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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-01-09 05:56:01, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sus scrofa scrofa breed NS chromosome 4.
CP071555.1:8204275-8204294
CAGCCAAGATGCTGTCTGCTGCCTGCTGGG8204275TGGAAGAACATGAGCATCAGGGGTGTTTTCCTTGAAGCCCTTTCAACACC
Sus scrofa genome assembly, chromosome: 4.
OY997211.1:8009160-8009179
CAGCCAAGATGCTGTCTGCTGCCTGCTGGG8009160TGGAAGAACATGAGCATCAGGGGTGTTTTCCTTGAAGCCCTTTCAACACC
Spirochaetia bacterium isolate 37a8ee1d-4d30-4a0d-bbf4-d03c19003557 genome assembly, chromosome: 1.
OY759746.1:193674-193693
CGGACGATCCTGAAGAACTCATTAATCTGA193674TGGAAGAACATGAGCATCAGTATATAGATAAATGGTCAAAATAACTGCAT
Spirochaetia bacterium isolate efeffb62-48c8-43b6-be4a-4368b18f5a81 genome assembly, chromosome: 1.
OY776146.1:772649-772668
CGGACGATCCTGAAGAACTCATTAATCTGA772649TGGAAGAACATGAGCATCAGTATATAGATAAATGGTCAAAATAACTGCAT
piTE010xM22.b1.ab1 PiTE - Interaction library between Potato tuber and Phytophthora infestans Phytophthora infestans cDNA, mRNA sequence.
ES456573.1:540-559
TGTTCCATCTGCAGCTGAAACATCTATTGC540TGGAAGAACATGAGCATCAGTTGATTTAGTGGCACCGTAACTTGGCTGGN
TSA: Capsicum annuum EJ_MegaContig_36743, mRNA sequence.
JW136260.1:868-887
TATTCCATCTGCATATGAAACATCCATTGC868TGGAAGAACATGAGCATCAGCTGATTTAGTGACACCACCATCTGGCTGGT
GP173 Solanum tuberosum genomic sequence library GP Solanum tuberosum genomic clone GP173, genomic survey sequence.
CG783104.1:23-42
CTGCAGCTGAAACATCCATTGC23TGGAAGAACATGAGCATCAGCTGATTTAGTGACACCAGAGCTTCGCCGGT
CHO_OF3380xi12r1.ab1 CHO_OF3 Nicotiana tabacum genomic 3', genomic survey sequence.
FH221760.1:92-111
CATTCCATCATCATAAGTTACATCCATAGC92TGGAAGAACATGAGCATCAGCTGATGTCGTAAAACCATCATCTATGCTAT
CHO_OF3392xn12r1.ab1 CHO_OF3 Nicotiana tabacum genomic 3', genomic survey sequence.
FH225171.1:651-670
CATTCCATCATCATAAGTTACATCCATAGC651TGGAAGAACATGAGCATCAGCTGATGTCGTAAAACCATCATCTATGCTAT
Pig DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH242-327C11.
CU179695.3:107989-108008
CAGCCAAGATGCTGTCTGCTGCCTGCTGGG107989TGGAAGAACATGAGCATCAGGGGTGTTTTCCTTGAAGCCCTTTCAACACC
Solanum lycopersicum genomic DNA, chromosome 8, clone: C08HBa0165B06.
AP009276.1:15381-15400
GCTTCCATCTGCAGCTGAAACAACCAATGC15381TGGAAGAACATGAGCATCAGCTGATTTAGTGACACCATATTGTGATGGGT
Solanum lycopersicum genomic DNA, chromosome 8, clone: C08HBa0165B06.
AP009276.1:20444-20463
GATTCCATCTGCAGCTGAAACCTCCAAAGC20444TGGAAGAACATGAGCATCAGCTGATTTTGTGACACCATCTTCTGGCAGGT
Solanum lycopersicum genomic DNA, chromosome 8, clone: C08HBa0165B06.
