GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-17 11:26:58, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus genomic DNA, chromosome 2, clone: LjT42N20, TM0665.
AP007500.2:73413-73437
AAGAGTCTTTCAAAAAAACGGATAAGAGTA73413AAAACATGTAGCTAAGAAACTAAAAAAAAGAAAAAAGAAAAAAACTAAAAAAGAG
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:79897763-79897787
AAGAGTCTTTCAAAAAAACGGATAAGAGTA79897763AAAACATGTAGCTAAGAAACTAAAAAAAAGAAAAAAGAAAAAAACTAAAAAAGAG
Lotus japonicus genomic DNA, chromosome 2, clone: LjT13I21, TM0076a.
AP004918.1:65081-65105
CTCTTTTTTAGTTTTTTTCTTTTTTCTTTT65081TTTTAGTTTCTTAGCTACATGTTTTTACTCTTATCCGTTTTTTTGAAAGACTCTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AAAACATGTAGCTAAGAAACTAAAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAACATGTAGCTAAGAAACTAAAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.093 | 0.084 | search_plus_done; http://172.18.8.135:50400/match?q=AAAACATGTAGCTAAGAAACTAAAA&k=0&no_gap=0&offset=0&limit=50
0.108 | 0.015 | search_minus_done; http://172.18.8.135:50400/match?q=TTTTAGTTTCTTAGCTACATGTTTT&k=0&no_gap=0&offset=0&limit=48
0.109 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).