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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-08 12:07:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Arvicola amphibius genome assembly, chromosome: 12.
LR862392.2:10493888-10493910
CTTGTTTGATGCACTCAGTTAAAAAAAGAA10493888AAAGAAATAAAATAAAAGAAGGGAGAAGTAAAAAAAAAAGATGGAGAGAGAGA
Rana temporaria genome assembly, chromosome: 3.
LR991682.1:11981915-11981937
CAACGCTGGATCAGATCGGGCTCAGGTTTA11981915AAAGAAATAAAATAAAAGAAGGGGGTGTCTGGGGGGAGCTGCAGCACAGAAAG
Lotus japonicus genomic DNA, chromosome 2, clone: LjT13J14, TM0682.
AP007513.2:89289-89311
TCAAAAAGACAAATATTGTTGATGATAAAT89289AAAGAAATAAAATAAAAGAAGGGAAATATAAATGTTAAATTAAATATAACCCA
Lotus japonicus genomic DNA, chromosome 2, clone: LjT47H13, TM0201.
AP006118.1:15106-15128
TCAAAAAGACAAATATTGTTGATGATAAAT15106AAAGAAATAAAATAAAAGAAGGGAAATATAAATGTTAAATTAAATATAACCCA
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:71067675-71067697
TCAAAAAGACAAATATTGTTGATGATAAAT71067675AAAGAAATAAAATAAAAGAAGGGAAATATAAATGTTAAATTAAATATAACCCA
Malus hybrid cultivar cultivar Flame chromosome 3.
CP141929.1:18526502-18526524
TGAGAGACCAGGAGGTCAGAGAGGTGAGGG18526502AAAGAAATAAAATAAAAGAAGGGGAAGCACAGGAATACACGGAGGAGAAAAGA
Malus hybrid cultivar cultivar Flame chromosome 7.
CP141933.1:17340168-17340190
AAAGAGACCAGGAGGTCAGAGAGGTGAGGG17340168AAAGAAATAAAATAAAAGAAGGGGAAGCACAGGAAGGGAAGGGGGAGAAAACA
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:24301759-24301781
AAGAAAGACAGCGTGAAGAAGAGGTGAGGG24301759AAAGAAATAAAATAAAAGAAGGGGAAGCACAGGAATACGGGGAGGAGGAAACC
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:24309257-24309279
AAGAAAGACAGCGTGAAGAAGAGGTGAGGG24309257AAAGAAATAAAATAAAAGAAGGGGAAGCACAGGAATACGGGGAGGAGGAAACC
Malus hybrid cultivar cultivar Royalty chromosome 7.
CP141959.1:15345453-15345475
TGAGAGACCAGGAGGTCAGAGAGGTGAGGG15345453AAAGAAATAAAATAAAAGAAGGGGAAGCACAGGAATACACTGAGGAGAAAACA
Malus hybrid cultivar cultivar Royalty chromosome 16.
CP141985.1:27587859-27587881
TGAGAGACCAGGAGGTCAGAGAGGTGAGGG27587859AAAGAAATAAAATAAAAGAAGGGGAAGCACAGGAATACACTGAGGAGAAAACA
Malus hybrid cultivar cultivar SH6 chromosome 3.
CP143360.1:17414988-17415010
TGAGAGACCAGGAGGTCAGAGAGGTGAGGG17414988AAAGAAATAAAATAAAAGAAGGGGAAGCACAGGAATACACGGAGGAGAAAAGA
Malus domestica genome assembly, chromosome: 3.
OU696679.1:17932130-17932152
TGAGAGACCAGGAGGTCAGAGAGGTGAGGG17932130AAAGAAATAAAATAAAAGAAGGGGAAGCACAGGAATACACGGAGGAGAAAAGA
Malus domestica genome assembly, chromosome: 3.
OU744544.1:18306815-18306837
TGAGAGACCAGGAGGTCAGAGAGGTGAGGG18306815AAAGAAATAAAATAAAAGAAGGGGAAGCACAGGAATACACGGAGGAGAAAAGA
Malus domestica genome assembly, chromosome: 3.
