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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-17 12:32:35, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

BOHIF69TF BOHI Brassica oleracea genomic clone BOHIF69, genomic survey sequence.
BH505226.1:277-296
ATACTAATTGTTTTGACCTTTAGTACTAAC277AAAAAGGCACCGAAATGTGCTAACTGATGTTTAATTTTGTATTAAAATAG
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB077I08, *** SEQUENCING IN PROGRESS ***, 7 ordered pieces.
AC241067.1:69320-69339
ATACTAATTGTTTTGACCTTTAGTACTAAT69320AAAAAGGCACCGAAATGTGCTAACTGTTGTTTAATTTTGTATTAAAATAG
Brassica napus cultivar Xiang5A chromosome 3.
CP123878.1:27039831-27039850
ATACTAATTGTTTTGACCTTTAGTACTAAT27039831AAAAAGGCACCGAAATGTGCTAACTGTTGTTTAATTTTGTATTAAAATAG
Brassica napus cultivar Xiang5A chromosome 3.
CP151898.1:27039874-27039893
ATACTAATTGTTTTGACCTTTAGTACTAAT27039874AAAAAGGCACCGAAATGTGCTAACTGTTGTTTAATTTTGTATTAAAATAG
Brassica napus cultivar Xiang5A chromosome 17.
CP151912.1:56990732-56990751
ATACTAATTGTTTTGACCTTTAGTACTAAT56990732AAAAAGGCACCGAAATGTGCTAACTGTTGTTTAATTTTGTATTAAAATAG
Brassica napus genome assembly, chromosome: A03.
HG994357.1:27058760-27058779
ATACTAATTGTTTTGACCTTTAGTACTAAT27058760AAAAAGGCACCGAAATGTGCTAACCGTTGTTTAATTTTGTATTAAAATAG
Brassica napus genome assembly, chromosome: C07.
HG994371.1:50851673-50851692
ATACTAATTGTTTTGACCTTTAGTACTAAT50851673AAAAAGGCACCGAAATGTGCTAACTGTTGTTTAATTTTGTATTAAAATAG
Brassica rapa genome, scaffold: A03.
LR031572.1:26936152-26936171
ATACTAATTGTTTTGACCTTTAGTACTAAT26936152AAAAAGGCACCGAAATGTGCTAACCGTTGTTTAATTTTGTATTAAAATAG
Brassica rapa genome assembly, chromosome: A03.
LS974619.2:27063382-27063401
ATACTAATTGTTTTGACCTTTAGTACTAAT27063382AAAAAGGCACCGAAATGTGCTAACCGTTGTTTAATTTTGTATTAAAATAG
Hypnum cupressiforme genome assembly, chromosome: 8.
OZ220126.1:23055356-23055375
GAAGAAGCCAAAGACCTCAATAATTTGTTG23055356AAAAAGGCACCGAAATGTGCTTGTGCACAAATGATGAAGAAAAAAGGCAT
Blera fallax genome assembly, chromosome: 5.
OX337248.1:70517451-70517470
AACTTTTGAATTAGCTAATAGACCACCGCC70517451AAAAAGGCACCGAAATGTGCGAAGTGAGGACAATATCAGAGCTGCAGCGG
Anaspis maculata genome assembly, chromosome: X.
OX421968.1:52888522-52888541
TCAATTTTTTTCGACCCCAGATTTTTTTCG52888522AAAAAGGCACCGAAATGTGCTTTTTCAAAATTTTATATGCGGTTTCTTTC
Ribautiana ulmi genome assembly, chromosome: 1.
OZ207823.1:78096426-78096445
GAATACTATTTTTATCTGGCATGACTGGTG78096426AAAAAGGCACCGAAATGTGCTTTTAAATATAAAATGTTTGTAAAGTTTTA
Astatotilapia calliptera genome assembly, chromosome: 2.
LS420020.3:37352577-37352596
CTAGAATCCAAGGTGTGTGACATCTCAGGG37352577AAAAAGGCACCGAAATGTGCGCTGCTTTTCGGTCTGGTTACTACCGTTTA
Astatotilapia calliptera genome assembly, chromosome: 12.
LS420030.3:25937832-25937851
AGAATTCAAAGTGTATGACATCTCGGGGGA25937832AAAAAGGCACCGAAATGTGCGCTGCTTTTTGGTCTGGTTACTACCGTTTA
Astatotilapia calliptera genome assembly, chromosome: 16.
LS420034.2:12743596-12743615
AGAATCCAAAGTGTATGACATCTCAAATTA12743596AAAAAGGCACCGAAATGTGCGTTGCTTTTTGGTCTGGTTACTACCGTTTA
Neolamprologus multifasciatus genome assembly, chromosome: 3.
