GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 06:18:04, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Nesoenas mayeri genome assembly, chromosome: 32.
OY720089.1:336619-336638
GGGGTGAAAATTGGGCCTAAAATGGGGCAG336619AAAATGGGAAACAATTGAGCTCAAAATGGAGTGAAATTTGGGGCCAAAAA
Lotus japonicus genomic DNA, chromosome 1, clone: LjT45A19, TM0386.
AP009963.1:49444-49463
GAAGAGTGAGAGTCCACTGAATTGAAGCTC49444AAAATGGGAAACAATTGAGCTCGTAATATGTAAGAAAATACATTATGTGC
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:95536522-95536541
GAAGAGTGAGAGTCCACTGAATTGAAGCTC95536522AAAATGGGAAACAATTGAGCTCGTAATATGTAAGAAAATACATTATGTGC
Ligustrum vulgare genome assembly, chromosome: 11.
OY743178.1:28533921-28533940
TGAAAAATAAAGATCATCCTTTCAATCAAA28533921AAAATGGGAAACAATTGAGCCAATAACCATTAACAATTTACATGCATAAA
Anopheles coustani genome assembly, chromosome: 3.
OX030901.1:48195175-48195194
CCACGTAAAAAACGCGCGTTTTCTAGCATG48195175AAAATGGGAAACAATTGAGCCAAGTGTAGGGGGGAAAAGTTGAAGCGAAA
Anopheles ziemanni genome assembly, chromosome: 3.
OX030920.2:48195175-48195194
CCACGTAAAAAACGCGCGTTTTCTAGCATG48195175AAAATGGGAAACAATTGAGCCAAGTGTAGGGGGGAAAAGTTGAAGCGAAA
Amaurobius ferox genome assembly, chromosome: 4.
OX578137.1:28931399-28931418
GCGGGTGCTGTTCTTTAATATATGGATTAG28931399AAAATGGGAAACAATTGAGCCATAAAAAAATGCAATTTTGAACAATATGT
Chionomys nivalis genome assembly, chromosome: 2.
OX465450.1:132731089-132731108
TTGAGGATGAGTTTTATTGTTTCCCACTCA132731089GCTCAATTGTTTCCCATTTTGTTTTTATATGAGAGTATCATTTGAGAGTC
Lotus japonicus genomic DNA, clone: LjT20L14, TM1040.
AP010150.1:78555-78574
GCACATAATGTATTTTCTTACATATTACGA78555GCTCAATTGTTTCCCATTTTGAGCTTCAATTCAGTGGACTCTCACTCTTC
Eristalinus aeneus genome assembly, chromosome: 1.
OY019130.1:128371253-128371272
GTGTTTTCTTTGCTCATACCTTTCTCTAAA128371253GCTCAATTGTTTCCCATTTTGCCTATAAAAAAATTAATTTCAAAATAACC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AAAATGGGAAACAATTGAGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAATGGGAAACAATTGAGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.115 | 0.106 | search_plus_done; http://172.18.8.135:50400/match?q=AAAATGGGAAACAATTGAGC&k=0&no_gap=0&offset=0&limit=50
0.145 | 0.030 | search_minus_done; http://172.18.8.135:50400/match?q=GCTCAATTGTTTCCCATTTT&k=0&no_gap=0&offset=0&limit=43
0.147 | 0.002 | cgi_end;

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