AP009276.1:27559-27578
TGTTCCATCTGCAGCTGAAACATCCATTGC27559TGGAAGAACATGAGCATCAGCTGATTTAGTGGCACCGTAACTTGGCTGGT
Solanum lycopersicum genomic DNA, chromosome 8, clone: C08HBa0165B06.
AP009276.1:31278-31297
GCTTCCATCTGCAGCTGAAACAACCAATGC31278TGGAAGAACATGAGCATCAGCTGATTTAGTGACACCATATTGTGATGGGT
Solanum lycopersicum genomic DNA, chromosome 8, clone: C08HBa0165B06.
AP009276.1:39125-39144
TAATCCATCTGCATCTGAAATATCCAATGC39125TGGAAGAACATGAGCATCAGCTGTTTTAGTGACACCATATTGTGATGTTT
Solanum lycopersicum genomic DNA, chromosome 8, clone: C08HBa0165B06.
AP009276.1:44233-44252
TGTTCCATCTGCAGCTGAAACAACCAATGC44233TGGAAGAACATGAGCATCAGCTGATTTAGTGACACCATATTGTGATGGGT
Solanum lycopersicum genomic DNA, chromosome 8, clone: C08HBa0165B06.
AP009276.1:58554-58573
TGTTCCGTCTGCAGCTGAAACAACCAATGC58554TGGAAGAACATGAGCATCAGCTGATTTAGTGACACCATATTGTGATGGGT
Solanum lycopersicum genomic DNA, chromosome 8, clone: C08HBa0165B06.
AP009276.1:64728-64747
TGTTCCATCTGCATCTGAAACATCCAATGC64728TGGAAGAACATGAGCATCAGCTGATTTAGTAACACCGTCATCTGGACTGT
Capsicum annuum Takanotsume DNA, chromosome 1, sequence.
AP026696.1:8822141-8822160
TAGTCCATCTGCAGCTGAAACATCCATTGC8822141TGGAAGAACATGAGCATCAGCTGATTTAGTGACACCATAACGTGAAGGGT
Solanum tuberosum cultivar P8 chromosome 8.
CP046686.1:53508719-53508738
TGTTCCATCTGCAGCTGAAACATCCATTGC53508719TGGAAGAACATGAGCATCAGCTGATTTAGTGACACCGTCATCTGGACTGT
Solanum tuberosum cultivar MSH/14-112 chromosome 8.
CP046701.1:53507397-53507416
TGTTCCATCTGCAGCTGAAACATCCATTGC53507397TGGAAGAACATGAGCATCAGCTGATTTAGTGACACCGTCATCTGGACTGT
Solanum pinnatisectum cultivar CGN17745 chromosome 8.
CP047564.1:53488512-53488531
TGTTCCATCTGCAGCTGAAACATCCATTGC53488512TGGAAGAACATGAGCATCAGCTGATTTAGTGACACCGTCATCTGGACTGT
Solanum tuberosum cultivar Solyntus chromosome 8.
CP055241.1:64451506-64451525
TGTTCCATCTGCATCTGAAACATCCAATGC64451506TGGAAGAACATGAGCATCAGCTGATTTAGTGACACCGGAGCTTGGCCGGT
Solanum tuberosum cultivar Solyntus chromosome 8.
CP055241.1:64454814-64454833
TGTTCCATCTGCAGCTGAAACAACCATTGC64454814TGGAAGAACATGAGCATCAGCTGATTTAGTGACACCGTCATCTGGACTGT
Solanum tuberosum cultivar Solyntus chromosome 8.
CP055241.1:64542986-64543005
TGTTCCATCTGCATCTGAAATATCCAATGC64542986TGGAAGAACATGAGCATCAGCTGATTTAGTGACACCGTAATATGGCCGGT
Solanum tuberosum cultivar Solyntus chromosome 8.
CP055241.1:64546293-64546312
CGTTCCATCTGCAGCTGAAACATCCATTGC64546293TGGAAGAACATGAGCATCAGCTGATTTAGTGACTCCGTCATCTGGACTGT
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 13.
