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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:49:11, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Microcaecilia unicolor genome assembly, chromosome: 2.
LR594633.1:615600346-615600365
GATGTTGCTCCAAAGTCAACCACGCTGCCA615600346AAAATAAAGGAGGTGGTAATTTTTTTTCCCTCCAGTCGTGCAGTTTTAGT
Wolffia australiana isolate 7733 chromosome 16.
CP092615.1:3284538-3284557
GTAAACAAAATGATTCTTAAAGTCATTGAG3284538AAAATAAAGGAGGTGGTAATGGAAAATTCTGAGATGATATCACAATAATA
Acinetobacter baumannii BJAB0715, complete genome.
CP003847.1:1084117-1084136
CTCAAAACGATCAGTTAATTAACGCAAGAG1084117AAAATAAAGGAGGTGGTAATTTAGCAGTAGCTTTAAATGAGTCTGCATTA
Acinetobacter baumannii strain XH858 chromosome, complete genome.
CP014528.1:1115612-1115631
CTCAAAACGATCAGTTAATTAACGCAAGAG1115612AAAATAAAGGAGGTGGTAATTTAGCAGTAGCTTTAAATGAGTCTGCATTA
Acinetobacter baumannii strain 10324 chromosome, complete genome.
CP023022.1:3224407-3224426
CTCAAAACGATCAGTTAATTAACGCAAGAG3224407AAAATAAAGGAGGTGGTAATTTAGCAGTAGCTTTAAATGAGTCTGCATTA
Acinetobacter baumannii strain AB053 chromosome.
CP037869.1:74336-74355
CTCAAAACGATCAGTTAATTAACGCAAGAG74336AAAATAAAGGAGGTGGTAATTTAGCAGTAGCTTTAAATGAGTCTGCATTA
Acinetobacter baumannii strain XH1056 chromosome, complete genome.
CP045645.1:1075528-1075547
CTCAAAACGATCAGTTAATTAACGCAAGAG1075528AAAATAAAGGAGGTGGTAATTTAGCAGTAGCTTTAAATGAGTCTGCATTA
Acinetobacter baumannii strain SNUBHAB0006 chromosome, complete genome.
CP137075.1:1927210-1927229
CTCAAAACGATCAGTTAATTAACGCAAGAG1927210AAAATAAAGGAGGTGGTAATTTAGCAGTAGCTTTAAATGAGTCTGCATTA
Acinetobacter baumannii strain PUMA0247 chromosome, complete genome.
CP144907.1:911560-911579
CTCAAAACGATCAGTTAATTAACGCAAGAG911560AAAATAAAGGAGGTGGTAATTTAGCAGTAGCTTTAAATGAGTCTGCATTA
Xestia xanthographa genome assembly, chromosome: 1.
LR990642.1:10566261-10566280
TCTCAGGTCGATGAGTAAGCATGAATTAGA10566261AAAATAAAGGAGGTGGTAATTAAAGCTGAATATTGACACATTTGATTAAA
Metellina segmentata genome assembly, chromosome: 3.
OX375875.1:77255210-77255229
TTCTAATCAGTCAATTATTTATACAATACA77255210AAAATAAAGGAGGTGGTAATAGAAATGTCAGTGATTCCATTTTCTTAGGG
Synanthedon tipuliformis genome assembly, chromosome: 16.
OX392423.1:9001083-9001102
AGAGAAACGCCGCGAGAAAAGCCGCGCGCA9001083AAAATAAAGGAGGTGGTAATTTTTAATGTTTTTTTTTTTTAGTATACTTT
Odontocerum albicorne genome assembly, chromosome: 18.
OX463856.1:10156261-10156280
ATAAATGCTATAGCAATGCATATACTGAAA10156261AAAATAAAGGAGGTGGTAATGTATTATAGAATAAGGAATAATGTGATTAG
Pseudoips prasinana genome assembly, chromosome: 20.