OU744955.1:17730750-17730772
TGAGAGACCAGGAGGTCAGAGAGGTGAGGG17730750AAAGAAATAAAATAAAAGAAGGGGAAGCACAGGAATACACGGAGGAGAAAAGA
Malus domestica genome assembly, chromosome: 11.
OU744963.1:23968992-23969014
AAGAAAGACAGCGTGAAGAAGAGGTGAGGG23968992AAAGAAATAAAATAAAAGAAGGGGAAGCACAGGAATACGGGGAGGAGGAAACC
Malus domestica genome assembly, chromosome: 11.
OU744963.1:23976490-23976512
AAGAAAGACAGCGTGAAGAAGAGGTGAGGG23976490AAAGAAATAAAATAAAAGAAGGGGAAGCACAGGAATACGGGGAGGAGGAAACC
Malus domestica genome assembly, chromosome: 3.
OU744993.1:18361455-18361477
TGAGAGACCAGGAGGTCAGAGAGGTGAGGG18361455AAAGAAATAAAATAAAAGAAGGGGAAGCACAGGAATACACGGAGGAGAAAAGA
Agonum fuliginosum genome assembly, chromosome: 5.
OX384034.1:25707415-25707437
GTATTTATAAATAATACATTTGTTTCAATG25707415AAAGAAATAAAATAAAAGAAGGGCATAATATAAGTATTTAGTTTGGATTTAAT
Gastracanthus pulcherrimus genome assembly, chromosome: 1.
OX424572.1:41109934-41109956
TAGGGTAAAAGGTATAATAAAGTCACACGG41109934AAAGAAATAAAATAAAAGAAGGGCTGTTTCAGGGATGACAATATAACCTCTCA
Agrochola lychnidis genome assembly, chromosome: 23.
OY796870.1:10784619-10784641
TGACGGCTAAAGAATCATGGATTCTTAGGT10784619AAAGAAATAAAATAAAAGAAGGGGTGAATATGATGGCCGATTGCTTTATACGT
Lateolabrax maculatus linkage group 17 genomic sequence, sequence.
CP032591.1:9974920-9974942
CTCTCCTTGTGCACTCCTCATTTCTTTCTC9974920CCCTTCTTTTATTTTATTTCTTTAAAAGTCTTCCTCGTCTTTCCATCCTTGCA
Malus hybrid cultivar cultivar Royalty chromosome 7.
CP141976.1:14644144-14644166
CTCTTTCTCCTCCGTGTATTCCTGTGCTTC14644144CCCTTCTTTTATTTTATTTCTTTCCCTCACCTCTCTGACCTCCTGGTCTCTCA
Malus sylvestris genome assembly, chromosome: 7.
OU696509.1:19120842-19120864
TGTTTTCTCCCCCTTCCCTTCCTGTGCTTC19120842CCCTTCTTTTATTTTATTTCTTTCCCTCACCTCTCTGACCTCCTGGTCTCTTT
Malus sylvestris genome assembly, chromosome: 8.
OU696510.1:18104775-18104797
TGTTTTCTCCTCCTTGTATTCCTGTGCTTC18104775CCCTTCTTTTATTTTATTTCTTTCCCTCACCTATCTGGCCTCCTGGTCTCTCA
Malus sylvestris genome assembly, chromosome: 14.
OU696516.1:16453259-16453281
TGTTTTCTCCTCCGTGTATTCCTGTGCTTC16453259CCCTTCTTTTATTTTATTTCTTTCCCTCACCTCCGTGTCATGCCTTCTGTTTC
Malus sylvestris genome assembly, chromosome: 14.
OU696516.1:16460356-16460378
TGTTTTCTCCTCCGTGTATTCATGTGCTTC16460356CCCTTCTTTTATTTTATTTCTTTCCCTCACCTCCGTGTCATGCCTTCTGTTTC
Malus domestica genome assembly, chromosome: 7.
OU696683.1:14340868-14340890
TCTTTTCTCCTCCGTGTATTCCTGTGCTTC14340868CCCTTCTTTTATTTTATTTCTTTCCCTCACCTCTCTGACCTCCTGGTCTCTCA
Malus domestica genome assembly, chromosome: 7.
