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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 14:41:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Felis catus Senzu DNA, chromosome: D3, American Shorthair breed.
AP023163.1:18231735-18231754
GCCGTTTCTCCATTAGCTCCTCCAGCCCAA18231735AAAGCAAAAGAAGGGACGAGAAGAGGCACAAAAAACAGTAAGTAGGGAGC
Setaria viridis cultivar ME034v chromosome 1.
CP050795.1:4162935-4162954
AAATTCCAAAAGAGAACAGTGATAACCTGA4162935AAAGCAAAAGAAGGGACGAGCAATGTTTATCACTGTGTGATTTGAGGGCG
Warburgia ugandensis isolate CL-2023a chromosome 5.
CP141130.1:19281782-19281801
CTCCCAGCTTGAGTCCGATCCCAATCACCA19281782AAAGCAAAAGAAGGGACGAGAAAAGAGAATGGCAGGGACTGCTTTGTCAC
Triticum aestivum genome assembly, chromosome: 2B.
LR862512.1:784070817-784070836
CCAGGTCACTTCACGGGTAGGGGGAGGAAG784070817AAAGCAAAAGAAGGGACGAGAACAAGCAGCTTATATACAGTAGCGCCGTG
Triticum aestivum genome assembly, chromosome: 2B.
LR862533.1:660819500-660819519
CCAGGTCACTTCACGGGTAGGGGGAGGAAG660819500AAAGCAAAAGAAGGGACGAGAACAAGCAGCTTATATACAGTAGCGCCGTG
Noctua janthe genome assembly, chromosome: 13.
OU342565.1:13774363-13774382
TAGCAGTGACCTGTACCTGACCCCTATTAC13774363AAAGCAAAAGAAGGGACGAGGGGAATTGAAGAAGAAAAGAATTGCAGGAC
Ancistrocerus nigricornis genome assembly, chromosome: 4.
OU696667.1:7474237-7474256
TGACAGGAACGTTTAACGAGTTTCTTAGAG7474237AAAGCAAAAGAAGGGACGAGAGAAGACCTTTCTAGCCTTGTCTGGATATG
Diabrotica virgifera virgifera genome assembly, chromosome: 3.
OU830626.1:229891851-229891870
GATATAAATCTCGTTAAAGTATATGCACCA229891851AAAGCAAAAGAAGGGACGAGAAGTTAGAACATTTTTACTCTGATATTAAT
Muscardinus avellanarius genome assembly, chromosome: 4.
OY726560.1:60673786-60673805
TCATTTTTCTTAACATTCACTGCTTCCCAT60673786CTCGTCCCTTCTTTTGCTTTTAATAAAATAGATATATTGACAATTTCCAA
Cervus elaphus genome assembly, chromosome: 29.
OU343106.1:61076028-61076047
CTGGTAGTGGCGCCTGAGGTGTTTTACACA61076028CTCGTCCCTTCTTTTGCTTTTGTCCCCTTCCCAGTAAGATTGTCAGATTT
Lotus japonicus genomic DNA, chromosome 5, clone: LjB06H02, BM1787.
AP010430.1:38749-38768
ATATGACTCCCCTAAGATAGAAGCATTAAG38749CTCGTCCCTTCTTTTGCTTTTCCAAGTAATTAACATGATAATGACAATAT
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:10013465-10013484
ATATGACTCCCCTAAGATAGAAGCATTAAG10013465CTCGTCCCTTCTTTTGCTTTTCCAAGTAATTAACATGATAATGACAATAT
Triticum aestivum genome assembly, chromosome: 2B.
LR878439.1:788157260-788157279
CACGGCGCTACTGTATATAAGCTGCTTGTT788157260CTCGTCCCTTCTTTTGCTTTCTTCCTCCCCCTACCCGTGAAGTGACCTGG
Triticum aestivum genome assembly, chromosome: 2B.
LS992084.1:787076145-787076164
CACGGCGCTACTGTATATAAGCTGCTTGTT787076145CTCGTCCCTTCTTTTGCTTTCTTCCTCCCCCTACCCGTGAAGTGACCTGG
Triticum aestivum genome assembly, chromosome: 2B.
OU015725.1:790430872-790430891
CACGGCGCTACTGTATATAAGCTGCTTGTT790430872CTCGTCCCTTCTTTTGCTTTCTTCCTCCCCCTACCCGTGAAGTGACCTGG
Triticum aestivum genome assembly, chromosome: 2B.
OU343177.1:801089241-801089260
CACGGCGCTACTGTATATAAGCTGCTTGTT801089241CTCGTCCCTTCTTTTGCTTTCTTCCTCCCCCTACCCGTGAAGTGACCTGG
Berberis vulgaris genome assembly, chromosome: 5.
OY747128.1:25996728-25996747
ACCCCAATAATCTTGTTATTTAGAGATATT25996728CTCGTCCCTTCTTTTGCTTTCATTACATTTGTAAGATGCATTGGTGGAGC
Eudemis profundana genome assembly, chromosome: 16.
OX344810.1:18528479-18528498
CCTGAAGTTGACAGTGAGCAAAGAATGTCC18528479CTCGTCCCTTCTTTTGCTTTGGGCTTAAAATCACTAAATCTCATAATACC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAAGCAAAAGAAGGGACGAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAGCAAAAGAAGGGACGAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.214 | 0.205 | search_plus_done; http://172.18.8.135:50400/match?q=AAAGCAAAAGAAGGGACGAG&k=0&no_gap=0&offset=0&limit=50
0.253 | 0.039 | search_minus_done; http://172.18.8.135:50400/match?q=CTCGTCCCTTCTTTTGCTTT&k=0&no_gap=0&offset=0&limit=42
0.260 | 0.007 | cgi_end;

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