GGGenome Help | Japanese

Database:

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-18 05:13:27, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Mdfw2040e02.y1 Mdfw Malus domestica cDNA clone Mdfw2040e02 5' similar to TR:Q9ZS31 Q9ZS31 NL27, mRNA sequence.
CN581701.1:8-28
AGGAACC8AAACAAAGAGTTTGGGCAAGGCACTTGCTCACCATGAAAGCAAACTCAAAG
Glycine max cultivar Williams 82 chromosome 1.
CP126426.1:48331539-48331559
AAAAACTTCCCAAGACAAATATCTTCTCCA48331539AAACAAAGAGTTTGGGCAAGGTTATAACTATACATGAGAATTTGGAGAGAA
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143372.1:54789190-54789210
ACAAGGTGGATCCATCGGATGTGAGGAACC54789190AAACAAAGAGTTTGGGCAAGGCACTTGCTCACCATGAAAGCAAACTCAAAG
Malus sylvestris genome assembly, chromosome: 15.
OU696517.1:52586166-52586186
ACAAGGTGGATCCATCGGATGTGAGGAACC52586166AAACAAAGAGTTTGGGCAAGGCACTTGCTCACCATGAAAGCAAACTCAAAG
Malus domestica genome assembly, chromosome: 15.
OU696691.1:54281271-54281291
ACAAGGTGGATCCATCGGATGTGAGGAACC54281271AAACAAAGAGTTTGGGCAAGGCACTTGCTCACCATGAAAGCAAACTCAAAG
Malus domestica genome assembly, chromosome: 15.
OU744556.1:54015324-54015344
ACAAGGTGGATCCATCGGATGTGAGGAACC54015324AAACAAAGAGTTTGGGCAAGGCACTTGCTCACCATGAAAGCAAACTCAAAG
Malus domestica genome assembly, chromosome: 15.
OU744967.1:54601692-54601712
ACAAGGTGGATCCATCGGATGTGAGGAACC54601692AAACAAAGAGTTTGGGCAAGGCACTTGCTCACCATGAAAGCAAACTCAAAG
Malus domestica genome assembly, chromosome: 15.
OU745005.1:53628786-53628806
ACAAGGTGGATCCATCGGATGTGAGGAACC53628786AAACAAAGAGTTTGGGCAAGGCACTTGCTCACCATGAAAGCAAACTCAAAG
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141941.1:2202897-2202917
CTTTGAGTTTGCTTTCATGGTGAGCAAGTG2202897CCTTGCCCAAACTCTTTGTTTGGTTCCTCACATCCGATGGATCCACCTTGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AAACAAAGAGTTTGGGCAAGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AAACAAAGAGTTTGGGCAAGG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.129 | 0.120 | search_plus_done; http://172.18.8.135:50400/match?q=AAACAAAGAGTTTGGGCAAGG&k=0&no_gap=0&offset=0&limit=50
0.150 | 0.021 | search_minus_done; http://172.18.8.135:50400/match?q=CCTTGCCCAAACTCTTTGTTT&k=0&no_gap=0&offset=0&limit=42
0.151 | 0.001 | cgi_end;

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