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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:23:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Micromys minutus genome assembly, chromosome: 30.
OZ004810.1:18525882-18525900
AGCCGAATGCAGTCATTCTCTAGATGTCAC18525882AAAAACTCCTCCCCCTCTTTCCCTCCCACACAGGTTGGTGGTAGCAATG
Somateria mollissima genome assembly, chromosome: 2.
OX598303.1:87072509-87072527
ATGGAAATCTGATAGTAATTTAGCAATCAG87072509AAAAACTCCTCCCCCTCTTTTTTTTTTTTAATGGTGAAGTTATTTTTTC
Somateria mollissima genome assembly, chromosome: 2.
OX598691.1:86925336-86925354
ATGGAAATCTGATAGTAATTTAGCAATCAG86925336AAAAACTCCTCCCCCTCTTTTTTTTTTTTAATGGTGAAGTTATTTTTTC
CLJ289-B01.x1d-t SHGC-CLJ2 Gasterosteus aculeatus cDNA clone CLJ289-B01 3', mRNA sequence.
DW615842.1:1084-1102
CCATGGGCCCTGGCTTTGCTGAAAATGTAA1084AAAAACTCCTCCCCCTCTTTTGGGCTTCTTGCAACCCGGAAAAAATGGC
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 5.
CP124727.1:236058345-236058363
GAAGCCTAGATCACTAGTTTGGAACTATCG236058345AAAAACTCCTCCCCCTCTTCTGCCCTCATCCCTGGATAATTCTAGAATA
Trifolium repens isolate ACLI19 chromosome 01_Occ.
CP125836.1:5304014-5304032
GAAGAATCTTCATTCCCAATAGTCCAATAA5304014AAAAACTCCTCCCCCTCTTAGTCTATTTCCATGGTGGTGGCTTTTGCAT
Trifolium repens isolate ACLI19 chromosome 01_Pall.
CP125837.1:5608973-5608991
GAAGAATCTTCATTCCTAATAGTCCCACAA5608973AAAAACTCCTCCCCCTCTTGGTCTATTTCCATGGTGGTGGCTTTTGCAT
Antiaris toxicaria isolate JCLG002 chromosome 10.
CP141162.1:13382788-13382806
AAAAGACGGATCTTCCCTGGTTCTTCTTCT13382788AAAAACTCCTCCCCCTCTTTTTTAGATATATATTTTTTTAAAGATTATT
Antiaris toxicaria isolate JCLG002 chromosome 10.
CP141175.1:13320535-13320553
AAAAGACGGATCTTCCCTGGTTCTTCTTCT13320535AAAAACTCCTCCCCCTCTTTTTTAGATATATATTTTTTTAAAGATTATT
UNVERIFIED: Banisteriopsis caapi isolate caupuri mitochondrion, complete genome.
OR574827.1:83994-84012
CTTCTTTCTGTCGAGCGGAGAATCTTAGCC83994AAAAACTCCTCCCCCTCTTATGAGGACATACAATGGGCCCAAATTAAAG
Vicia faba genome assembly, chromosome: 5.
OX451740.1:340433077-340433095
GAAATAATGTCTACCAAGTCTAATTAACAC340433077AAAAACTCCTCCCCCTCTTTAGCCATAAATAGGCCAAAGATACATGTAC
Trifolium fragiferum genome assembly, chromosome: 8.
OX940796.1:7402746-7402764
GAATCTTCATTCCCAATAATAGTCCCTCAA7402746AAAAACTCCTCCCCCTCTTAGTTTACTTCCATGGTGGTGGCTTTTGCAT
Macrobrachium nipponense isolate FS-2020 chromosome 40.
CP062055.1:45810669-45810687
ACTGACTTCTCTCGTTTTCCTCCCTTCAGG45810669AAAAACTCCTCCCCCTCTTCCACACAACATTTTCTTTGTCTCACCTGTG
Ichneumon xanthorius genome assembly, chromosome: 5.
OU824204.1:3932730-3932748
CGGGGAAAAAAAAAAATCATCGACATCGTT3932730AAAAACTCCTCCCCCTCTTATGACTTTTACCACGGGTAAATTAGAGCTA
Gari tellinella genome assembly, chromosome: 11.
OV277866.1:73599366-73599384
GGCCAGAATGAGTGAATTGAAAAATCTCGC73599366AAAAACTCCTCCCCCTCTTACTCCTCTGCTCAACATTGTTTTGTTGCTG
Cantharis flavilabris genome assembly, chromosome: 6.
OX424440.1:26053379-26053397
GTTTCTTGCAACATTTTCGAGATATTTCAC26053379AAAAACTCCTCCCCCTCTTCCCACTTAAACACGACGCTCTACAGCAGGA
Pyrrhosoma nymphula genome assembly, chromosome: 5.
OY754331.1:96192104-96192122
AGTCTCAATTCAATCATAAATAATAGCTTA96192104AAAAACTCCTCCCCCTCTTACTTTTTGTCTTGAAATTAAAGATGAATTA
Ceraclea dissimilis genome assembly, chromosome: 5.
