GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 05:03:58, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Octopus vulgaris genome assembly, chromosome: 8.
OX597821.1:94623259-94623280
TAGAAAGAAAAGTACAAAGAGGGTGGTCTG94623259AAAGAATCAGTCAATAGGAATGGTATTAATTATATTCGGGGGTCGCTAACGA
Lotus japonicus genomic DNA, chromosome 1, clone: LjT16J16, TM1635.
AP010235.1:73786-73807
TGTTGTTATGTAGCACAGAGTCAAACTTTA73786CATTCCTATTGACTGATTCTTTTTCAAAACGAATTTAATATTATGTTACGTT
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:99422430-99422451
TGTTGTTATGTAGCACAGAGTCAAACTTTA99422430CATTCCTATTGACTGATTCTTTTTCAAAACGAATTTAATATTATGTTACGTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AAAGAATCAGTCAATAGGAATG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAGAATCAGTCAATAGGAATG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.092 | 0.083 | search_plus_done; http://172.18.8.135:50400/match?q=AAAGAATCAGTCAATAGGAATG&k=0&no_gap=0&offset=0&limit=50
0.106 | 0.014 | search_minus_done; http://172.18.8.135:50400/match?q=CATTCCTATTGACTGATTCTTT&k=0&no_gap=0&offset=0&limit=49
0.107 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).