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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-18 08:39:25, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Capsicum annuum Takanotsume DNA, chromosome 12, sequence.
AP026707.1:179530077-179530094
TACCCTGGTTGTTTTTTCCATATTTCAGAC179530077AAAAGGGATTGGTTCGTCCACTCTTTGGCCTTGACATTCTGGCCCTCT
Arachis hypogaea cultivar Shitouqi chromosome A10.
CP030992.1:107903949-107903966
TAGGCATTTTAAAATTCATTATTTCTTCGA107903949AAAAGGGATTGGTTCGTCGTCTTCCAGTTTTGGGGGGTGTTTCCCCTA
Arachis hypogaea cultivar Shitouqi chromosome B01.
CP030993.1:8131690-8131707
TAGGCATTTTGAAATTTATTATTTCTTCGG8131690AAAAGGGATTGGTTCGTCGTCTTCCAGTTTTGGGAGGTGTTTCCCCTG
Arachis ipaensis cultivar K30076 chromosome 01.
CP049892.1:8138474-8138491
TAGGCATTTTGAAATTTATTATTTCTTCGG8138474AAAAGGGATTGGTTCGTCGTCTTCCAGTTTTGGGAGGTGTTTCCCCTG
Aegilops speltoides subsp. speltoides genome assembly, chromosome: 5B.
OX082601.1:440528593-440528610
CCTCCATCCTGATTTTTTTCCTCCACTAAA440528593AAAAGGGATTGGTTCGTCCGACTTCTTTTCATATTTTCATGCTTGTTT
Agrostemma githago genome assembly, chromosome: 4.
OY288242.1:67462655-67462672
GGAGAAATTATCCAGGGTTTAGATAATCGC67462655AAAAGGGATTGGTTCGTCTAACCGGGAGCACCCGTTTACTGCAGGTAT
Dicrocoelium dendriticum genome assembly, chromosome: 4.
OX104066.1:23759560-23759577
CTTCCAAATCGTATGTTTCTCATAATGCAA23759560AAAAGGGATTGGTTCGTCTTTTTTACCTATTGGTCCCTTCGGTAGTAC
Lithophane socia genome assembly, chromosome: Z.
OX383251.1:9353389-9353406
AAGAAAAAAAAATGAAGTCGATTAATAATA9353389AAAAGGGATTGGTTCGTCTGTCCGTTTGCCTTCTCTCATCTTTTGCCA
Tiliacea aurago genome assembly, chromosome: 17.
OX402593.1:19662603-19662620
TAGGTAGGTACTTATTACAGTTCTTTGTAG19662603AAAAGGGATTGGTTCGTCAAACAGCTGCGGTGCGTTATTCCGGTTTGG
Ceriagrion tenellum genome assembly, chromosome: 2.
OY720633.1:33743698-33743715
GAGTTTTAGTGGGGAATCAAAATGGCACTC33743698AAAAGGGATTGGTTCGTCTTTTTTGGGAGATGAAAGGGGGGAGGATGT
Nicrophorus investigator genome assembly, chromosome: 6.
OY735145.1:14031673-14031690
TCGTGGATCGATTCTTCGATCTTTGGGACA14031673AAAAGGGATTGGTTCGTCTATCCAGGACTCGGCCTCGCTGCAGCGTTC
Pyrrhosoma nymphula genome assembly, chromosome: 5.
OY754331.1:154831442-154831459
ACTGGGAAAAATTTGACGGAGGGTGAAATA154831442AAAAGGGATTGGTTCGTCGAGGCGGAAGAGCGGCAGATGAGAAGGGAA
Mytilus edulis genome assembly, chromosome: 12.
OY782967.1:18651389-18651406
CCATATAATCAACGAAATGTTTTCCACCAA18651389AAAAGGGATTGGTTCGTCTATGTACTTCGCGTATCCTGTTTATCAGTA
Helleia helle genome assembly, chromosome: 3.
OY971416.1:8844392-8844409
GGCGCTGCGCCGGCGCACCTAGCCTTAAAC8844392AAAAGGGATTGGTTCGTCGTTGCGCGTCTCCATTGCACCAGTGTAGTG
Helleia helle genome assembly, chromosome: 3.
OY971416.1:8849040-8849057
GGCGCTGCGCCGGCGCACCTAGCCTTAAAC8849040AAAAGGGATTGGTTCGTCGTTGCGCGTCTCCATTGCACCAGTGTAGTG
Helleia helle genome assembly, chromosome: 3.
