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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:23:45, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

QM0AAC3BF05FM1 CCH3 Citrus clementina genomic clone CCH3029K10, genomic survey sequence.
ET082280.1:475-493
ATAAGCAATATTAAGCCATGGTGATGAAAG475AAACAATCTTACAAGCCACCAACCCAATGTTGATAGTTTGGAACACTCA
Citrus reshni microsatellite DNA, locus mCrCIR04F12.
FR692369.1:324-342
ATAAGCAATATTAAGCCATGGTGATGAAAG324AAACAATCTTACAAGCCACCAACCCAATGTTGATAGTTTGGAACACTCA
Citrus sinensis genome assembly, chromosome: 1.
OY754318.1:13675409-13675427
ATAAGCAATATTAAGCCATGGTGATGAAAG13675409AAACAATCTTACAAGCCACCAACCCAATGTTGATAGTTTGGAACACTCA
Cruciata laevipes genome assembly, chromosome: 9.
OY787640.1:718330-718348
CATCCTTCTGTGTGGCGCCATTCTAATGTT718330AAACAATCTTACAAGCCACTATAACTCAGCTAATCTGTGTCACTTGTAA
Phallusia mammillata mRNA for vasculin (Gpbp1 gene).
LR785549.1:847-865
ATGTGTCAGTGAAAAATCAAAGCAGAGGAA847AAACAATCTTACAAGCCACAAAAAATAATCTTCAACGTGAAATAGAATT
Eulithis prunata genome assembly, chromosome: 22.
OU974028.1:2738023-2738041
CTGATAAACAAACCACTGATAATAAAAAGA2738023AAACAATCTTACAAGCCACTGATAATGGTAAAACAACAATTGGATCAAC
Eulithis prunata genome assembly, chromosome: 22.
OU974028.1:2738395-2738413
ATTCAAAGGATGTCACTGATAATAAAAAGA2738395AAACAATCTTACAAGCCACTGATAATGATCAAACAACAACTGTTGACAC
Eulithis prunata genome assembly, chromosome: 22.
OU974028.1:2739610-2739628
CTGATAAACAAACCACTGATAATAAAAAGA2739610AAACAATCTTACAAGCCACTGATAATGGTAAAACAACAATTGGATCAAC
Eulithis prunata genome assembly, chromosome: 22.
OU974028.1:2739859-2739877
CTGATAAACAAACCACTGATAATAATAAGA2739859AAACAATCTTACAAGCCACTGATAATGATCAAACAACAACTGTCGACAC
Eulithis prunata genome assembly, chromosome: 22.
OU974028.1:2743552-2743570
CTGATAAACAAACCACTGATAATAAAAAGA2743552AAACAATCTTACAAGCCACTGATAATGATCAAACAACAACTGTCGACAC
Eulithis prunata genome assembly, chromosome: 22.
OU974028.1:2745346-2745364
CTGATAAACAAACCACTGATAATAAAAAGA2745346AAACAATCTTACAAGCCACTGATAATGGTAAAACAACAATTGGATCAAC
Eulithis prunata genome assembly, chromosome: 22.
OU974028.1:2745595-2745613
CTGATAAACAAACCACTGATAATAAAAAGA2745595AAACAATCTTACAAGCCACTGATAATGATCAAACAACAACTGTCGACAC
Pelobates cultripes genome assembly, chromosome: 09.
OW240920.1:51066177-51066195
GGGGGAGTTGATGACTTGTGTTTCTGCCTT51066177GTGGCTTGTAAGATTGTTTTGGTAAAGTACTATTGTATTACTGTTTGCC
Rhingia campestris genome assembly, chromosome: 4.
OW052185.1:117803534-117803552
GGTAATGTATTATGGTTATAAATGTTCACA117803534GTGGCTTGTAAGATTGTTTTCAATTGGGCGATCACAGGCTGGGACATTT
Melanostoma scalare genome assembly, chromosome: 3.
OX456986.1:4161550-4161568
ATTTGATATCACTTCGCTTGTCTACTGATT4161550GTGGCTTGTAAGATTGTTTTCTTCGGCTGCTTATGACAATGGGATGGAA
Stratiomys singularior genome assembly, chromosome: 3.
OX940879.1:110706917-110706935
CTTAAACGAAACTAAAGTAATTTTTGAAAT110706917GTGGCTTGTAAGATTGTTTTTATTTCGTGAGGCTTCTGTTCGACATTCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAACAATCTTACAAGCCAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAACAATCTTACAAGCCAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.310 | 0.302 | search_plus_done; http://172.18.8.135:50400/match?q=AAACAATCTTACAAGCCAC&k=0&no_gap=0&offset=0&limit=50
0.416 | 0.105 | search_minus_done; http://172.18.8.135:50400/match?q=GTGGCTTGTAAGATTGTTT&k=0&no_gap=0&offset=0&limit=38
0.418 | 0.003 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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