GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 23:12:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Homo sapiens BAC clone GS1-281N8 from 7, complete sequence.
AC006459.3:148533-148552
AATCAGGCTGGTATCTTTACGTTGCTAGAG148533AAAGAAGCCTCCTGCAAAATCTAGGTCAATCTTTGTAAGACGGATTTCAC
Pan troglodytes BAC clone CH251-487F13 from chromosome 7, complete sequence.
AC190156.3:111395-111414
AATCAGGCTGGTATCTTTACGTTGCTAGAG111395AAAGAAGCCTCCTGCAAAATCTAGGTCAATCTTTGTAAGAAGGATTTCAC
Trifolium pratense DNA, clone:RC0245f.ab1.
DE245037.1:93-112
TGCAACATAACCCCAACCATCTGCCGTAAT93AAAGAAGCCTCCTGCAAAATAAGAGTCTTAGACCCCTACAGATGCAAAAA
Osmia bicornis bicornis genome assembly, chromosome: 8.
OU015511.1:3034678-3034697
AAAAATAGGGCAACAGTAAAAAAAGATTAT3034678AAAGAAGCCTCCTGCAAAATGGGGCCTGGGTCTATAGCCCCCGTAAACTT
Mythimna vitellina genome assembly, chromosome: 4.
OX438688.1:24379497-24379516
AAAACTCTTTAGTGTTTACCTGAATCCTAT24379497AAAGAAGCCTCCTGCAAAATTATATTACGTTCTTAGTCTCACTAGTTTCG
Homo sapiens DNA, chromosome 7, nearly complete genome.
AP023467.1:52398371-52398390
GTGAAATCCGTCTTACAAAGATTGACCTAG52398371ATTTTGCAGGAGGCTTCTTTCTCTAGCAACGTAAAGATACCAGCCTGATT
Homo sapiens isolate CHM13 chromosome 7.
CP068271.2:52533910-52533929
GTGAAATCCGTCTTACAAAGATTGACCTAG52533910ATTTTGCAGGAGGCTTCTTTCTCTAGCAACGTAAAGATACCAGCCTGATT
Homo sapiens isolate NA24385 chromosome 7.
CP139514.1:52478698-52478717
GTGAAATCCGTCTTACAAAGATTGACCTAG52478698ATTTTGCAGGAGGCTTCTTTCTCTAGCAACGTAAAGATACCAGCCTGATT
Homo sapiens isolate NA24385 chromosome 7.
CP139537.1:52502058-52502077
GTGAAATCCGTCTTACAAAGATTGACCTAG52502058ATTTTGCAGGAGGCTTCTTTCTCTAGCAACGTAAAGATACCAGCCTGATT
Meles meles genome assembly, chromosome: 8.
OV277449.1:99859407-99859426
TTATTTTTAATCTATTTTGCCTCTGTAATC99859407ATTTTGCAGGAGGCTTCTTTTGGCAGAGTTGGTTTTATATTTATTCATTC
Meles meles genome assembly, chromosome: 8.
OV277449.1:100215793-100215812
TTATTTTTAATCTATTTTGCCTCTGTAATC100215793ATTTTGCAGGAGGCTTCTTTTGGCAGAGTTGGTTTTATATTTATTCAGTC
Martes martes genome assembly, chromosome: 10.
OY734073.1:96700430-96700449
TTATTTTTGGTCTATTTTGCATCTGTAATC96700430ATTTTGCAGGAGGCTTCTTTTGGCAAAGAGTTGGTTTTATTTTTAGACAG
Martes martes genome assembly, chromosome: 10.
OY734073.1:96774449-96774468
TTATTTTTAGTCTATTTTGCATCTGTAATC96774449ATTTTGCAGGAGGCTTCTTTTGGCAAAGAGTTGGTTTTATTTTTAGACAG
Sequence 3688 from Patent WO0157270.
CQ052868.1:93-112
GTGAAATCCGTCTTACAAAGATTGACCTAG93ATTTTGCAGGAGGCTTCTTTCTCTAGCAACGTAAAGATACCAGCCTGATT
Sequence 3757 from Patent WO0157278.
CQ067957.1:93-112
GTGAAATCCGTCTTACAAAGATTGACCTAG93ATTTTGCAGGAGGCTTCTTTCTCTAGCAACGTAAAGATACCAGCCTGATT
Sequence 3875 from Patent WO0157272.
CQ095016.1:93-112
GTGAAATCCGTCTTACAAAGATTGACCTAG93ATTTTGCAGGAGGCTTCTTTCTCTAGCAACGTAAAGATACCAGCCTGATT
Sequence 3709 from Patent WO0157274.
CQ172313.1:93-112
GTGAAATCCGTCTTACAAAGATTGACCTAG93ATTTTGCAGGAGGCTTCTTTCTCTAGCAACGTAAAGATACCAGCCTGATT
Sequence 3756 from Patent WO0157271.
CQ201479.1:93-112
GTGAAATCCGTCTTACAAAGATTGACCTAG93ATTTTGCAGGAGGCTTCTTTCTCTAGCAACGTAAAGATACCAGCCTGATT
Sequence 3843 from Patent WO0157277.
CQ255582.1:93-112
GTGAAATCCGTCTTACAAAGATTGACCTAG93ATTTTGCAGGAGGCTTCTTTCTCTAGCAACGTAAAGATACCAGCCTGATT
Sequence 3776 from Patent WO0186003.
CQ292671.1:93-112
GTGAAATCCGTCTTACAAAGATTGACCTAG93ATTTTGCAGGAGGCTTCTTTCTCTAGCAACGTAAAGATACCAGCCTGATT
Sequence 3757 from Patent WO0157275.
CQ329663.1:93-112
GTGAAATCCGTCTTACAAAGATTGACCTAG93ATTTTGCAGGAGGCTTCTTTCTCTAGCAACGTAAAGATACCAGCCTGATT
Eukaryotic synthetic construct chromosome 7.
CP034506.1:52430597-52430616
GTGAAATCCGTCTTACAAAGATTGACCTAG52430597ATTTTGCAGGAGGCTTCTTTCTCTAGCAACGTAAAGATACCAGCCTGATT
Eukaryotic synthetic construct chromosome 7.
CP034531.1:52430597-52430616
GTGAAATCCGTCTTACAAAGATTGACCTAG52430597ATTTTGCAGGAGGCTTCTTTCTCTAGCAACGTAAAGATACCAGCCTGATT
Nemotelus nigrinus genome assembly, chromosome: 1.
OX376372.1:86908671-86908690
GGTATGCTCGCGTATTGGAGCAGCAAAATA86908671ATTTTGCAGGAGGCTTCTTTTTGTGGCAACTTTTCGCTTGCAGCAAGAGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AAAGAAGCCTCCTGCAAAAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAGAAGCCTCCTGCAAAAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.126 | 0.117 | search_plus_done; http://172.18.8.135:50400/match?q=AAAGAAGCCTCCTGCAAAAT&k=0&no_gap=0&offset=0&limit=50
0.166 | 0.040 | search_minus_done; http://172.18.8.135:50400/match?q=ATTTTGCAGGAGGCTTCTTT&k=0&no_gap=0&offset=0&limit=45
0.178 | 0.012 | cgi_end;

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