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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:43:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

KS12019B12 KS12 Capsicum annuum cDNA, mRNA sequence.
CA523162.1:32-51
ACGAGGGGATTATGTAGCATGTGTGTAAAA32AAAGCTTTGTGCACATTTCGTTTCTTTAATCACACACACACATATATATA
TSA: Capsicum annuum EJ_MegaContig_23610, mRNA sequence.
JW133514.1:707-726
ACTGTTGGATTGTGTAGCATGTGTGTAAAA707AAAGCTTTGTGCACATTTCGTTTCTTTAATCATGCATATATAGATATAGA
Capsicum annuum Takanotsume DNA, chromosome 2, sequence.
AP026697.1:72929120-72929139
TGTTGGATTGTGTAGCATATGCGTAAAAAA72929120AAAGCTTTGTGCACATTTCGTTTCTTTAATCATGCATATATAGATATACA
Capsicum annuum Takanotsume DNA, chromosome 3, sequence.
AP026698.1:269599189-269599208
ACTGTTGGATTGTGTAGCATGTGTGTAAAA269599189AAAGCTTTGTGCACATTTCGTTTCTTTAATCATGCATATATAGATATAGA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 6.
CP124726.1:72033061-72033080
ACTGTTGATTGTGTAGCATGTGTGTAAAAA72033061AAAGCTTTGTGCACATTTCGTTTCTTTAATCATGCATATATAGACATACA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 2.
CP124730.1:73239167-73239186
TGTTGGATTGTGTAGCATATGCGTAAAAAA73239167AAAGCTTTGTGCACATTTCGTTTCTTTAATCATGCATATATAGATATACA
Eilema caniola genome assembly, chromosome: 6.
OX421467.1:18280216-18280235
CAAAAATCTTTTGCTTTAAACGAGTTTTTG18280216AAAGCTTTGTGCACATTTCGACACTTTACCTTAAACGAAAGCGGTCCATA
Biston stratarius genome assembly, chromosome: 3.
OX467108.1:1066545-1066564
CAGAAGTGTCCTTTTTGACAATGCACATCA1066545AAAGCTTTGTGCACATTTCGCAAAATGGACTGTTTAATTTGTATAGCTTC
Trididemnum clinides genome assembly, chromosome: 2.
OY776285.1:40252376-40252395
TTAAATTCAGTAAAAGGGTCGCAGCCTTGA40252376AAAGCTTTGTGCACATTTCGCGATATCCAGCAACATCTTGCTACACACTA
Oryzias latipes strain HSOK chromosome 17.
CP020637.1:30553030-30553049
CGAAAAGCAACAAACAGGTTTTTTGTAGTA30553030CGAAATGTGCACAAAGCTTTTATTTCTTTAGCTGGTTTCCCTTTTAATGC
TSA: Capsicum annuum MGMT_Contig3672, mRNA sequence.
JW053916.1:1317-1336
TCTATATCTATATATGCATGATTAAAGAAA1317CGAAATGTGCACAAAGCTTTTTTTACACACATGCTACACAATCCAACAGT
Capsicum annuum Takanotsume DNA, chromosome 5, sequence.
AP026700.1:42873792-42873811
TATATATATATGTGTGTGTGATTAAAGAAA42873792CGAAATGTGCACAAAGCTTTTTTTACACACATGCTACATAATCCAACAAT
Capsicum annuum Takanotsume DNA, chromosome 6, sequence.
AP026701.1:181183713-181183732
TGTATGTCTATATATGCATGATTAAAGAAA181183713CGAAATGTGCACAAAGCTTTTTTTTACACACATGCTACACAATCAACAGT
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 4.
CP124716.1:12356924-12356943
TTCATCTATATATATGCATGAATGAATAAA12356924CGAAATGTGCACAAAGCTTTTTTTACACACATGCTACACAATCCAACAGT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 5.
CP124727.1:42726200-42726219
TATATATATATGTGTGTGTGATTAAAGAAA42726200CGAAATGTGCACAAAGCTTTTTTTACACACATGCTACATAATCCAACAAT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 3.
CP124729.1:22285921-22285940
TCTATATCTATATATGCATGATTAAAGAAA22285921CGAAATGTGCACAAAGCTTTTTTTACACACATGCTACACAATCCAACAGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAAGCTTTGTGCACATTTCG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAGCTTTGTGCACATTTCG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.204 | 0.195 | search_plus_done; http://172.18.8.135:50400/match?q=AAAGCTTTGTGCACATTTCG&k=0&no_gap=0&offset=0&limit=50
0.309 | 0.105 | search_minus_done; http://172.18.8.135:50400/match?q=CGAAATGTGCACAAAGCTTT&k=0&no_gap=0&offset=0&limit=41
0.314 | 0.005 | cgi_end;

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