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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 16:25:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sciurus carolinensis genome assembly, chromosome: 7.
LR738596.1:117914086-117914105
TTTGGCTCCAGGTGAGCCGTTGCATCAGAG117914086AAAAAGCAGCAGATGGAGGAGGAAATACACTATTTATTTACAATTTGTTC
Canis lupus familiaris breed Labrador retriever chromosome 04a.
CP050572.1:39815756-39815775
GGTAAGCTAGTTGCCTGCAATTACACAGCT39815756AAAAAGCAGCAGATGGAGGATTTGAACTCAGACCTGTCTGACGTCACAAC
Canis lupus familiaris breed Labrador retriever chromosome 04b.
CP050625.1:39813217-39813236
GGTAAGCTAGTTGCCTGCAATTACACAGCT39813217AAAAAGCAGCAGATGGAGGATTTGAACTCAGACCTGTCTGACGTCACAAC
Canis lupus genome assembly, chromosome: 4.
HG994386.1:39865612-39865631
GGTAAGCTAGTTGCCTGCAATTACACAGCT39865612AAAAAGCAGCAGATGGAGGATTTGAACTCAGACCTGTCTGACGTCACAAC
Erinaceus europaeus genome assembly, chromosome: 3.
OX485812.1:166643724-166643743
GATAAGGTGGGTGGGGTTAAGGCAGGTTAT166643724AAAAAGCAGCAGATGGAGGACGCACCTCTTATTGTGAGAGAGAAATATTT
Solea senegalensis genome assembly, chromosome: Q.
OW185648.1:3830059-3830078
TTATTCGACACACACATGTGTGGAGACATG3830059AAAAAGCAGCAGATGGAGGAGAGGGGAAAGTGATTTGGGTTCATACGTGA
S014678w-024-030-A10-SP6 MPIZ-ADIS-024-leaf Beta vulgaris cDNA clone 024-030-A10 5-PRIME, mRNA sequence.
CF543072.1:98-117
ATAGGGCACGAGCAATCAAGTGGCACCAAA98AAAAAGCAGCAGATGGAGGAGTAAGAGGTGAATACCATTTAACAGCCAAA
S014678-024-030-A10-SP6 MPIZ-ADIS-024-leaf Beta vulgaris cDNA clone 024-030-A10 5-PRIME, mRNA sequence.
CF543085.1:98-117
ATAGGGCACGAGCAATCAAGTGGCACCAAA98AAAAAGCAGCAGATGGAGGAGTAAGAGGTGAATACCATTTAACAGCCAAA
Cryptococcus decagattii strain 7685027 chromosome 6.
CP143811.1:1154760-1154779
ATGCTCTACACGCACAACGTGGTCGGCTTC1154760AAAAAGCAGCAGATGGAGGAGGGCATCGCCAGTGGGAATGGAAGCATTGT
Sepia lycidas genome assembly, chromosome: 20.
OZ010590.1:70881523-70881542
GATGAAAAACAAGCCGATGGAGAAAATATT70881523AAAAAGCAGCAGATGGAGGAAGGATGAAAAAGAAATCGATGGAGGAATAA
Sylvilagus floridanus genome assembly, chromosome: 21.
OX463243.1:72678162-72678181
CCCACCTTGGTGAAATGTTTTCACAAGACC72678162TCCTCCATCTGCTGCTTTTTTCACAAATATCTTCTACAACTAGAGCTCAC
Epinephelus fuscoguttatus DNA, LG15, complete sequence.
AP022689.1:14294653-14294672
TAGTCTTGCTCACTTGCACACTCACTCGTC14294653TCCTCCATCTGCTGCTTTTTCTCAGCCTTTCACACACAAACTCCCCCCAC
Sparus aurata genome assembly, chromosome: 3.
LR537123.1:22370235-22370254
ACATAAACATCTCTCCCAGACAGAGTGATT22370235TCCTCCATCTGCTGCTTTTTTTACTGATAAAAAAAACAAAATTACAGAAA
Acanthopagrus latus isolate v.2019 genome assembly, chromosome: 3.
LR884462.1:19068295-19068314
ACATAAACATCTCTCCCAGACACAGTGATT19068295TCCTCCATCTGCTGCTTTTTTACCGATTAAAAAACAAAATTATATAAAAA
Podarcis lilfordi genome assembly, chromosome: 8.
OX395133.1:59906433-59906452
TCCAGCTGCTGATACACTTTGAGACGGTAC59906433TCCTCCATCTGCTGCTTTTTCTGCTTGGCGAGGTCATAGTCCTCCCGCTC
Zeus faber genome assembly, chromosome: 7.
OY482851.1:29687378-29687397
GAACACAATGAACGCAATGATGTAGTCAGC29687378TCCTCCATCTGCTGCTTTTTTTTTTAAGAGCCTACAGTATTTGATTTCTT
MAG: Fusobacterium varium isolate KR001_HAM_0062 chromosome, complete genome.
CP107203.1:138901-138920
TAGACCTAAATTATATTGAGCATCTTTAAG138901TCCTCCATCTGCTGCTTTTTTATAATATATTTCTGCTAAATCATATTTTT
S233P6401RC9.T0 LabradorRetriever Canis familiaris STS genomic, sequence tagged site.
BV221814.1:589-608
GTTGTGACGTCAGACAGGTCTGAGTTCAAA589TCCTCCATCTGCTGCTTTTTAGCTGTGTAATTGCAGGCAACTAGCTTACC
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 8.
OX392554.1:57803807-57803826
TTTGGCTGTTAAATGGTATTCACCTCTTAC57803807TCCTCCATCTGCTGCTTTTTTTTGGTGCCACTTGATTGCTCGTGCCCTAT
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 8.
OX392563.1:54489042-54489061
TTTGGCTGTTAAATGGTATTCACCTCTTAC54489042TCCTCCATCTGCTGCTTTTTTTTGGTGCCACTTGATTGCTCGTGCCCTAT
Eumerus sabulonum genome assembly, chromosome: 2.
OX645061.1:33015195-33015214
TGACCTTCCACACCAGAGAGTTTTTCCTCT33015195TCCTCCATCTGCTGCTTTTTTTTTTTGTTTGGCACACAGACTGACTATCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAAAAGCAGCAGATGGAGGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAAAGCAGCAGATGGAGGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.409 | 0.400 | search_plus_done; http://172.18.8.135:50400/match?q=AAAAAGCAGCAGATGGAGGA&k=0&no_gap=0&offset=0&limit=50
0.517 | 0.108 | search_minus_done; http://172.18.8.135:50400/match?q=TCCTCCATCTGCTGCTTTTT&k=0&no_gap=0&offset=0&limit=40
0.524 | 0.007 | cgi_end;

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