GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 13:32:32, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus genomic DNA, chromosome 4, clone: LjT13P22, TM0079c.
AP004926.1:4495-4514
TCAGTTATCGAACTCAATGGACTAAGGCAT4495AAACGTCTAGCTTTAGAGGGAAACTAATTGTATAGGAAAATAAAGTTGGT
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:9102932-9102951
TCAGTTATCGAACTCAATGGACTAAGGCAT9102932AAACGTCTAGCTTTAGAGGGAAACTAATTGTATAGGAAAATAAAGTTGGT
Eupithecia pulchellata genome assembly, chromosome: 30.
OZ007550.1:4122224-4122243
CCGACAGATTGATAGACTTAGCAGGCGTCT4122224AAACGTCTAGCTTTAGAGGGCTTAGTGACCACTTTAGATAATATTTATAC
Eupithecia pulchellata genome assembly, chromosome: 30.
OZ007550.1:4122471-4122490
CCGACAGATTGATAGACTTAGCAGGCGTCT4122471AAACGTCTAGCTTTAGAGGGCTTAGTGACCACTTTAGATAATATTTATAC
Eupithecia pulchellata genome assembly, chromosome: 30.
OZ007550.1:4122718-4122737
CTGACATATTCATAGACTTAGCAGGCGTCT4122718AAACGTCTAGCTTTAGAGGGCTTAGTGACCACTTTGGAATATATTAATAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AAACGTCTAGCTTTAGAGGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AAACGTCTAGCTTTAGAGGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.312 | 0.303 | search_plus_done; http://172.18.8.135:50400/match?q=AAACGTCTAGCTTTAGAGGG&k=0&no_gap=0&offset=0&limit=50
0.408 | 0.096 | search_minus_done; http://172.18.8.135:50400/match?q=CCCTCTAAAGCTAGACGTTT&k=0&no_gap=0&offset=0&limit=45
0.408 | 0.000 | cgi_end;

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