GGGenome | Results

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2025-04-12 17:59:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Homo sapiens DNA, chromosome 2, nearly complete genome.
AP023462.1:166650899-166650918

TTTAGCCAAAATGATAACCCAGAAATTTTA166650899AAAAGGAAAAGACCTGTACTCTGATAGAGAGGAGACTCAGCTTTCTAGAC

Homo sapiens isolate CHM13 chromosome 2.
CP068276.2:170927538-170927557

TTTAGCCAAAATGATAACCCAGAAATTTTA170927538AAAAGGAAAAGACCTGTACTCTGATAGAGAGGAGACTCAGCTTTCTAGAC

Homo sapiens isolate NA24385 chromosome 2.
CP139519.1:170344668-170344687

TTTAGCCAAAATGATAACCCAGAAATTTTA170344668AAAAGGAAAAGACCTGTACTCTGATAGAGAGGAGACTCAGCTTTCTAGAC

Homo sapiens isolate NA24385 chromosome 2.
CP139542.1:170107945-170107964

TTTAGCCAAAATGATAACCCAGAAATTTTA170107945AAAAGGAAAAGACCTGTACTCTGATAGAGAGGAGACTCAGCTTTCTAGAC

Vespertilio murinus genome assembly, chromosome: 8.
OZ004712.1:37461391-37461410

TTGGGATCTTTGAAATCTTGGGAGGAAAAA37461391AAAAGGAAAAGACCTGTACTTTCAAAGCTTTCCTTCTTTGATGTATTGTA

Solea senegalensis genome assembly, chromosome: J.
OW185641.1:17906479-17906498

AGAAACAAGGATGGCACATACGAAAAAAAA17906479AAAAGGAAAAGACCTGTACTGATTGAACATGAAGCATCTCCCTGTGGCTC

JP 2010124828-A/151: NOVEL COMPOSITIONS AND METHODS FOR CANCER.
FW370412.1:474211-474230

TGTGGCTGGACTTTAGTGAAATTTGGGTTA474211AAAAGGAAAAGACCTGTACTCTCTTAGCTCTGCTTTTCTATTATTTGCTT

Sequence 226 from Patent EP2014669.
GN007785.1:474211-474230

TGTGGCTGGACTTTAGTGAAATTTGGGTTA474211AAAAGGAAAAGACCTGTACTCTCTTAGCTCTGCTTTTCTATTATTTGCTT

Sequence 226 from patent US 7892730.
GY017082.1:474211-474230

TGTGGCTGGACTTTAGTGAAATTTGGGTTA474211AAAAGGAAAAGACCTGTACTCTCTTAGCTCTGCTTTTCTATTATTTGCTT

JP 2010088432-A/14451: GENETIC POLYMORPHISMS FOR EXAMINING EFFECTIVENESS OR ADVERSE EFFECTS OF TREATMENT USING TNF INHIBITORS, AND USE THEREOF.
HV802443.1:272313-272332

TTTAGCCAAAATGATAACCCAGAAATTTTA272313AAAAGGAAAAGACCTGTACTCTGATAGAGAGGAGACTCAGCTTTCTAGAC

JP 2010088432-A/14788: GENETIC POLYMORPHISMS FOR EXAMINING EFFECTIVENESS OR ADVERSE EFFECTS OF TREATMENT USING TNF INHIBITORS, AND USE THEREOF.
HV802780.1:272313-272332

