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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-20 10:03:53, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

AC4100 NOLLY Medicago truncatula cDNA 5', mRNA sequence.
DY617895.1:259-280
GTGAGTATGAGGAACTTGCGAAGCTCCAAT259TTCAGTTCCATGAAAGCACAACTAGACTAGTAGATTTAAACAACTATAAGGC
AC4179 NOLLY Medicago truncatula cDNA 5', mRNA sequence.
DY617958.1:31-52
TGAGTATGAGGAACCTTGCGAAGCTCCAAT31TTCAGTTCCATGAAAGCACAACTAGACTAGTAGATTTAAACAACTATAAGGC
AC4503 NOLLY Medicago truncatula cDNA 5', mRNA sequence.
DY618211.1:580-601
GTGAGTATGAGGAACTTGCGAAGCTCCAAT580TTCAGTTCCATGAAAGCACAACTAGACTAGTAGATTTAAACAACTATAAGGC
METAL67TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence.
EY475925.1:635-656
GTAAGTATGAGGAACTTGCGAAGCTCCAAT635TTCAGTTCCATGAAAGCACAACTAAACTTATAGATTTGAACAACTATAAAGC
METBH33TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence.
EY478706.1:580-601
GTAAGTATGAGGAGCTTGCGAAGCTCCAAT580TTCAGTTCCATGAAAGCACAACTAGACTTGTAGATTTGAACAACTATAATGC
Medicago truncatula cDNA-AFLP fragment BT44M21_495 sequence.
DQ455543.1:144-165
GTAAGTATGAGGAACTTGCGAAGCTCCAAT144TTCAGTTCCATGAAAGCACAACTAGACTTGTAGATTTGAACAACTATAATGC
Medicago truncatula clone BAC MtQRRS1_F83005.5, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces.
JX457607.1:20197-20218
GCATTATAGTTGTTCAAATCTACAAGTCTA20197GTTGTGCTTTCATGGAACTGAAATTGGAGCTTCGCAAGTTCCTCATACTTAC
Medicago truncatula clone BAC MtQRRS1_F83005.5, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces.
JX457607.1:27281-27302
GCCTTATAGTTGTTCAAATCTACAAGTCTA27281GTTGTGCTTTCATGGAACTGAAATTGGAGCTTCGCAAGTTCCTCATACTTAC
Medicago truncatula clone mth2-21j3, complete sequence.
AC134049.24:81249-81270
GCATTATAGTTGTTCAAATCTACAAGTCTA81249GTTGTGCTTTCATGGAACTGAAATTGGAGCTTCGCAAGTTCCTCATACTTAC
Medicago truncatula clone mth2-21j3, complete sequence.
AC134049.24:88271-88292
GCTTTATAGTTGTTCAAATCTATAAGTTTA88271GTTGTGCTTTCATGGAACTGAAATTGGAGCTTCGCAAGTTCCTCATACTTAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ttcagttccatgaaagcacaac
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ttcagttccatgaaagcacaac | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.362 | 0.353 | search_plus_done; http://172.18.8.135:50400/match?q=TTCAGTTCCATGAAAGCACAAC&k=0&no_gap=0&offset=0&limit=50
0.409 | 0.048 | search_minus_done; http://172.18.8.135:50400/match?q=GTTGTGCTTTCATGGAACTGAA&k=0&no_gap=0&offset=0&limit=44
0.412 | 0.003 | cgi_end;

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