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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-05 20:47:33, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Plecotus auritus genome assembly, chromosome: 4.
OY734025.1:62244721-62244740
CAACTCTTGGGATTCTGAGACCAGTGTGTG62244721AAAATGTGAATGAGGCTGAGATAGCCTTTTAGAGAGACCACATGGAAAAC
Gouania willdenowi genome assembly, chromosome: 6.
LR132000.1:3540763-3540782
ATTGATGCTCTCGTGTGAACGCTGAGCAGG3540763AAAATGTGAATGAGGCTGAGACGGGTGTCGGGTTACACCCAGCAGGCCCA
Meconema thalassinum genome assembly, chromosome: X.
OX336389.2:1208941353-1208941372
AGATTGAAAGCAATGTCCAAAAGAATGATA1208941353AAAATGTGAATGAGGCTGAGAAAAAAGATACGAGCCCTACAGTAGTCGCA
Drosophila subobscura genome assembly, chromosome: A.
OY757194.1:4489901-4489920
TGTTCAATATTACCAAGAGACAAAGATCGC4489901AAAATGTGAATGAGGCTGAGGCTGAGGCTGTGGCTGAGGCTCAAACTGCG
Drosophila subobscura genome assembly, chromosome: A.
OY757498.1:4054797-4054816
TGTTCAATATTACCAAGAGACAAAGATCGC4054797AAAATGTGAATGAGGCTGAGGCTGAGGCTGTGGCTGTGGCTGAGGCTCAA
Acomys russatus genome assembly, chromosome: 14.
LR877225.1:20107161-20107180
TCTTGTATGAATTAGCCCAGTCCTGTTGAA20107161CTCAGCCTCATTCACATTTTCAAGGCATAGACAATGTAAGGCTAGTTTTT
Acomys percivali genome assembly, chromosome: 8.
OU015749.1:84523354-84523373
TTTATGATAACTTAGCCCAGTACTGTTGAA84523354CTCAGCCTCATTCACATTTTTGTGGCACAGACAATGTGAGGCTAGTTTTT
Lotus japonicus genomic DNA, chromosome 1, clone: LjB07M21, BM1485.
AP008108.2:7051-7070
AACCTTGTTATCAATCATATCATTATCATC7051CTCAGCCTCATTCACATTTTATTCAACATGTCCAGTTTCAGGTCCAATCA
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:97982330-97982349
ATAGTAAACATCATTCGTATCATTATCATC97982330CTCAGCCTCATTCACATTTTATTCAACATGTCCAGTTTCAGGTCCAATCA
Hedera helix genome assembly, chromosome: 4.
OX359267.1:53108637-53108656
AAGGTCGCTTTCATCTGGTTGACTAAAGTT53108637CTCAGCCTCATTCACATTTTTCTCTTTATCGAAACTATGACCATTTCCAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAAATGTGAATGAGGCTGAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAATGTGAATGAGGCTGAG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.337 | 0.328 | search_plus_done; http://172.18.8.135:50400/match?q=AAAATGTGAATGAGGCTGAG&k=0&no_gap=0&offset=0&limit=50
0.421 | 0.083 | search_minus_done; http://172.18.8.135:50400/match?q=CTCAGCCTCATTCACATTTT&k=0&no_gap=0&offset=0&limit=45
0.424 | 0.003 | cgi_end;

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