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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:47:58, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Citrus reshni microsatellite DNA, locus mCrCIR02G12.
FR677575.1:113-131
ACGAAACTGAAAAGGGAAATAATTAAAAAA113AAACCGAAATACAAGAGTGGATATAATAATCATATTTATTTGGAAAACT
Mimas tiliae genome assembly, chromosome: 11.
HG995249.1:8769799-8769817
ACAGTAATTTAACTGGCTACAATGCCCTTT8769799AAACCGAAATACAAGAGTGTTTACACACTGTTGTGGCAGAAATAGACAA
Mimas tiliae genome assembly, chromosome: 23.
HG995261.1:6608343-6608361
CCAGTAATTTTATTAGCTTCAATATCCTTC6608343AAACCGAAATACAAGAGTGCTTATACACTAGTATTTAATGGCAGAAATA
Mimas tiliae genome assembly, chromosome: 24.
HG995262.1:11378292-11378310
CCAGTCATTTCACTGGCTTAAATGTCATCC11378292AAACCGAAATACAAGAGTGCTTACACACTGCTTAATTCAACGGTTATTA
Melanargia galathea genome assembly, chromosome: 13.
OV049868.1:2411631-2411649
AACGTGAGGCGTTGTGCAAAGAATGGTCCA2411631AAACCGAAATACAAGAGTGTTATAGTGTCACTGACTACATACAGGGTTT
Sphinx pinastri genome assembly, chromosome: 1.
OX387615.1:21414557-21414575
CCAGTAATTACGTTGGCTACAATGTCCTTC21414557AAACCGAAATACAAGAGTGCATGCACACCGCTACTTGGCGGTAGGAATA
Sphinx pinastri genome assembly, chromosome: 9.
OX387623.1:10763027-10763045
CCAGTAATTACGTCGGCGACAATCTCCTTC10763027AAACCGAAATACAAGAGTGCATGCACACTGCTGCTTGGCCTCCTTAACA
Sphinx pinastri genome assembly, chromosome: 27.
OX387641.1:3700389-3700407
CCAGTAGTTATACTGGCTACAATGTCCTTC3700389AAACCGAAATACAAGAGTGCATGCACACTGTTGCTTGGTGGTAGAAATA
Amorpha juglandis genome assembly, chromosome: Z.
OX421367.1:8640072-8640090
GCTCTTCACCCTGAGATATAAGAATCCTTC8640072AAACCGAAATACAAGAGTGCACAGAAATAAACAAAGCAGTAGGCCTCTG
Amorpha juglandis genome assembly, chromosome: 12.
OX421377.1:6178831-6178849
CCAGTAATTTCACTGGCTTCAATGTCCTTC6178831AAACCGAAATACAAGAGTGCTTACACACTGTTGCTTGGTGGCAGAAATA
Amorpha juglandis genome assembly, chromosome: 16.
OX421381.1:10928103-10928121
CCTGTAATTGAACTGGCTTCAGTGTCCTTA10928103AAACCGAAATACAAGAGTGCTTACACGCTGCTATCTAGCGGCAGATATA
Amorpha juglandis genome assembly, chromosome: 18.
OX421383.1:14411388-14411406
CCAGTAATTTCAGTGGGTTCAATGTCCTTC14411388AAACCGAAATACAAGAGTGCTTACATACTGTTGCTTGGCGGCAGAAATA
Amorpha juglandis genome assembly, chromosome: 19.
OX421384.1:9761102-9761120
CTAATAATTTCACTGGCTTCAATGTCATTC9761102AAACCGAAATACAAGAGTGCTTAGACACTGTTGCTTGGCGGTAAAAATA
Lapara coniferarum genome assembly, chromosome: 5.
OX438923.1:37935341-37935359
ATAACGCACAAGGTAAAGGCTGGGTCCCGA37935341AAACCGAAATACAAGAGTGGTTAAACAATACTGCTTCGAGGTTTATATT
Xanthorhoe designata genome assembly, chromosome: Z.
OY757035.1:7265148-7265166
TCCGATTTTAATTTTGGCGCTGTGAGAACT7265148AAACCGAAATACAAGAGTGTGATCGGTTTTAATTGTTACTATTAAATCC
Clonostachys rosea strain CR-7 chromosome 7.
CP110208.1:3310234-3310252
TTCTATCCATGCCCATTTGTGTTTTGATGG3310234CACTCTTGTATTTCGGTTTTGCTCTTCCCAGATTCTTCCTCATCTTGCC
Citrus sinensis genome assembly, chromosome: 1.
OY754318.1:22576309-22576327
AGTTTTCCAAATAAATATGATTATTATATC22576309CACTCTTGTATTTCGGTTTTTTTTTTTTTAATTATTTCCCTTTTCAGTT
Mimas tiliae genome assembly, chromosome: 2.
HG995240.1:12740543-12740561
TATTTCTGTCGCCAAGCAGCATTGTGTAGG12740543CACTCTTGTATTTCGGTTTGCAGAGCATTGAAGCCAGTGCAATTACAGG
Mimas tiliae genome assembly, chromosome: 2.
