GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 06:06:33, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Arachis hypogaea cultivar Shitouqi chromosome A03.
CP030985.1:13597159-13597178
CGCAACAAGCGAAAAACAAGCACATGTCCG13597159AAAGGAGCGAAAAATACGCAAACGTGCGAAACGAGCGAAAAACACAAAAA
Arachis hypogaea cultivar Shitouqi chromosome B05.
CP030997.1:10125220-10125239
CAACATGAGCGAAAAATACACATATGTGCG10125220AAAGGAGCGAAAAATACGCACACGTGCGAAACGAGCGAAAAACAAAAATA
Arachis hypogaea cultivar Shitouqi chromosome B05.
CP030997.1:10128369-10128388
CAACATGAGCGAAAAATACACACACGTGCG10128369AAAGGAGCGAAAAATACGCACACGTGCGAAACGAGCAAAAAACAAAAATA
Arachis ipaensis cultivar K30076 chromosome 05.
CP049896.1:16255696-16255715
CAACATGAGCGAAAAATACACACACGTGCG16255696AAAGGAGCGAAAAATACGCACACGTGCGAAACGAGCAAAAAAACAAAATA
Meta bourneti genome assembly, chromosome: 8.
OW119929.1:1833142-1833161
AATAAAATTTAGATACAACATAAAATTCAA1833142AAAGGAGCGAAAAATACGCACTTAACGTTGAGGGTCCTCCATGAATGTTG
Zeus faber genome assembly, chromosome: 19.
OY482863.1:12270590-12270609
GAAGAAAACACGGTATTTGCACTTTAGTTC12270590TGCGTATTTTTCGCTCCTTTCATGAGCATGAACAGCACCTTGCACACAGT
Arachis hypogaea DNA, clone: AHGS48F15.
DH961653.1:175-194
TATTTTTGTTTTTTGCTCGTTTCGCACGTG175TGCGTATTTTTCGCTCCTTTCGCACGTGTGTGTATT
Arachis hypogaea DNA, clone: KIAC04G10.
DH965821.1:330-349
TGTGTGTGTCCTTTTTCTCATTCGCACGTA330TGCGTATTTTTCGCTCCTTTTGCACCTGTGTCTTTTTCGCTCGTATTGCA
Arachis hypogaea cultivar Shitouqi chromosome A05.
CP030987.1:41062727-41062746
TGTGTGTGTCCTTTTTCTCATTCGCACGTA41062727TGCGTATTTTTCGCTCCTTTTGCACCTGTGTCTTTTTCGCTCGTATTGCA
Arachis hypogaea cultivar Shitouqi chromosome B09.
CP031001.1:14784697-14784716
TGTGCGTGTTTTTTTGCTCGTTTTCACATG14784697TGCGTATTTTTCGCTCCTTTCGCACGTGTGTGGTTTTTGTTCGTTTCGTA
Arachis ipaensis cultivar K30076 chromosome 09.
CP049900.1:15510357-15510376
TGTGCGTGTTTTTTTGCTCGTTTTCACATG15510357TGCGTATTTTTCGCTCCTTTCGCACGTGTGTGGTTTTTGTTCGTTTCGTA
Aspidapion aeneum genome assembly, chromosome: 7.
OY755044.1:32733379-32733398
GTAACGGCGGGTACTAGGAACGTTTTAGGT32733379TGCGTATTTTTCGCTCCTTTTCTGTTATTTTCGGTAACAGCTCCCGGTAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AAAGGAGCGAAAAATACGCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAGGAGCGAAAAATACGCA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.109 | 0.100 | search_plus_done; http://172.18.8.135:50400/match?q=AAAGGAGCGAAAAATACGCA&k=0&no_gap=0&offset=0&limit=50
0.184 | 0.075 | search_minus_done; http://172.18.8.135:50400/match?q=TGCGTATTTTTCGCTCCTTT&k=0&no_gap=0&offset=0&limit=45
0.188 | 0.004 | cgi_end;

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