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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:10:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Rana temporaria genome assembly, chromosome: 5.
LR991684.1:6323014-6323033
GTTGAGTTCATGCAAAGAAGACTGAGACAG6323014AAAATCGGGACAACCACCTAGACGCAACAGGTTTTGCCAAGCATCACCTT
Gymnoscopelus microlampas genome assembly, chromosome: 21.
OY732723.1:40123520-40123539
TTTACACACTAACTTTACAAAGATGTACAG40123520AAAATCGGGACAACCACCTACGCCAGGTGCCAGTAGTTTATGGCCGCTCT
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH006P24, complete sequence.
AC189558.2:67296-67315
TATATAATTTTCATAAATATTTATACCCGC67296AAAATCGGGACAACCACCTAGTATATATATATATATATATATATCAAATA
Gymnoscopelus braueri genome assembly, chromosome: 22.
OY725529.1:5126492-5126511
CCATAAACTACTGGCACCTGATGTACACTG5126492TAGGTGGTTGTCCCGATTTTCTGTACATCTTTGTAAAGTTTGTGTGTGTG
Brassica rapa subsp. pekinensis clone KBrH125B21, complete sequence.
FP340387.1:30222-30241
TATTTGATATATATATATATATATATATAC30222TAGGTGGTTGTCCCGATTTTGCGGGTATAAATATTTATGAAAATTATATA
Brassica rapa genome, scaffold: A06.
LR031569.1:8381184-8381203
AAATTATTTGATATATATATATATATATAC8381184TAGGTGGTTGTCCCGATTTTGCGGGTATAAATATTTATGAAAATTATATA
Brassica rapa genome assembly, chromosome: A06.
LS974622.2:9218086-9218105
AAATTATTTGATATATATATATATATATAC9218086TAGGTGGTTGTCCCGATTTTGCGGGTATAAATATTTATGAAAATTATATA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAAATCGGGACAACCACCTA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAATCGGGACAACCACCTA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.217 | 0.208 | search_plus_done; http://172.18.8.135:50400/match?q=AAAATCGGGACAACCACCTA&k=0&no_gap=0&offset=0&limit=50
0.312 | 0.095 | search_minus_done; http://172.18.8.135:50400/match?q=TAGGTGGTTGTCCCGATTTT&k=0&no_gap=0&offset=0&limit=47
0.315 | 0.003 | cgi_end;

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