OX621254.1:28162454-28162473
TAAGAGGGAGGGACTAATAACGCTAAAAAA28162454AAAATAAAGGAGGTGGTAATGCAGGACGTGGACTTTTCTGTTTGAGATTT
Cepaea hortensis genome assembly, chromosome: 16.
OY992891.1:59008035-59008054
GTCTAAAATGGATTTCATGACATGCTCTAG59008035AAAATAAAGGAGGTGGTAATATTGACAACATCAGTGCTGATTAATGTATA
Onchidella celtica genome assembly, chromosome: 2.
OZ007568.1:10639526-10639545
TACAAATTGTCGAAAATCTTCACCTTTGGC10639526AAAATAAAGGAGGTGGTAATGGTTAATAATTTACAGATTATAAAGGAGGA
Chroicocephalus ridibundus genome assembly, chromosome: Z.
OZ001737.1:81290509-81290528
GTGCAGCACACCCAAATAAGAATTGTGTGA81290509ATTACCACCTCCTTTATTTTCATCTTGGATTGCCTGCCTATGAAGTTCAT
Larus fuscus genome assembly, chromosome: Z.
OZ010757.1:80479150-80479169
GTGCAGCACACCCAAATAAGAATTGTGTGA80479150ATTACCACCTCCTTTATTTTCATCTTGGATTGCCTGCCTATGAAGTTCAT
Viscum album genome assembly, chromosome: 10_4.
OY728166.1:513713694-513713713
TATAATTTAGTCCTGTATCCACAAGAGAAT513713694ATTACCACCTCCTTTATTTTCAAAAAAGATGAAAAATAATAAAATAAAAA
Acinetobacter baumannii strain WKA02 chromosome, complete genome.
CP020598.1:1493653-1493672
TAATGCAGACTCATTTAAAGCTACTGCTAA1493653ATTACCACCTCCTTTATTTTCTCTTGCGTTAATTAACTGATCGTTTTGAG
Acinetobacter baumannii strain AB048 chromosome.
CP037870.1:365680-365699
TAATGCAGACTCATTTAAAGCTACTGCTAA365680ATTACCACCTCCTTTATTTTCTCTTGCGTTAATTAACTGATCGTTTTGAG
Acinetobacter baumannii strain AB179-VUB chromosome, complete genome.
CP091360.1:3075205-3075224
TAATGCAGACTCATTTAAAGCTACTGCTAA3075205ATTACCACCTCCTTTATTTTCTCTTGCGTTAATTAACTGATCGTTTTGAG
Pecten maximus genome assembly, chromosome: 7.
LR736844.1:33251451-33251470
TGTTCATCAATCCAGACTGATTCGTCTGGA33251451ATTACCACCTCCTTTATTTTACAAGACTGCAAATCAAGTAAATGATAATC
Brassicogethes aeneus genome assembly, chromosome: 8.
OV121139.1:11038564-11038583
TCACATCTTCTTGGTGAACATAGATTCCAT11038564ATTACCACCTCCTTTATTTTAGTCCAAACTGCATCCTAAATTATCTAAAT
Sepiola atlantica genome assembly, chromosome: 28.
OY744542.1:72646938-72646957
GAGAACAGTCAGAGAAAACACCAGAGAGAC72646938ATTACCACCTCCTTTATTTTAGGGGGAGTGTAGTATAGTATCTGTTCTGT
Azorinus chamasolen genome assembly, chromosome: 1.
OY755235.1:114672808-114672827
AAAGAAGGGATCCGACTTCAAAAGATCCAA114672808ATTACCACCTCCTTTATTTTAAACCCTTCGCACTGCAAGATTTTGATCTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAAATAAAGGAGGTGGTAAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAATAAAGGAGGTGGTAAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.357 | 0.348 | search_plus_done; http://172.18.8.135:50400/match?q=AAAATAAAGGAGGTGGTAAT&k=0&no_gap=0&offset=0&limit=50
0.496 | 0.139 | search_minus_done; http://172.18.8.135:50400/match?q=ATTACCACCTCCTTTATTTT&k=0&no_gap=0&offset=0&limit=34
0.503 | 0.007 | cgi_end;

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