GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-14 21:37:02, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sciurus vulgaris genome assembly, chromosome: 8.
LR738618.1:81067385-81067407
TGAACCTTGAAAAGACTGTGCTTAAGTGAA81067385AAAAGTCAGTTACCCACACCAAAAAAATTACATTATATGATTCCATTTATGTG
sv29f10.y1 Gm-c1057 Glycine soja cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1057-1051 5', mRNA sequence.
BG041077.1:137-159
AAGATCACATGATTCTAAAACACTACTACT137AAAAGTCAGTTACCCACACCAAACTTTTTCTATGAAATAAAAGCACAACATGG
GM880006A10B10 Gm-r1088 Glycine max cDNA clone Gm-r1088-1987 3', mRNA sequence.
BU544983.1:31-53
AAGATCACATGATTCTAAAACACTACTACT31AAAAGTCAGTTACCCACACCAAACTTTTTCTATGAAATAAAAGCACAACATGG
Glycine max cultivar Williams 82 chromosome 18.
CP126443.1:2549135-2549157
AAGATCACATGATTCTAAAACACTACTACT2549135AAAAGTCAGTTACCCACACCAAACTTTTTCTATGAAATAAAAGCACAACATGG
abe80c09.y1 Soybean methylation filtered genomic library Glycine max genomic, genomic survey sequence.
CL872132.1:70-92
CCATGTTGTGCTTTTATTTCATAGAAAAAG70TTTGGTGTGGGTAACTGACTTTTAGTAGTAGTGTTTTAGAATCATGTGATCTT
Glycine max cultivar Williams 82 chromosome 11.
CP126436.1:39323393-39323415
CCCTGTTGTGCTTTTATTTCATAGAAAAAG39323393TTTGGTGTGGGTAACTGACTTTTAGTATTAGTGTTTTAGAATCATGTGATCTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AAAAGTCAGTTACCCACACCAAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAAGTCAGTTACCCACACCAAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.129 | 0.120 | search_plus_done; http://172.18.8.135:50400/match?q=AAAAGTCAGTTACCCACACCAAA&k=0&no_gap=0&offset=0&limit=50
0.158 | 0.029 | search_minus_done; http://172.18.8.135:50400/match?q=TTTGGTGTGGGTAACTGACTTTT&k=0&no_gap=0&offset=0&limit=46
0.160 | 0.002 | cgi_end;

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