OY755017.2:5611957-5611976
CTAGAATCCAAAGTGTATCACATCTCAGGA5611957AAAAAGGCACCGAAATGTGCGCTGCTTTTCGATCTGGTTACCCATCCCTA
Rhamphochromis sp. 'chilingali' genome assembly, chromosome: 10.
OZ017724.1:27864275-27864294
AGAATTCAAAGTGTATGACATCTCGGGGGA27864275AAAAAGGCACCGAAATGTGCGCTGCTTTTTGGTCTGGTTACTACCGTTTA
Astatotilapia calliptera genome assembly, chromosome: 2.
OZ206493.1:38371027-38371046
CTAGAATCCAAGGTGTGTGACATCTCAGGG38371027AAAAAGGCACCGAAATGTGCGCTGCTTTTCGGTCTGGTTACTACCGTTTA
Astatotilapia calliptera genome assembly, chromosome: 3.
OZ206494.1:12484962-12484981
AGAATCTAAAGTGTATCAAAGCTCAGGAAA12484962AAAAAGGCACCGAAATGTGCGCTGCTTTTCGGTGTGGTTACTACCGTTTA
Astatotilapia calliptera genome assembly, chromosome: 12.
OZ206503.1:28269758-28269777
AGAATTCAAAGTGTATGACATCTCGGGGGA28269758AAAAAGGCACCGAAATGTGCGCTGCTTTTTGGTCTGGTTACTACCGTTTA
Astatotilapia calliptera genome assembly, chromosome: 16.
OZ206507.1:13713471-13713490
AGAATCCAAAGTGTATGACATCTCAAATTA13713471AAAAAGGCACCGAAATGTGCGTTGCTTTTTGGTCTGGTTACTACCGTTTA
Brassica napus cultivar Xiang5A chromosome 19.
CP123894.1:4816330-4816349
CTATTTTAATACAAAATTAAACAACAGTTA4816330GCACATTTCGGTGCCTTTTTATTAGTACTAAAGGTCAAAACAATTAGTAT
Brassica rapa beta-carotene hydroxylase gene, complete cds.
DQ156907.1:2570-2589
CTATTTTAATACAAAATTAAACAACAGTTA2570GCACATTTCGGTGCCTTTTTATTAGTACTAAAGGTCAAAACAATTAGTAT
Brassica napus beta-carotene hydroxylase (BCH) gene, complete cds.
HM212505.1:1069-1088
CTATTTTAATACAAAATTAAACAACAGTTA1069GCACATTTCGGTGCCTTTTTATTAGTACTAAAGGTCAAAACAATTAGTAT
Gillmeria ochrodactyla genome assembly, chromosome: 7.
OZ204477.1:21252692-21252711
CTTCGGCGCCGCGTGAAGCGGGAACATGTT21252692GCACATTTCGGTGCCTTTTTTCTGCACTCGTTTGATGAGTGCCCCAGTTC
Astatotilapia calliptera genome assembly, chromosome: 2.
LS420020.3:19285255-19285274
TAAACGGTAGTAACCAGACTGAAAAGCAGC19285255GCACATTTCGGTGCCTTTTTTTCCTGAGATGTCATACACTTTGGATTCTA
Neolamprologus multifasciatus genome assembly, chromosome: 7.
OY755016.2:3003189-3003208
TAAACGGTAGTAACCAGACCGAACAGCAGC3003189GCACATTTCGGTGCCTTTTTTTTCCTGAGCTGTGATACACTTTGGATTCT
Rhamphochromis sp. 'chilingali' genome assembly, chromosome: 13.
OZ017727.1:20274149-20274168
TAAACGGTAGTAACCAGACTGAAAAGCAGC20274149GCACATTTCGGTGCCTTTTTTTCCTGAGATGTCATACACTTTGGATTCTA
Rhamphochromis sp. 'chilingali' genome assembly, chromosome: 14.
OZ017728.1:23654091-23654110
TAAACGGTAGTAACCAGACCAAAAAGCAAC23654091GCACATTTCGGTGCCTTTTTTAATTTGAGATGTCATACACTTTGGATTCT
Astatotilapia calliptera genome assembly, chromosome: 2.
OZ206493.1:20204192-20204211
TAAACGGTAGTAACCAGACCGAAAAGCAGC20204192GCACATTTCGGTGCCTTTTTTTCCTGAGATGTCATACACTTTGGATTCTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAAAAGGCACCGAAATGTGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAAAGGCACCGAAATGTGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.281 | 0.272 | search_plus_done; http://172.18.8.135:50800/match?q=AAAAAGGCACCGAAATGTGC&k=0&no_gap=0&offset=0&limit=50
0.388 | 0.108 | search_minus_done; http://172.18.8.135:50800/match?q=GCACATTTCGGTGCCTTTTT&k=0&no_gap=0&offset=0&limit=28
0.394 | 0.006 | cgi_end;

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