OU696683.1:18383180-18383202
TGTTTTCTCCCCCTTCCCTTCCTGTGCTTC18383180CCCTTCTTTTATTTTATTTCTTTCCCTCACCTCTCTGACCTCCTGGTCTCTTT
Malus domestica genome assembly, chromosome: 7.
OU744548.1:15348611-15348633
TCTTTTCTCCTCCGTGTATTCCTGTGCTTC15348611CCCTTCTTTTATTTTATTTCTTTCCCTCACCTCTCTGACCTCCTGGTCTCTCA
Malus domestica genome assembly, chromosome: 7.
OU744548.1:19469636-19469658
TGTTTTCTCCCCCTTCCCTTCCTGTGCTTC19469636CCCTTCTTTTATTTTATTTCTTTCCCTCACCTCTCTGACCTCCTGGTCTCTTT
Malus domestica genome assembly, chromosome: 8.
OU744549.1:18228710-18228732
TGTTTTCTCCTCCTTGTATTCCTGTGCTTC18228710CCCTTCTTTTATTTTATTTCTTTCCCTCACCTATCTGGCCTCCTGGTCTCTCA
Malus domestica genome assembly, chromosome: 7.
OU744959.1:18257676-18257698
TGTTTTCTCCCCCTTCCCTTCCTGTGCTTC18257676CCCTTCTTTTATTTTATTTCTTTCCCTCACCTCTCTGACCTCCTGGTCTCTTT
Malus domestica genome assembly, chromosome: 10.
OU744962.1:17755837-17755859
TCTTTTCTCCTCCGTGTATTCCTGTGCTTC17755837CCCTTCTTTTATTTTATTTCTTTCCCTCACCTCTCTGACCTCCTGGTCTCTCA
Malus x robusta genome assembly, chromosome: 3.
OY720327.1:26261951-26261973
TGTTTTCTCCTCAGTGTATTCCTGTGCTTC26261951CCCTTCTTTTATTTTATTTCTTTCCCTCACCTCTCTGACCTCCTGGTCTCTCA
Malus x robusta genome assembly, chromosome: 6.
OY720330.1:15321923-15321945
TCTCTGGTTCCTCCCCCTATTATGTGCTTC15321923CCCTTCTTTTATTTTATTTCTTTCCGTTCTGCGCCCTTTCTTTTTTATTTCTT
Malus x robusta genome assembly, chromosome: 6.
OY720330.1:15328953-15328975
TCTCTGGTTCCTCCCCCTATTCTGTGCTTC15328953CCCTTCTTTTATTTTATTTCTTTCCGTTCTGCGCCCTTTCTTTTTTATTTCTT
Cardamine chenopodiifolia genome assembly, chromosome: 10.
OZ000468.1:1853979-1854001
ATTTTTATTTTTATTTTTTATGCAATGATT1853979CCCTTCTTTTATTTTATTTCTTTGGAGTGTAAGACCGTAGGACCCACTTTTCA
Rutpela maculata genome assembly, chromosome: 5.
OW386289.2:139440592-139440614
TTTAGCGCTTTCTTCAGTAGATGCATTAGT139440592CCCTTCTTTTATTTTATTTCTTTATTTGTTTCCTTTCTTGTCTATCCATGTAT
Dorcus parallelipipedus genome assembly, chromosome: 1.
OY284475.1:64223914-64223936
CTTGCTTAAGGTGCAGGTGTATGTGTTTCT64223914CCCTTCTTTTATTTTATTTCTTTTATTTATAAATCTATAACATGCATGGCTTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAAGAAATAAAATAAAAGAAGGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAGAAATAAAATAAAAGAAGGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.343 | 0.335 | search_plus_done; http://172.18.8.135:50400/match?q=AAAGAAATAAAATAAAAGAAGGG&k=0&no_gap=0&offset=0&limit=50
0.491 | 0.148 | search_minus_done; http://172.18.8.135:50400/match?q=CCCTTCTTTTATTTTATTTCTTT&k=0&no_gap=0&offset=0&limit=29
0.504 | 0.012 | cgi_end;

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