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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-03-20 06:31:08, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

MBEKC94TFB mth2 Medicago truncatula genomic clone 72P19, genomic survey sequence.
CG976323.1:654-682
TCATTTCGCAAGTTCCATATGTTGTTGTTC654AAAATTGAAGTCCACTCTGTTATGTCTACCTTTGAACGTAGAAGTCCTCCTAGTGTTTT
mth2-181M2RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula.
CR503588.1:459-487
TCATTTCGTAAGTTCCATACGTCGTTGTTC459AAAATTGAAGTCCACTCTGTTATGTCTACCTTTTGAACGTAGAACTCCTCCTAGTGTTT
mth4-23E3FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula, genomic survey sequence.
CR970071.1:657-685
TCATTGCGCAAGTTCCATATGTTGCTGTTC657AAAATTGAAGTCCACTCTGTTATGTCTACCTTTGAACGTAAAAG
Medicago truncatula clone mth2-6g9, complete sequence.
AC142396.25:69666-69694
TCATTTGATAAGTTCCATATGTCGCTGTTC69666AAAATTGAAGTCCACTCTGTTATGTCTACCTTTGAACGTAGAAGTCCTCCAAGTGTTTT
M.truncatula DNA sequence from clone MTH2-59K24 on chromosome 3.
CT962507.6:32962-32990
TCATTTGATAAGTTCCATACGTTGCTGTTC32962AAAATTGAAGTCCACTCTGTTATGTCTACCTTTGAACGTAGAAGTCCTCCTATTGTTTT
M.truncatula DNA sequence from clone MTH2-154K9 on chromosome 3.
CT963130.10:86977-87005
TCATTTCGCAAGTTCCATATGTTGCTGTTC86977AAAATTGAAGTCCACTCTGTTATGTCTACCTTTGAACGGAGAAGTCCTCCTAGTGTTTT
NF007H08ST1F1000 Developing stem Medicago truncatula cDNA clone NF007H08ST 5', mRNA sequence.
AW688464.2:620-648
AAAACATTAGGAGGACTTCTACGTTCAAAG620GTAGACATAACAGAGTGGACTTCAATTTTGAACAGCAACATATGGAACTTGCGCAATGA
NF079E02ST1F1017 Developing stem Medicago truncatula cDNA clone NF079E02ST 5', mRNA sequence.
AW694719.2:100-128
AAAACACTAGGAGGACTTCTCCGTTCAAAG100GTAGACATAACAGAGTGGACTTCAATTTTTTCAATTTTGAACAGCAGCATATGGAACTT
NF085H01ST1F1013 Developing stem Medicago truncatula cDNA clone NF085H01ST 5', mRNA sequence.
BE326035.1:547-575
AAAACACTAGGAGGACTTCTACGTTCAAAG547GTAGACATAACAGAGTGGACTTCAATTTTGAACAACAACATATGGAACTTGCGAAATGA
T221267b Resistance gene analogs from Medicago truncatula (non TIR-NBS-LRR) Medicago truncatula genomic clone 08D_Mt25, genomic survey sequence.
AZ773519.1:571-599
AAAACAATAGGAGGACTTCTACGTTCAAAG571GTAGACATAACAGAGTGGACTTCAATTTTGAACAGCAACGTATGGAACTTATCAAATGA
M.truncatula DNA sequence *** SEQUENCING CANCELLED *** from clone MTH2-72P19.
CU062623.4:64276-64304
AAAACACTAGGAGGACTTCTACGTTCAAAG64276GTAGACATAACAGAGTGGACTTCAATTTTGAACAACAACATATGGAACTTGCGAAATGA
Medicago truncatula clone mth2-15e6, complete sequence.
AC145027.17:64023-64051
AAAACACTAGGAGGACTTCTACGTTCAAAG64023GTAGACATAACAGAGTGGACTTCAATTTTGAACAACAACATATGGAACTTGCGAAATGA
M.truncatula DNA sequence from clone MTH2-59B18 on chromosome 3.
CT030245.8:105179-105207
AAAACATTAGGAGGACTTCTACGTTCAAAG105179GTAGACATAACAGAGTGGACTTCAATTTTGAACAGCAACATATGGAACTTGCGCAATGA
M.truncatula DNA sequence from clone MTH2-46O20 on chromosome 3.
CT990605.5:108071-108099
AAAACACTTGGAGGACTTCTACGTTCAAAG108071GTAGACATAACAGAGTGGACTTCAATTTTGAACAGCGACATATGGAACTTATCAAATGA
M.truncatula DNA sequence from clone MTH2-40P6 on chromosome 3.
CU041230.16:15881-15909
AAAACACTAGGAGGACTTCTACGTTCAAAG15881GTAGACATAACAGAGTGGACTTCAATTTTGAACAACAACATATGGAACTTGCGAAATGA
M.truncatula DNA sequence from clone MTH2-40P6 on chromosome 3.
CU041230.16:115241-115269
AAAACACTAGGAGGACTTCTACGTTCAAAG115241GTAGACATAACAGAGTGGACTTCAATTTTGAACAACAACATATGGAACTTGCGAAATGA
M.truncatula DNA sequence from clone MTH2-35I16 on chromosome 3.
CU468255.5:52462-52490
AAAACACTTGGAGGGCTTCTACGTTCAAAG52462GTAGACATAACAGAGTGGACTTCAATTTTGAACAGCGACATATGGAACTTATCAAATGA
M.truncatula DNA sequence from clone MTE1-71J17 on chromosome 3.
CU659667.5:43581-43609
AAAACACTAGGAGGACTTCTACGTTCAAAG43581GTAGACATAACAGAGTGGACTTCAATTTTGAACAACAACATATGGAACTTGCGAAATGA
M.truncatula DNA sequence from clone MTE1-77G23 on chromosome 3.
CU896663.2:12780-12808
AAAACACTAGGAGGACTTCTACGTTCAAAG12780GTAGACATAACAGAGTGGACTTCAATTTTGAACAACAACATATGGAACTTGCGAAATGA
Medicago arabica genome assembly, chromosome: 4.
OX326967.1:9373353-9373381
AAAACACTAGGAGGACTTCTACGTTCAAAG9373353GTAGACATAACAGAGTGGACTTCAATTTTGAACAGCAACATATGGAACTTGCGCAATGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAAATTGAAGTCCACTCTGTTATGTCTAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAATTGAAGTCCACTCTGTTATGTCTAC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.401 | 0.392 | search_plus_done; http://172.18.8.135:50400/match?q=AAAATTGAAGTCCACTCTGTTATGTCTAC&k=0&no_gap=0&offset=0&limit=50
0.540 | 0.139 | search_minus_done; http://172.18.8.135:50400/match?q=GTAGACATAACAGAGTGGACTTCAATTTT&k=0&no_gap=0&offset=0&limit=44
0.549 | 0.009 | cgi_end;

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