GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 12:59:56, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Pinctada fucata DNA, chromosome 12, nearly complete sequence, Alternate Pseudohaplotype.
AP027127.1:39559600-39559619
TTTGATGACGTTTTATAACATTTATTGGGA39559600AAAATAATTCCCTCTCTGCCCTGTAAATGAAATTTTGTTACTCTAGTCCC
Philonthus spinipes genome assembly, chromosome: 12.
OY720311.1:20262815-20262834
AAACATTCCGCGCCCCGTATCCACCCTTAA20262815AAAATAATTCCCTCTCTGCCTCGTCTTCGGCATAAATGTCGATTTTTGTT
Philonthus spinipes genome assembly, chromosome: 12.
OY720311.1:20263317-20263336
AAACATTCCGCGCCCCGTATCCACCCTTAA20263317AAAATAATTCCCTCTCTGCCCCGTCTTCGGCATAAATGTCTATTTTTGTT
Apodemus sylvaticus genome assembly, chromosome: 5.
OX359301.1:106777037-106777056
CACTATTTAACATGAAGTATGTTCCACATG106777037GGCAGAGAGGGAATTATTTTATTATTTCTGCATGAGGTGCATTTTCATCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AAAATAATTCCCTCTCTGCC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAATAATTCCCTCTCTGCC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.094 | 0.086 | search_plus_done; http://172.18.8.135:50400/match?q=AAAATAATTCCCTCTCTGCC&k=0&no_gap=0&offset=0&limit=50
0.111 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=GGCAGAGAGGGAATTATTTT&k=0&no_gap=0&offset=0&limit=47
0.111 | 0.001 | cgi_end;

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