OY971416.1:8853229-8853246
GGCGCTGCGCCGGCGCACCTAGCCTTAAAC8853229AAAAGGGATTGGTTCGTCGTTGCGCGTCTCCATTGCACCAGTGTAGTG
Pyrausta despicata genome assembly, chromosome: 10.
OY992854.1:14693729-14693746
GTTTATTAACATAGGTAGTATGTATGTCTC14693729AAAAGGGATTGGTTCGTCGGCCCGCAAAATAATTAATGACAAGTGGAG
Aphidecta obliterata genome assembly, chromosome: 7.
OZ014433.1:22772729-22772746
GTTGGATTGTAATCAATTCATATTTTGATG22772729AAAAGGGATTGGTTCGTCAACAATTGGACAGTTTTGATGAATTCATTC
Arachis hypogaea cultivar Shitouqi chromosome A05.
CP030987.1:6095166-6095183
CAGGAAAAACACCCCCCAAAACAGGAAGAC6095166GACGAACCAATCCCTTTTCCGAAGAAATAATGAATTTCAAAATGCCTA
Arachis hypogaea cultivar Shitouqi chromosome B05.
CP030997.1:100491224-100491241
ACAGGGGAAAAACCCCCAAAACTGGAAGAC100491224GACGAACCAATCCCTTTTTCGAAGAAAAAATGAATTTTAAAATGCCTA
Arachis ipaensis cultivar K30076 chromosome 05.
CP049896.1:107788368-107788385
ACAGGGGAAAAACCCCCAAAACTGGAAGAC107788368GACGAACCAATCCCTTTTTCGAAGAAAAAATGAATTTTAAAATGCCTA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 12.
CP124720.1:82840648-82840665
AGAGGGCCAGAATGTCAAGGCCAAAGAGTG82840648GACGAACCAATCCCTTTTGTCTGAAATATGGAAAAAACAACCAGGGTA
Rhododendron vialii isolate Sample 1 chromosome 5b.
CP127056.1:16030502-16030519
GAGAGGCGTTCTCGGACTCCTCCGATCTCT16030502GACGAACCAATCCCTTTTGCTGAGGAAGCTTCCAGTTCCACATCCAAC
Cornus suecica genome assembly, chromosome: 1.
OY998238.1:80600846-80600863
TGGCAGCTACTTCTTATTATCCCCATCATC80600846GACGAACCAATCCCTTTTTCTTCTCCATTGTTTCGTGCTAGAGAGAGC
Oceanobacillus iheyensis strain CHQ24 chromosome, complete genome.
CP020357.1:1631674-1631691
GGGTTCCATGTCAGGTGGTGCACAGAAGAA1631674GACGAACCAATCCCTTTTCTCCCGGGAACAAGATTTACAAGAAATGAC
Protodeltote pygarga genome assembly, chromosome: 16.
OW388264.2:12298557-12298574
CTTATCCATGTGATTTTATTAAGATTTGAG12298557GACGAACCAATCCCTTTTTGCTGATAAGTCTAAATAAAGAATATTTAT
Lithophane ornitopus genome assembly, chromosome: Z.
OX419614.1:12068049-12068066
TGGCAAAAGATGAGAGAAGGCAAACGGACA12068049GACGAACCAATCCCTTTTTATTAATCGACTTCACTTTTTTTCTTTGTT
Acholoe squamosa genome assembly, chromosome: 10.
OX439044.1:56768166-56768183
CAACGTTATTTTAATGGAGTGGGTACCAGC56768166GACGAACCAATCCCTTTTTATATATAGGGTAATAACAGTTCATTAATG
Helleia helle genome assembly, chromosome: 9.
OY971423.1:16806441-16806458
CACTACACTGGTGCAATGGAGACGCGCAAC16806441GACGAACCAATCCCTTTTGTTTAAAGCTAGGTGCGCCGGCGCAGCGCC
Helleia helle genome assembly, chromosome: 9.
OY971423.1:16811089-16811106
CACTACACTGGTGCAATGGAGACGCGCAAC16811089GACGAACCAATCCCTTTTGTTTAAAGCTAGGTGCGCCGGCGCAGCGCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AAAAGGGATTGGTTCGTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAAGGGATTGGTTCGTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.093 | 0.084 | search_plus_done; http://172.18.8.135:50400/match?q=AAAAGGGATTGGTTCGTC&k=0&no_gap=0&offset=0&limit=50
0.126 | 0.033 | search_minus_done; http://172.18.8.135:50400/match?q=GACGAACCAATCCCTTTT&k=0&no_gap=0&offset=0&limit=32
0.134 | 0.008 | cgi_end;

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