CP124707.1:63223182-63223201
TGTTCCATCTGCAGCTGAAACATCCATTGC63223182TGGAAGAACATGAGCATCAGCTGATTTAGTGACACCGCCATCTGGCTGGT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 1.
CP124731.1:9145689-9145708
TAGTCCATCTGCAGCTGAAACATCCATTGC9145689TGGAAGAACATGAGCATCAGCTGATTTAGTGACACCATAACGTGAAGGGT
Solanum verrucosum cultivar 11H23 chromosome 8.
CP133619.1:51305292-51305311
TGTTCCATCTGCATCTGAAACATCCAATGC51305292TGGAAGAACATGAGCATCAGCTGATTTAGTGACACCGGAGCTTGGCCGGT
Solanum verrucosum cultivar 11H23 chromosome 8.
CP133619.1:51308588-51308607
CGTTCCATCTGCAGCTGAAACATCCATTGC51308588TGGAAGAACATGAGCATCAGCTGATTTAGTGACTCCGTCATCTGGACTGT
Lycium barbarum cultivar Ningqi No.1 chromosome 04.
CP145789.1:6527289-6527308
TTTTCCATCTGCAGCTGAAACATCCATTGC6527289TGGAAGAACATGAGCATCAGCTGATTTAGTGACACCGTAGAGTGGCTGGT
Lycium barbarum cultivar Ningqi No.1 chromosome 04.
CP145789.1:6553595-6553614
TTTTCCATCTGCAGCTGAAACATCCATTGC6553595TGGAAGAACATGAGCATCAGCTGATTTAGTGACACCGTCGAGTGGCTGGT
Lycium barbarum cultivar Ningqi No.1 chromosome 04.
CP145789.1:6608275-6608294
TTTTCCATCTGTAGCTGAAACCTCCATTGC6608275TGGAAGAACATGAGCATCAGCTGATTTAGTGACACCGTAGAGTTGCTGGT
Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
HG670306.1:711227670-711227689
TGTTAAATAAATAGAGACACTACAACTTAC711227670TGGAAGAACATGAGCATCAGAGCTCTTTTTAATTTAGAAAGCTTGCATAT
Solanum tuberosum cultivar Pampeana_INTA subtilisin-like serine protease gene, complete cds.
KP732538.1:925-944
TAATCCATCTGCAGCTGAAACATCCAATGC925TGGAAGAACATGAGCATCAGCTGATTTAGTGACACCGTAATATGGCCGGT
Quercus robur genome assembly, chromosome: 12.
OW028776.1:29201179-29201198
TAGTCCAGCAGCATTGCTGACGTGTGTTGC29201179TGGAAGAACATGAGCATCAGCTGAGGTACTGAAGCCATCACTTTCTTGAT
Solanum dulcamara genome assembly, chromosome: 5.
OX359256.1:76499611-76499630
TGTTCCATCTGCAGCTGAAACATCTATTGC76499611TGGAAGAACATGAGCATCAGCTGATTTAGTGACACCGTCATCTGGACTGT
Triticum aestivum genome assembly, chromosome: 3B.
OX421344.2:100106227-100106246
TGTTAAATAAATAGAGACACTACAACTTAC100106227TGGAAGAACATGAGCATCAGAGCTCTTTTTAATTTAGAAAGCTTGCATAT
Hordeum bulbosum genome assembly, chromosome: 2H_4.
OY737511.1:225145655-225145674
TTCCTCAGTAGAAACAACAGCTGAAGAAAA225145655TGGAAGAACATGAGCATCAGAAAGGTGGGAAGAAGCTTGAGCCGCATAGT
Hordeum bulbosum genome assembly, chromosome: 2H_2.
OY737526.1:207714800-207714819
TTCCTCAGCAGAAACAGCAGCTGAAGAAAA207714800TGGAAGAACATGAGCATCAGAAAGGTGGGAAGAAGCTTGAGCCGCATAGT
Hordeum bulbosum genome assembly, chromosome: 2H_2.
