ACTGATTGGGACTCATGAAATTGTAATAAAGTGAACTGAGAATTTATC
Chlorocebus aethiops clone CH252-502M22, WORKING DRAFT SEQUENCE, 4 ordered pieces.
AC213183.2:79952-79969
TGTTTGGGGCAAGTTATCTAGGGTAGAAGT79952ACTGATTGGGACTCATGAAATTGTGATAAAGTGAACTGGGAATTTATC
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB090K20, complete sequence.
AC232533.1:59588-59605
GATGCCACCATCAGAAGTTGAAGAAGGGTT59588ACTGATTGGGACTCATGATTCGCCCACTAAAATTCTTATGGTGAGTAT
Brassica napus cultivar Xiang5A chromosome 4.
CP123879.1:69036498-69036515
GATGCCACCATCAGAAGTTGAAGAAGGGTT69036498ACTGATTGGGACTCATGATTCGCCGACTAAAATTCTTATGGTGAGTAT
Brassica napus genome assembly, chromosome: A09.
HG994363.1:52975916-52975933
GATGCCACCATCAGAAGTTGAAGAAGGGTT52975916ACTGATTGGGACTCATGATTCGCCGACTAAAATTCTTATGGTGAGTAT
Brassica napus genome assembly, chromosome: C08.
HG994372.1:41125771-41125788
GATGCCACCATCAGAAGTTGAAGAAGGGTT41125771ACTGATTGGGACTCATGATTCGCCAACTAAAATTCTTATGGTGAGTAT
Brassica rapa genome, scaffold: A09.
LR031568.1:57075294-57075311
GATGCCACCATCAGAAGTTGAAGAAGGGTT57075294ACTGATTGGGACTCATGATTCGCCCACTAAAATTCTTATGGTGAGTAT
Brassica oleracea HDEM genome, scaffold: C8.
LR031879.1:50370118-50370135
GATGCCACCATCAGAAGTTGAAGAAGGGTT50370118ACTGATTGGGACTCATGATTCGCCAACTAAAATTCTTATGGTGAGTAT
Brassica rapa genome assembly, chromosome: A09.
LS974625.2:67599327-67599344
GATGCCACCATCAGAAGTTGAAGAAGGGTT67599327ACTGATTGGGACTCATGATTCGCCCACTAAAATTCTTATGGTGAGTAT
Parietaria judaica genome assembly, chromosome: 7.
OX940866.1:3814043-3814060
ACGTTTGTGTTGCGTGCAAGCCACGCCTTC3814043ACTGATTGGGACTCATGAGGATGCATGCAACTGTAGCCATCATGATTA
Nostoc punctiforme PCC 73102 strain ATCC 29133 chromosome, complete genome.
CP001037.1:5399641-5399658
GCGGGCTGGTGTACCGATTATTCCAGTTGC5399641ACTGATTGGGACTCATGACCTCTATTTGGGAAAGGAGTTAACAATTCG
Mecyna flavalis genome assembly, chromosome: 21.
OX439414.1:1859536-1859553
TAAGCACCATAATAGTTGCAAGTTATCGAA1859536ACTGATTGGGACTCATGATTAAAGTCCGTTGTCCCACTACCTACTCAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/tcatgagtcccaatcagt
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : tcatgagtcccaatcagt | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.135 | 0.126 | search_plus_done; http://172.18.8.135:50400/match?q=TCATGAGTCCCAATCAGT&k=0&no_gap=0&offset=0&limit=50
0.367 | 0.232 | search_minus_done; http://172.18.8.135:50400/match?q=ACTGATTGGGACTCATGA&k=0&no_gap=0&offset=0&limit=31
0.396 | 0.029 | cgi_end;

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