GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-17 05:17:18, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Cucumis melo genomic scaffold, anchoredscaffold00011.
LN681841.1:2383777-2383800
TTCGAAAAAAAAACTGAAAAAAAAGGAAAT2383777AAAATATGAAACCCATGGACATGACGTAGCCCTGTGTTTGTCAGGTTGACCATT
Cucumis melo isolate PI 511890 chromosome 4.
CP136104.1:34069645-34069668
AATGGTCAACCTGACAAACACAGGGCTACG34069645TCATGTCCATGGGTTTCATATTTTATTTCCTTTTTTTTCAGTTTTTTTTTTCGA
Cucumis melo genomic chromosome, chr_4.
LN713258.1:30739431-30739454
AATGGTCAACCTGACAAACACAGGGCTACG30739431TCATGTCCATGGGTTTCATATTTTATTTCCTTTTTTTTCAGTTTTTTTTTCGAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AAAATATGAAACCCATGGACATGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAATATGAAACCCATGGACATGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.099 | 0.090 | search_plus_done; http://172.18.8.135:50400/match?q=AAAATATGAAACCCATGGACATGA&k=0&no_gap=0&offset=0&limit=50
0.124 | 0.025 | search_minus_done; http://172.18.8.135:50400/match?q=TCATGTCCATGGGTTTCATATTTT&k=0&no_gap=0&offset=0&limit=49
0.125 | 0.001 | cgi_end;

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