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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-12 12:27:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Pelobates cultripes genome assembly, chromosome: 02.
OW240913.1:206969332-206969351
TTGTTTCCCGTATTGTTTTTACAGCAGTAC206969332AAAAGATGCTGCAAGCCATTAGTGAAATATCTAGACGAATATGTAGGTCA
Chroicocephalus ridibundus genome assembly, chromosome: Z.
OZ001737.1:16156691-16156710
CTGCGCATTCTCACTCCCAGAACGGAAAAG16156691AAAAGATGCTGCAAGCCATTAGCAACTTGGACCAATGCCAGGGGTCAAGC
Larus fuscus genome assembly, chromosome: Z.
OZ010757.1:16026910-16026929
CTGCGCATTCTCACTCCCAGAATGGAAAAG16026910AAAAGATGCTGCAAGCCATTAGCAACTTGGACCAATGCCAGGGGCCAAGC
Arachis hypogaea DNA, clone: AHGS48G07.
DH961692.1:41-60
CAATACTTTAAATCTGGAAGTATTTCGACC41AAAAGATGCTGCAAGCCATTTTAGATGGAAAACTCCTTGAATGAGTGAGA
Arachis hypogaea cultivar Shitouqi chromosome A06.
CP030988.1:25831735-25831754
ATGATCATCACATGTAGAACTATTTCGACC25831735AAAAGATGCTGCAAGCCATTTTAGATGGAAAACTCCTTGAATGAGTGAGA
Arachis hypogaea cultivar Shitouqi chromosome B06.
CP030998.1:39104659-39104678
ATGATTATCACATGTAGAACTGTTTTGACC39104659AAAAGATGCTGCAAGCCATTTTAGATGGAAAACTCCCTGAATGAGTGAGA
Arachis ipaensis cultivar K30076 chromosome 06.
CP049897.1:35686137-35686156
ATGATTATCACATGTAGAACTGTTTTGACC35686137AAAAGATGCTGCAAGCCATTTTAGATGGAAAACTCCCTGAATGAGTGAGA
Aeromonas salmonicida strain A527 chromosome, complete genome.
CP022550.1:1042524-1042543
TCGATATCCAGCCCGGCCCGTCCCAGTCAG1042524AAAAGATGCTGCAAGCCATTCGGGCCTCCAAGATGGATGCCTACCGCGAG
Calliphora vomitoria genome assembly, chromosome: 4.
OW818032.2:16089612-16089631
TTTCTCATCTTTCTGGCAACAAAAGATGCC16089612AAAAGATGCTGCAAGCCATTATCGGATACTCTGTTCCATAGTAAAGTGTA
Schistosoma bovis genome assembly, chromosome: Z.
OX104102.1:68378195-68378214
GTGTGCACCGAACTCACCTCAGTTGCATAT68378195AAAAGATGCTGCAAGCCATTATCACGTTTGTCGTGTGAAGAATGTTGTTC
Schistosoma spindale genome assembly, chromosome: 4.
OX336417.1:36300389-36300408
GTGTAGACCGGACTCACAACGGCTGCATAT36300389AAAAGATGCTGCAAGCCATTATCACGTTGGCTGAGCAAAGCATGTTGTTC
Tachina grossa genome assembly, chromosome: 4.
OX465277.1:18975704-18975723
ATGTTAAAGATTATTTAAAATTTTGTGCTT18975704AAAAGATGCTGCAAGCCATTTAATAGTAATACAGCATGAACATTTTCACA
Watersipora subatra genome assembly, chromosome: 7.
OY755164.1:41163051-41163070
GCAATGCGGGGCATTTTTATAGTACTTGGT41163051AAAAGATGCTGCAAGCCATTTCTGTCCTGTATCTGTTTTGGCTGCTAAAC
Peromyscus eremicus genome assembly, chromosome: 3.
OX460396.1:141584767-141584786
TGGGTATTTTGACATCTTGCTTCTCCTGCC141584767AATGGCTTGCAGCATCTTTTTCCTCTCCTTTCTCTTCCCACTATCTCTCT
Peromyscus eremicus genome assembly, chromosome: 3.
OX460468.1:142742365-142742384
TGGGTATTTTGACATCTTGCTTCTCCTGCC142742365AATGGCTTGCAGCATCTTTTTCCTATCCTTTCTCTTCCCACTATCTCTCT
Eptesicus nilssonii genome assembly, chromosome: 9.
OX621288.1:78463273-78463292
AATAAATAAATACCATTGAGAGCACATTCC78463273AATGGCTTGCAGCATCTTTTCTTCTGACAAGCAAGCCTGTGAAGCGAATA
Erpetoichthys calabaricus genome assembly, chromosome: 13.
LR536444.2:50445833-50445852
AGTTGATTTAATGGTCCTGATGTGACATCA50445833AATGGCTTGCAGCATCTTTTGTCTACCAACTAGTTGAGTTTGTTTTTTCT
Fringilla coelebs genome assembly, chromosome: 12.
OY740736.1:3142946-3142965
GGCCCTGGATTCCTGCATACAATTGCCCCC3142946AATGGCTTGCAGCATCTTTTTTATCCACTCCTTTGCCATGCTGTCCACCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAAAGATGCTGCAAGCCATT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAAGATGCTGCAAGCCATT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.155 | 0.147 | search_plus_done; http://172.18.8.135:50400/match?q=AAAAGATGCTGCAAGCCATT&k=0&no_gap=0&offset=0&limit=50
0.216 | 0.061 | search_minus_done; http://172.18.8.135:50400/match?q=AATGGCTTGCAGCATCTTTT&k=0&no_gap=0&offset=0&limit=37
0.220 | 0.004 | cgi_end;

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