OY737648.1:207429972-207429991
TTCCTCAGCAGAAACAGCAGCTGAAGAAAA207429972TGGAAGAACATGAGCATCAGAAAGGTGGGAAGAAGCTTGAGCCGCATAGT
Hordeum bulbosum genome assembly, chromosome: 2H_2.
OY740927.1:207429972-207429991
TTCCTCAGCAGAAACAGCAGCTGAAGAAAA207429972TGGAAGAACATGAGCATCAGAAAGGTGGGAAGAAGCTTGAGCCGCATAGT
Hordeum bulbosum genome assembly, chromosome: 2H_4.
OY740970.1:225145655-225145674
TTCCTCAGTAGAAACAACAGCTGAAGAAAA225145655TGGAAGAACATGAGCATCAGAAAGGTGGGAAGAAGCTTGAGCCGCATAGT
Hordeum bulbosum genome assembly, chromosome: 2H_2.
OY741243.1:207714800-207714819
TTCCTCAGCAGAAACAGCAGCTGAAGAAAA207714800TGGAAGAACATGAGCATCAGAAAGGTGGGAAGAAGCTTGAGCCGCATAGT
Solanum nigrum genome assembly, chromosome: 5.
OZ176016.1:88391362-88391381
TAATCCATCTGCAGCTGTAACATTCAATGC88391362TGGAAGAACATGAGCATCAGCTGATTTAGTGACACCGTAACTTGGCTGGT
Solanum nigrum genome assembly, chromosome: 23.
OZ176034.1:4030758-4030777
TAATCCATCTACAGCTGAAACATCCAATGC4030758TGGAAGAACATGAGCATCAGCTGATTTAGTGACACCATAACTTGAAGGGT
Solanum nigrum genome assembly, chromosome: 23.
OZ176034.1:4036481-4036500
TAATCCATCTGCAGCTGTAACATCCAATGC4036481TGGAAGAACATGAGCATCAGCTGATTTAGTGACACCGTAAATTGGCTGGT
Solanum nigrum genome assembly, chromosome: 23.
OZ176034.1:4047458-4047477
TATTCCATCTGCAGCTGTAACATCCAATGC4047458TGGAAGAACATGAGCATCAGCTGATTTAGTGACACCGTAAATTGGCTGGT
Solanum nigrum genome assembly, chromosome: 27.
OZ176038.1:2525075-2525094
TGTTCCATCTGCAGCTGAAACATCCAATGC2525075TGGAAGAACATGAGCATCAGCTGATTTAGTCACACCGTTACTTGGCCGGT
Solanum nigrum genome assembly, chromosome: 30.
OZ176041.1:3045362-3045381
TAATCCATCTGCAGCTGTAACATCCAATGC3045362TGGAAGAACATGAGCATCAGCTGATTTAGTGACACCGTAACTTGGCTGGT
Cyperus fuscus genome assembly, chromosome: 15.
OZ210613.1:2196163-2196182
AGAACCGGCATTGTAGCTCACATGGGAGGC2196163TGGAAGAACATGAGCATCAGCAAAGGTGGTGTATCCTTCAGGTTTTGAGT
Geotrypetes seraphini genome assembly, chromosome: 7.
LR699152.1:78204769-78204788
AGTTCAATGAGGAGGCCTACAGGAGGAGGG78204769TGGAAGAACATGAGCATCAGAGGAAAGATGAAGATGGAATGGAGAACAGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/tggaagaacatgagcatcag
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : tggaagaacatgagcatcag | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.302 | 0.293 | search_plus_done; http://172.18.8.135:50800/match?q=TGGAAGAACATGAGCATCAG&k=0&no_gap=0&offset=0&limit=50
0.376 | 0.073 | search_minus_done; http://172.18.8.135:50800/match?q=CTGATGCTCATGTTCTTCCA&k=0&no_gap=0&offset=0&limit=0
0.376 | 0.000 | cgi_end;

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