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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:06:08, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

metagenome genome assembly, chromosome: 1.
OW818680.1:5133704-5133723
GTCAAGGATGTCCTCTTTTCCCAGCCGAGA5133704AAAGGCGAGAAGGTGATTCCTTCGCTGTTAAATTCAGAACCGTTCAAAGC
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141920.1:2559900-2559919
AGATGGTTTTTTTTGGGTTTCAATTTATTT2559900AAAGGCGAGAAGGTGATTCCAATTTTGCTCCTTCAATTTTATTTGTGCAC
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:2634690-2634709
AGATGGTTTCTTTTGGGTTTCAATTTATTT2634690AAAGGCGAGAAGGTGATTCCAATTTTGCTCTTTCAATTTTATTTGTGCAC
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:2714392-2714411
AGATGGTTTCTTTTGGGTTTCAATTTATTT2714392AAAGGCGAGAAGGTGATTCCAATTTTGCTCTTTCAATTTTATTTGTGCAC
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141980.1:2704862-2704881
AGATGGTTTCTTTTGGGTTTCAATTTATTT2704862AAAGGCGAGAAGGTGATTCCAATTTTGCTCCTTCAATTTTATTTGTGCAC
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:2625069-2625088
AGATGGTTTCTTTTGGGTTTCAATTTATTT2625069AAAGGCGAGAAGGTGATTCCAATTTTGCTCCTTCAATTTTATTTGTGCAC
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:2728964-2728983
AGATGGTTTCTTTTGGGTTTCAATTTATTT2728964AAAGGCGAGAAGGTGATTCCAATTTTGCTCCTTCAATTTTATTTGTGCAC
Malus domestica genome assembly, chromosome: 11.
OU696687.1:2717222-2717241
AGATGGTTTCTTTTGGGTTTCAATTTATTT2717222AAAGGCGAGAAGGTGATTCCAATTTTGCTCCTTCAATTTTATTTGTGCAC
Malus domestica genome assembly, chromosome: 11.
OU744552.1:2798038-2798057
AGATGGTTTCTTTTGGGTTTCAATTTATTT2798038AAAGGCGAGAAGGTGATTCCAATTTTGCTCCTTCAATTTTATTTGTGCAC
Malus domestica genome assembly, chromosome: 11.
OU744963.1:2837990-2838009
AGATGGTTTCTTTTGGGTTTCAATTTATTT2837990AAAGGCGAGAAGGTGATTCCAATTTTGCTCCTTCAATTTTATTTGTGCAC
Malus domestica genome assembly, chromosome: 11.
OU745001.1:2778447-2778466
AGATGGTTTCTTTTGGGTTTCAATTTATTT2778447AAAGGCGAGAAGGTGATTCCAATTTTGCTCCTTCAATTTTATTTGTGCAC
Mdfw2064A18_e19222.g1 Mdfw Malus domestica cDNA 5', mRNA sequence.
GO553582.1:26-45
GCACCGATTTTTTTTTTTTTTTTTT26GGAATCACCTTCTCGCCTTTAAATAAATTGAAACCCAAAAGAAACCATCT
Malus x robusta genome assembly, chromosome: 5.
OY720329.1:38495467-38495486
GTGCACAAATAAAATTGAAAGAGCAAAATT38495467GGAATCACCTTCTCGCCTTTAAATAAATTGAAACCCAAAAGAAACCATCT
Cystobacter fuscus strain DSM 52655 chromosome, complete genome.
CP022098.1:813216-813235
TCCTGAAGAGCTTCGTAGAGCTGGTCGGTC813216GGAATCACCTTCTCGCCTTTGAGCGGCGGCGGCAGTTGGTCGCTGAGCTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAAGGCGAGAAGGTGATTCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAGGCGAGAAGGTGATTCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.183 | 0.175 | search_plus_done; http://172.18.8.135:50400/match?q=AAAGGCGAGAAGGTGATTCC&k=0&no_gap=0&offset=0&limit=50
0.368 | 0.185 | search_minus_done; http://172.18.8.135:50400/match?q=GGAATCACCTTCTCGCCTTT&k=0&no_gap=0&offset=0&limit=39
0.370 | 0.002 | cgi_end;

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