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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 09:03:41, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sciurus carolinensis genome assembly, chromosome: 10.
LR738599.1:81588605-81588624
AAGAAGCAAAGTACCTTGTCCCAGGCTCAA81588605AAAGGACAAAGAGGAAGGGCTGAGATTTCAAACCCAGATACATTTCTTGA
Sciurus vulgaris genome assembly, chromosome: 9.
LR738619.1:86112279-86112298
AAGAATCAAAGTACCTTGTCCCAGGCTCAA86112279AAAGGACAAAGAGGAAGGGCTGAGATTTCAAACCCAGATACATTTCTTGA
Heterocephalus glaber genome assembly, chromosome: 20.
OX090928.1:45704740-45704759
GCAGCTGGCTTCCCCAGAGTGAGCTATCTT45704740AAAGGACAAAGAGGAAGGGCAATGTCTTCTAGCCTGAGTGGATGCACAGC
Heterocephalus glaber genome assembly, chromosome: 20.
OX090960.1:41950807-41950826
GCAGCTGGCTTCCCCAGAGTGAGCTATCTT41950807AAAGGACAAAGAGGAAGGGCAATGTCTTCTAGCCTGAGTGGATGCACAGC
Heterocephalus glaber genome assembly, chromosome: 18.
OZ001083.1:21966955-21966974
GCAGCTGGCTTCCCCAGAGTGAGCTATCTT21966955AAAGGACAAAGAGGAAGGGCAATGTCTTCTAGCCTGAGTGGATGCACAGC
Heterocephalus glaber genome assembly, chromosome: 18.
OZ001126.1:23581857-23581876
GCAGCTGGCTTCCCCAGAGTGAGCTATCTT23581857AAAGGACAAAGAGGAAGGGCAATGTCTTCTAGCCTGAGTGGATGCACAGC
Pipistrellus pipistrellus genome assembly, chromosome: 4.
LR862360.1:53055263-53055282
TGAGGTGTTGACTGTCAATACCTGGGGGGA53055263AAAGGACAAAGAGGAAGGGCAGTGGCTTAGGGGCACAGATGATGCATTGA
Echeneis naucrates genome assembly, chromosome: 10.
LR584051.1:10358296-10358315
CCTGAATCTGGGCATCTCTGGCGAATTCAG10358296AAAGGACAAAGAGGAAGGGCACATGAGCCGAGACTAGTGCAACAGGTCAC
Syngnathus acus genome assembly, chromosome: 10.
LR594595.1:27832602-27832621
AGGAAAAATAGAGAATGAAAAAAAAAAGAA27832602AAAGGACAAAGAGGAAGGGCCGAGCAGGCCGTTTGCCCGGTGGGGGCTGA
Thunnus maccoyii genome assembly, chromosome: 15.
OU343205.1:19296241-19296260
CAGACAAAGAAGCCTGAGGATGAATGGAGC19296241AAAGGACAAAGAGGAAGGGCTAAGGACAACAAAGGGGCGCAAACTGGTTA
Syngnathus acus genome assembly, chromosome: 10.
OX411221.1:27581437-27581456
AGGAAAAATAGAGAATGAAAAAAAAAAGAA27581437AAAGGACAAAGAGGAAGGGCCGAGCAGGCCGTTTGCCCGGTGGGGGCTGA
Brassica napus cultivar Xiang5A chromosome 15.
CP123890.1:7633589-7633608
AATAAGAAATGACAAAAATAGCCTCCTAAG7633589AAAGGACAAAGAGGAAGGGCTAATCTGGGTATTTTCGAGAAACTCAACTT
Agrostemma githago genome assembly, chromosome: 14.
OY288252.1:62901419-62901438
TTACCAGGTTTGAAGAGAGAACTTCAGTAT62901419AAAGGACAAAGAGGAAGGGCGATAGAGGGTCACCCTGTCGAAGCCCACGC
Plectropomus leopardus DNA, chromosome 14, nearly complete sequence.
AP022713.1:21186813-21186832
GCCTTTAAGTGTCACACAACCAGTCTGTGT21186813GCCCTTCCTCTTTGTCCTTTGTGACTGCTTATATAGTGTCCATGTGTACA
lke36c12.b1 B.oleracea002 Brassica oleracea genomic, genomic survey sequence.
BZ072273.1:531-550
AAGTTGAGTTTCTCGAAAATACCCAGATTA531GCCCTTCCTCTTTGTCCTTTTTTAGGAGGCTATTTTTGTCATTTCTTATT
PV_ABa038J10.R PV_ABa Panicum virgatum genomic 3', genomic survey sequence.
HR346733.1:1021-1040
ATTCTCTCTAGTGTGGCACTCGCTTTAGTT1021GCCCTTCCTCTTTGTCCTTTTG
Brassica napus cultivar Xiang5A chromosome 4.
CP123879.1:63503106-63503125
AAGTTGAGTTTCTAGAAAATACCCAGATTA63503106GCCCTTCCTCTTTGTCCTTTCTTAGGAGGCTATGTTTGTCATTTCTTATT
Brassica napus genome assembly, chromosome: A09.
HG994363.1:47325571-47325590
AAGTTGAGTTTCTGGAAAATACCCAGATTA47325571GCCCTTCCTCTTTGTCCTTTCTTAGGAGGCTATGTTTGTCATTTCTTATT
Brassica napus genome assembly, chromosome: C08.
HG994372.1:34149355-34149374
AAGTTGAGTTTCTCGAAAATACCCAGATTA34149355GCCCTTCCTCTTTGTCCTTTCTTAGGAGGCTATTTTTGTCATTTCTTATT
Brassica rapa genome, scaffold: A09.
LR031568.1:51568772-51568791
AAGTTGAGTTTCTGGAAAATACCCAGATTA51568772GCCCTTCCTCTTTGTCCTTTCTTAGGAGGCTATGTTTGTCATTTCTTATT
Brassica oleracea HDEM genome, scaffold: C8.
LR031879.1:43439287-43439306
AAGTTGAGTTTCTCGAAAATACCCAGATTA43439287GCCCTTCCTCTTTGTCCTTTTTTAGGAGGCTATTTTTGTCATTTCTTATT
Brassica rapa genome assembly, chromosome: A09.
LS974625.2:62041737-62041756
AAGTTGAGTTTCTGGAAAATACCCAGATTA62041737GCCCTTCCTCTTTGTCCTTTCTTAGGAGGCTATGTTTGTCATTTCTTATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAAGGACAAAGAGGAAGGGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAGGACAAAGAGGAAGGGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.123 | 0.114 | search_plus_done; http://172.18.8.135:50400/match?q=AAAGGACAAAGAGGAAGGGC&k=0&no_gap=0&offset=0&limit=50
0.226 | 0.103 | search_minus_done; http://172.18.8.135:50400/match?q=GCCCTTCCTCTTTGTCCTTT&k=0&no_gap=0&offset=0&limit=37
0.232 | 0.006 | cgi_end;

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