HG995240.1:14093341-14093359
GTCTGTTTCTGCCAAACAACAGTGTGCAAG14093341CACTCTTGTATTTCGGTTTGAAAGATATTAAAGACAGTGAAATTACTGG
Mimas tiliae genome assembly, chromosome: 3.
HG995241.1:12120154-12120172
TAATTGTGCTACGAAGTTGCAGTGTGTAAG12120154CACTCTTGTATTTCGGTTTCAAAGACATTGAAGCCAGTAAAATAAATTG
Mimas tiliae genome assembly, chromosome: 4.
HG995242.1:14478105-14478123
GGTATATATATTTCTGCCGCAGTTTGAAGG14478105CACTCTTGTATTTCGGTTTAAAGGACATTAAATACAGTGAAATCACTGG
Mimas tiliae genome assembly, chromosome: 10.
HG995248.1:7435437-7435455
AATTTCTGCCGCCAGGCAGCAGGGTGTAAG7435437CACTCTTGTATTTCGGTTTGAAGGACATTAAAAGCAGTGAAATTACTGG
Calamotropha paludella genome assembly, chromosome: 3.
OV656806.1:3577645-3577663
TCGATAACAAGATTGGCGTATCTTTGAATA3577645CACTCTTGTATTTCGGTTTCCTATGGGTATTTTCCCTAGTAATTTGATT
Sphinx pinastri genome assembly, chromosome: 15.
OX387629.1:11612241-11612259
TATTTCTACCGCCAAGCAACAGTGTGCATG11612241CACTCTTGTATTTCGGTTTGAAGGACATTGAAGCCAGTATAACTACTGG
Sphinx pinastri genome assembly, chromosome: 17.
OX387631.1:1988889-1988907
TATTTCTACCGCCAAGCAGCAGTGTGCATG1988889CACTCTTGTATTTCGGTTTGAAGGACATTGTAGCCAGTGTAACTACAGG
Amorpha juglandis genome assembly, chromosome: 10.
OX421375.1:12389538-12389556
TATTTCTGCCGCCAAGCAACAGTGTGTAAG12389538CACTCTTGTATTTCGGTTTGAAGGACATTGAAGTCAGTGAAATTACTGG
Amorpha juglandis genome assembly, chromosome: 11.
OX421376.1:13246560-13246578
TTATTTCTGCCGCCAAGCAGAATGTGTAAG13246560CACTCTTGTATTTCGGTTTCAAGGACATTGAAGCCAGTGAAATTACTGG
Amorpha juglandis genome assembly, chromosome: 12.
OX421377.1:4637348-4637366
TATTTCTACCGCCAAGCAGCAGTGCGTAAG4637348CACTCTTGTATTTCGGTTTGAAGGCCATTGAAGAACGCAAAATTAAAGC
Amorpha juglandis genome assembly, chromosome: 12.
OX421377.1:12971312-12971330
TATTCCTGTCGCCAAGCAAGAGTGTGGAAG12971312CACTCTTGTATTTCGGTTTGAAGGGCATTGTAGCCAGTGAAATTACTGG
Amorpha juglandis genome assembly, chromosome: 14.
OX421379.1:1062988-1063006
ACTATTTCTGCCGCCAAGCAACAGTGTAAG1062988CACTCTTGTATTTCGGTTTGAAGACATTGAAGCCAGTGAAATTACTGGG
Amorpha juglandis genome assembly, chromosome: 26.
OX421391.1:4235529-4235547
TATTTGTGCCACCAAGCAACAGTGTATAAG4235529CACTCTTGTATTTCGGTTTGTAGGACATTGAAGCCAGTGAAATTACTGG
Lapara coniferarum genome assembly, chromosome: 5.
OX438923.1:17235529-17235547
TATTTCTGCCGCCAACCAGCAGTGTGCATG17235529CACTCTTGTATTTCGGTTTGAAGGGCATTGTAGCCAGTGTAACTACAGG
Lapara coniferarum genome assembly, chromosome: 11.
OX438929.1:13901032-13901050
TATTTCTACTACCCAGCAGCAGTGTGCATG13901032CACTCTTGTATTTCGGTTTGAAGGACATTCTAGCCAGTATAACTACTGG
Lapara coniferarum genome assembly, chromosome: Z.
OX438933.1:2511774-2511792
TATTTCTACCGCCAAGCAGCATTGTGAGTG2511774CACTCTTGTATTTCGGTTTGAAGGACATTGTAGCCAGTGAAACTACTGG
Deilephila elpenor genome assembly, chromosome: 5.
OX457099.1:13788087-13788105
TATTTCTCCCGCAAAACAGCAGTGTAAATG13788087CACTCTTGTATTTCGGTTTGAAGGATATTGTAGCCAGAGTAACCGGACT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAACCGAAATACAAGAGTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAACCGAAATACAAGAGTG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.204 | 0.196 | search_plus_done; http://172.18.8.135:50400/match?q=AAACCGAAATACAAGAGTG&k=0&no_gap=0&offset=0&limit=50
0.311 | 0.106 | search_minus_done; http://172.18.8.135:50400/match?q=CACTCTTGTATTTCGGTTT&k=0&no_gap=0&offset=0&limit=35
0.324 | 0.013 | cgi_end;

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