OY756362.1:1640191-1640209
AAGATTAATCAAAGTCATGAACAAAACAAC1640191AAAAACTCCTCCCCCTCTTTGACGACGTCACTGACACACGTGTCGCCAT
Patella ulyssiponensis genome assembly, chromosome: 2.
OY783226.1:80851412-80851430
TAGAAATTCCACCTCATTTTCTCAATCTTC80851412AAAAACTCCTCCCCCTCTTCCACCAAGTAGAAATCGTAGTAGATCTCTT
Dioctria rufipes genome assembly, chromosome: 3.
OZ002742.1:192326866-192326884
TGTCCAGTGTCGCTTTACCTCTCAGAAGTA192326866AAAAACTCCTCCCCCTCTTGTTCTTTCTTCTCTAAACTAAAGGTCGTAG
Microdon myrmicae genome assembly, chromosome: 1.
OZ007496.1:208848939-208848957
CACGTCTCATCACATTTGACGATACGCTTC208848939AAAAACTCCTCCCCCTCTTGTCGAAATCGATTCATAAGTCTTCTACTGA
Hyperoodon ampullatus genome assembly, chromosome: 9.
OX457064.1:91188305-91188323
ATATTTATAATGTGTTGTGTATGTTTAAAA91188305AAGAGGGGGAGGAGTTTTTTTTTTACCATATTTAAATTTTTTTCAATAA
Delphinus delphis genome assembly, chromosome: 9.
OX465335.1:89541773-89541791
ATATTTATAATGTATTGTGTATGTTTAAAA89541773AAGAGGGGGAGGAGTTTTTTTAACCACATTTAAATTTTTTTCAATAATT
Balaenoptera acutorostrata genome assembly, chromosome: 12.
OX465362.1:74700040-74700058
GAGCCAGGATCTGTCCACTGTGATTGAAAT74700040AAGAGGGGGAGGAGTTTTTCATCTGTAGCATATCACAGGCATTCCTGGC
Stenella coeruleoalba genome assembly, chromosome: 9.
OX596394.1:87641266-87641284
ATATTTATAATGTATTGTGTATGTTTAAAA87641266AAGAGGGGGAGGAGTTTTTTTAACCACATTTAAATTTTTTTCAATAATT
Cottoperca gobio genome assembly, chromosome: 21.
LR131929.1:12161292-12161310
GAGAGAGAGAGAAAGAGAGAGAGAGAGAGA12161292AAGAGGGGGAGGAGTTTTTTACACCAGACATTTTGAAAAGTCATTGTAG
Geotrypetes seraphini genome assembly, chromosome: 1.
LR699146.1:50143998-50144016
AGTTCTTCTTAGACCCCAATATAAAGTCAA50143998AAGAGGGGGAGGAGTTTTTTTTAAAGGACTTATAACATCAAAAAGTAAG
Bufo bufo genome assembly, chromosome: 4.
LR991670.1:449258948-449258966
CAGTCTTTTTAGAAAGGATTGTAAACACTG449258948AAGAGGGGGAGGAGTTTTTCTTTATGTAAAGTCCTGTTATAATCTACTT
Vipera ursinii genome assembly, chromosome: Z.
OX365967.1:26591913-26591931
GAGTGTGAGGATCAGCAGGAGGAGGGGGGG26591913AAGAGGGGGAGGAGTTTTTCTTGTTTTAACCATAAGCCACCAGAAAGTA
Sequence 2166 from Patent WO0200928.
AX347095.1:2782-2800
TGGAATTAAATTTAATATTGTTGTATTTAT2782AAGAGGGGGAGGAGTTTTTTAGTTAGTTTTTTGTGTTGAAATTTATTTT
Sequence 374 from Patent WO0202807.
AX348916.1:2782-2800
TGGAATTAAATTTAATATTGTTGTATTTAT2782AAGAGGGGGAGGAGTTTTTTAGTTAGTTTTTTGTGTTGAAATTTATTTT
JP 2009538603-A/295: Modified Microbial Nucleic Acid.
FV536316.1:763744-763762
TTGGTTTTGAGATTGTTTTAATTAATTGAG763744AAGAGGGGGAGGAGTTTTTAGTAATTATTTTTTTGGTAGGAGTGTATGG
JP 2009538603-A/296: Modified Microbial Nucleic Acid.
FV536317.1:763744-763762
TTGGTTTTGAGATTGTTTTAATTAATTGAG763744AAGAGGGGGAGGAGTTTTTAGTAATTATTTTTTTGGTAGGAGTGTATGG
AY199776 Arabidopsis thaliana Landsberg DNA Arabidopsis thaliana genomic clone ET7029.Ds5.07.07.00.b.165, genomic survey sequence.
AY199776.1:120-138
TTTGTTGTAAGAAAAATGTTACAAAAAAAA120AAGAGGGGGAGGAGTTTTTTCATTAAAAAATTGGGGCCAAAGGGGG
UNVERIFIED: Banisteriopsis caapi isolate tucunaca mitochondrion, complete genome.