TTTAGCCAAAATGATAACCCAGAAATTTTA272313AAAAGGAAAAGACCTGTACTCTGATAGAGAGGAGACTCAGCTTTCTAGAC

Sequence 2557 from patent US 10724096.
MV449657.1:272314-272333

TTTAGCCAAAATGATAACCCAGAAATTTTA272314AAAAGGAAAAGACCTGTACTCTGATAGAGAGGAGACTCAGCTTTCTAGAC

Sequence 2558 from patent US 10724096.
MV449658.1:272314-272333

TTTAGCCAAAATGATAACCCAGAAATTTTA272314AAAAGGAAAAGACCTGTACTCTGATAGAGAGGAGACTCAGCTTTCTAGAC

Sequence 2559 from patent US 10724096.
MV449659.1:272314-272333

TTTAGCCAAAATGATAACCCAGAAATTTTA272314AAAAGGAAAAGACCTGTACTCTGATAGAGAGGAGACTCAGCTTTCTAGAC

Sequence 2560 from patent US 10724096.
MV449660.1:272314-272333

TTTAGCCAAAATGATAACCCAGAAATTTTA272314AAAAGGAAAAGACCTGTACTCTGATAGAGAGGAGACTCAGCTTTCTAGAC

Sequence 2561 from patent US 10724096.
MV449661.1:272314-272333

TTTAGCCAAAATGATAACCCAGAAATTTTA272314AAAAGGAAAAGACCTGTACTCTGATAGAGAGGAGACTCAGCTTTCTAGAC

Sequence 937 from patent US 11180807.
MY728758.1:272314-272333

TTTAGCCAAAATGATAACCCAGAAATTTTA272314AAAAGGAAAAGACCTGTACTCTGATAGAGAGGAGACTCAGCTTTCTAGAC

Sequence 938 from patent US 11180807.
MY728759.1:272314-272333

TTTAGCCAAAATGATAACCCAGAAATTTTA272314AAAAGGAAAAGACCTGTACTCTGATAGAGAGGAGACTCAGCTTTCTAGAC

Sequence 939 from patent US 11180807.
MY728760.1:272314-272333

TTTAGCCAAAATGATAACCCAGAAATTTTA272314AAAAGGAAAAGACCTGTACTCTGATAGAGAGGAGACTCAGCTTTCTAGAC

Sequence 940 from patent US 11180807.
MY728761.1:272314-272333

TTTAGCCAAAATGATAACCCAGAAATTTTA272314AAAAGGAAAAGACCTGTACTCTGATAGAGAGGAGACTCAGCTTTCTAGAC

Sequence 941 from patent US 11180807.
MY728762.1:272314-272333

TTTAGCCAAAATGATAACCCAGAAATTTTA272314AAAAGGAAAAGACCTGTACTCTGATAGAGAGGAGACTCAGCTTTCTAGAC

Sequence 2557 from patent US 11549145.
OS138457.1:272314-272333

TTTAGCCAAAATGATAACCCAGAAATTTTA272314AAAAGGAAAAGACCTGTACTCTGATAGAGAGGAGACTCAGCTTTCTAGAC

Sequence 2558 from patent US 11549145.
OS138458.1:272314-272333

TTTAGCCAAAATGATAACCCAGAAATTTTA272314AAAAGGAAAAGACCTGTACTCTGATAGAGAGGAGACTCAGCTTTCTAGAC

Sequence 2559 from patent US 11549145.
OS138459.1:272314-272333

TTTAGCCAAAATGATAACCCAGAAATTTTA272314AAAAGGAAAAGACCTGTACTCTGATAGAGAGGAGACTCAGCTTTCTAGAC

Sequence 2560 from patent US 11549145.
OS138460.1:272314-272333

TTTAGCCAAAATGATAACCCAGAAATTTTA272314AAAAGGAAAAGACCTGTACTCTGATAGAGAGGAGACTCAGCTTTCTAGAC

Sequence 2561 from patent US 11549145.
OS138461.1:272314-272333

TTTAGCCAAAATGATAACCCAGAAATTTTA272314AAAAGGAAAAGACCTGTACTCTGATAGAGAGGAGACTCAGCTTTCTAGAC

Eukaryotic synthetic construct chromosome 2.
CP034498.1:171296967-171296986

TTTAGCCAAAATGATAACCCAGAAATTTTA171296967AAAAGGAAAAGACCTGTACTCTGATAGAGAGGAGACTCAGCTTTCTAGAC

Eukaryotic synthetic construct chromosome 2.
CP034523.1:171296967-171296986

TTTAGCCAAAATGATAACCCAGAAATTTTA171296967AAAAGGAAAAGACCTGTACTCTGATAGAGAGGAGACTCAGCTTTCTAGAC

Homo sapiens cDNA clone UTERU2037903, 5' end, mRNA sequence.
DB274737.1:15-34

TGAAATTTGGGTTA15AAAAGGAAAAGACCTGTACTCTCTTAGCTCTGCTTTTCTATTATTTGCTT

WS00731.B21_A16 WS-PS-N-A-8 Picea glauca cDNA clone WS00731_A16 3, mRNA sequence.
DR572106.1:597-616

TACTCAATTTTTTGGAAAGAAGTTTAAGCG597AAAAGGAAAAGACCTGTACTCGGGGAATCAGAAGGATAGAAAGGAGGCCC

EST1084438 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PWAEB26 3' end, mRNA sequence.
DR694346.1:27-46

GGATTTTCTGGAAAGAAGCTTAAGCG27AAAAGGAAAAGACCTGTACTCGCGGAATCAGAAGGGTCGAGAGGAGGCCC

EST1153661 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMHI77 3' end, mRNA sequence.
DT638730.1:35-54

CGGGGGATTTTCTGGAAAGAAGCTTAAGCG35AAAAGGAAAAGACCTGTACTCGCGGAATCAGAAGGGTCGAGAGGAGGCCC

GQ0133.B3.r_I11 GQ013: Elongating ROOTS tips - saplings Picea glauca cDNA clone GQ0133_I11 5', mRNA sequence.
GE477332.1:680-699

TACTCAATTTTTTGGAAAGAAGTTTAAGCG680AAAAGGAAAAGACCTGTACTCGGGGAATCAGAAGGATAGAAAGGAGGCCC

PM1005L13TR BAC library from the prostate metastasis sample 25 Homo sapiens genomic clone PM1_005_L13, genomic survey sequence.
EI773013.1:80-99