OR574828.1:162960-162978
CTTTAATTTGGGCCCATTGTATGTCCTCAT162960AAGAGGGGGAGGAGTTTTTGGCTAAGATTCTCCGCTCGACAGAAAGAAG
Hibiscus tridactylites genome assembly, chromosome: 8.
OY288272.1:89704458-89704476
TCCCGATGAGGCTAACCCTAACTGGTTGTG89704458AAGAGGGGGAGGAGTTTTTTTTCTTTTTCTGGGTTTAAGTTTAAATGGG
Hibiscus tridactylites genome assembly, chromosome: 13.
OY288277.1:76521086-76521104
TCCCGATGAGGCTAACCCTAACCGGTTGTG76521086AAGAGGGGGAGGAGTTTTTTTTTCTTTTTCTAGGTTTAAGTTTAAATGG
Hibiscus tridactylites genome assembly, chromosome: 13.
OY288277.1:76536016-76536034
TCCCGATGAGGCTAACCCTAACCGGTTGTG76536016AAGAGGGGGAGGAGTTTTTTTTCTTTTCTAGGTTTAAGTTTAAATGGGC
Hygrocybe coccinea genome assembly, chromosome: 9.
OY741996.1:2847214-2847232
GCACGGGGGTGGTCGATTGGTCGATTGAAA2847214AAGAGGGGGAGGAGTTTTTTTCTTTTATATATATACTGGGGCCTTTCCC
Persicaria maculosa genome assembly, chromosome: 12.
OY998262.1:61914851-61914869
CTGAATTTAAGAAAGCAAGAAATCCAGACA61914851AAGAGGGGGAGGAGTTTTTTGCATGGTTTTGAGTGGAGTTTTGGCGTTT
Anopheles coustani genome assembly, chromosome: 3.
OX030901.1:41963905-41963923
TCTCGTCGCCAAGCCGATTCGTTTTGGCTG41963905AAGAGGGGGAGGAGTTTTTTTTCTCATGGCTAAAGCTATGCGTCTTTCA
Anopheles ziemanni genome assembly, chromosome: 3.
OX030920.2:41963905-41963923
TCTCGTCGCCAAGCCGATTCGTTTTGGCTG41963905AAGAGGGGGAGGAGTTTTTTTTCTCATGGCTAAAGCTATGCGTCTTTCA
Patella depressa genome assembly, chromosome: 4.
OX419718.1:14831888-14831906
AAGAGATCGACTTCGATTTCGACTTGGTGG14831888AAGAGGGGGAGGAGTTTTTGAAGATTGAGAAAATGAGGTGGAATTCCTA
Orthosia gothica genome assembly, chromosome: 1.
OX459034.1:527257-527275
AAAAAGAGGTTTTATTTTAACTTCCATGGA527257AAGAGGGGGAGGAGTTTTTCGACGCCATATTTTAGTTTAGTATATTTTT
Orthosia gothica genome assembly, chromosome: 1.
OX459034.1:1003868-1003886
AAAAAGAGGTTTTATTTTAACTTCCATGGA1003868AAGAGGGGGAGGAGTTTTTCGACGCCATATTTTAGTTTAGTATATTTTT
Atherix ibis genome assembly, chromosome: 3.
OY282607.1:13358458-13358476
AGGGGTAAGCGTGGGAGGAATTGGAGGGGA13358458AAGAGGGGGAGGAGTTTTTAATTAAAGTAATTTGTAGTAACATTTGTAC
Exephanes ischioxanthus genome assembly, chromosome: 9.
OY294023.1:13168460-13168478
TAGCTCTAATTTACCCGCGGTAAAAGTCAT13168460AAGAGGGGGAGGAGTTTTTAACGATGTCAATGATTTTTTTTTCCCGAAG
Pyrrhosoma nymphula genome assembly, chromosome: 4.
OY754330.1:47111455-47111473
TATCAACTCTCCAACTCGGGGAGGGGGCGG47111455AAGAGGGGGAGGAGTTTTTAGAAACGTAAGGGTTGAGGAAGAAAAAAAA
Sturmia bella genome assembly, chromosome: 2.
OY759169.1:71224478-71224496
TTCAGGATTAAAACAATAATAATAAACATA71224478AAGAGGGGGAGGAGTTTTTAAAGATGATTTTGAATATATTTTATTAAAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAAAACTCCTCCCCCTCTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAAACTCCTCCCCCTCTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.422 | 0.413 | search_plus_done; http://172.18.8.135:50400/match?q=AAAAACTCCTCCCCCTCTT&k=0&no_gap=0&offset=0&limit=50
0.556 | 0.134 | search_minus_done; http://172.18.8.135:50400/match?q=AAGAGGGGGAGGAGTTTTT&k=0&no_gap=0&offset=0&limit=29
0.575 | 0.019 | cgi_end;

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