TGTGGCTGGACTTTAGTGAAATTTGGGTTA80AAAAGGAAAAGACCTGTACTCTCTTAGCTCTGCTTTTCTATTATTTGCTT

Pinctada fucata DNA, chromosome 6, nearly complete sequence, Alternate Pseudohaplotype.
AP027121.1:17067644-17067663

GTTTAATTTTGTTTATCAACTATAGGATGA17067644AAAAGGAAAAGACCTGTACTTGGGCACATCATACAGTGGTATAATGGCCA

Elmis aenea genome assembly, chromosome: 7.
OX393582.1:34903533-34903552

TATAAGTGATATAAAAAAAAGAAAAATAGA34903533AAAAGGAAAAGACCTGTACTTAACATTATAGGCTTTCGATACTATGGACA

Homo sapiens BAC clone RP11-519L16 from 2, complete sequence.
AC012594.7:65699-65718

GTCTAGAAAGCTGAGTCTCCTCTCTATCAG65699AGTACAGGTCTTTTCCTTTTTAAAATTTCTGGGTTATCATTTTGGCTAAA

Homo sapiens chromosome 3 clone RP11-90H15, complete sequence.
AC097632.2:82556-82575

AAGCAAATAATAGAAAAGCAGAGCTAAGAG82556AGTACAGGTCTTTTCCTTTTTAACCCAAATTTCACTAAAGTCCAGCCACA

Homo sapiens DNA, chromosome 3, nearly complete genome.
AP023463.1:71170838-71170857

AAGCAAATAATAGAAAAGCAGAGCTAAGAG71170838AGTACAGGTCTTTTCCTTTTTAACCCAAATTTCACTAAAGTCCAGCCACA

Homo sapiens isolate CHM13 chromosome 3.
CP068275.2:71160117-71160136

AAGCAAATAATAGAAAAGCAGAGCTAAGAG71160117AGTACAGGTCTTTTCCTTTTTAACCCAAATTTCACTAAAGTCCAGCCACA

Homo sapiens isolate NA24385 chromosome 3.
CP139518.1:71081135-71081154

AAGCAAATAATAGAAAAGCAGAGCTAAGAG71081135AGTACAGGTCTTTTCCTTTTTAACCCAAATTTCACTAAAGTCCAGCCACA

Homo sapiens isolate NA24385 chromosome 3.
CP139541.1:71163476-71163495

AAGCAAATAATAGAAAAGCAGAGCTAAGAG71163476AGTACAGGTCTTTTCCTTTTTAACCCAAATTTCACTAAAGTCCAGCCACA

Eukaryotic synthetic construct chromosome 3.
CP034502.1:71112708-71112727

AAGCAAATAATAGAAAAGCAGAGCTAAGAG71112708AGTACAGGTCTTTTCCTTTTTAACCCAAATTTCACTAAAGTCCAGCCACA

Eukaryotic synthetic construct chromosome 3.
CP034527.1:71112708-71112727

AAGCAAATAATAGAAAAGCAGAGCTAAGAG71112708AGTACAGGTCTTTTCCTTTTTAACCCAAATTTCACTAAAGTCCAGCCACA

TSA: Hynobius retardatus mRNA, contig: comp5471457_c0_seq1.
LE459439.1:150-169

GTCTAGAAAGCTGAGTCTCCTCTCTATCAG150AGTACAGGTCTTTTCCTTTTTAAAATTTCTGGGTTATCATTTTGGCTAAA

Homo sapiens chromosome 3 clone RP11-398F9, WORKING DRAFT SEQUENCE, 15 unordered pieces.
AC069204.3:134826-134845

AAGCAAATAATAGAAAAGCAGAGCTAAGAG134826AGTACAGGTCTTTTCCTTTTTAACCCAAATTTCACTAAAGTCCAGCCACA

Homo sapiens chromosome 3 clone RP11-187D11, WORKING DRAFT SEQUENCE, 35 unordered pieces.
AC069425.7:177916-177935

AAGCAAATAATAGAAAAGCAGAGCTAAGAG177916AGTACAGGTCTTTTCCTTTTTAACCCAAATTTCACTAAAGTCCAGCCACA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

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Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AAAAGGAAAAGACCTGTACT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAAGGAAAAGACCTGTACT | format : html | download : | debug :

0.009 | 0.009 | search_start;
1.337 | 1.328 | search_plus_done; http://172.18.8.135:50400/match?q=AAAAGGAAAAGACCTGTACT&k=0&no_gap=0&offset=0&limit=50
1.426 | 0.089 | search_minus_done; http://172.18.8.135:50400/match?q=AGTACAGGTCTTTTCCTTTT&k=0&no_gap=0&offset=0&limit=14
1.434 | 0.008 | cgi_end;

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