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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-05 11:50:22, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Trifolium repens mRNA, clone: WCC06k10_061, unspecified EST.
FY456291.1:68-87
CTTTTCTTTGTTTATTCTCTATGTATGGAC68AAAGGTTGGGGACTTGCTCTTGATACTTCTTCATCTTCATCTCCAATACC
Trifolium repens mRNA, clone: WCC23i16_053, unspecified EST.
FY462202.1:85-104
CTTTTCTTTGTTTATTCTCTATATATGGAC85AAAGGTTGGGGACTTGCTCTTGATACTTCTTCATCTTCATCTCCAATACC
Trifolium repens isolate ACLI19 chromosome 02_Occ.
CP125838.1:7694212-7694231
CTTTTCTTTGTTTATTCTCTATATATGGAC7694212AAAGGTTGGGGACTTGCTCTTGATACTTCTTCATCTTCATCTCCAATACC
Vicia faba genome assembly, chromosome: 1L.
OX451736.1:1584555327-1584555346
TTTTGAGTTTTCATTATATATTATATGGAC1584555327AAAGGTTGGGGACTTGCTCTTGACGCTTCTTCTTCCTCTCCAATTCCAAT
Lathyrus sativus genome assembly, chromosome: 1.
OZ012735.1:105491803-105491822
TTTTCTGTTTTCATTATATATTATATGGAC105491803AAAGGTTGGGGACTTGCTCTTGACACTTCTTCTTCTTTTTTACCTTCCAA
Lathyrus linifolius genome assembly, chromosome: 1.
OZ206515.1:887613718-887613737
TTTTCTGTTTTCATTATATATTATATGGAC887613718AAAGGTTGGGGACTTGCTCTTGACACTTCTTCTTCCTCTCCAATTCCAAT
Vicia parviflora genome assembly, chromosome: 1.
OZ246701.1:21856692-21856711
TTTTGAGTTTTCATTATATATTATATGGAC21856692AAAGGTTGGGGACTTGCTCTTGACACTTCTTCTTCCTCTCCAATTCCAAT
TSA: Lens culinaris contig04469.Lecu mRNA sequence.
JI850736.1:746-765
ATTGGAATCGGAGAGGAAGAAGAAGTGTCA746AGAGCAAGTCCCCAACCTTTGTCCATATAATATATAATGAGATCAGAGAT
Trifolium repens isolate ACLI19 chromosome 02_Pall.
CP125839.1:8265556-8265575
GGTATTGGAGATGAAGATGAAGAAGTATCA8265556AGAGCAAGTCCCCAACCTTTGTCCATATATATATAGAATATAGAATGAAC
Trifolium subterraneum genome assembly, chromosome: 2.
OX637462.1:9369235-9369254
GGTATAGGTGAAGAAGATGAAGAAGTATCA9369235AGAGCAAGTCCCCAACCTTTGTCCATATATAGAATGAGCAAAGAAAAGGA
Trifolium fragiferum genome assembly, chromosome: 7.
OX940795.1:19366019-19366038
GGTATTGGAGAGGAAGATGAAGAAGTATCA19366019AGAGCAAGTCCCCAACCTTTGTCCATATATATAGAAAAGAAAGAGAATAT
Trifolium occidentale genome assembly, chromosome: 8.
OZ060775.1:7421793-7421812
GGTATTGGAGATGAAGATGAAGAAGTATCA7421793AGAGCAAGTCCCCAACCTTTGTCCATATATAGAGAATAAACAAAGAAAAG
Trifolium striatum genome assembly, chromosome: 1.
OZ060913.1:13135951-13135970
GGTACTGGTGAGGAAGATGAAGAAGTATCA13135951AGAGCAAGTCCCCAACCTTTGTCCATAAATAGAATATATAGAATGAATAA
Pisum sativum genome assembly, chromosome: 1.
OZ075428.1:48393238-48393257
GGAATTTGAGAGGAAGAAGAAGAAGTGTCA48393238AGAGCAAGTCCCCAACCTTTGTCCATATAATATATTAATGAAAACAGAAA
Vicia sativa genome assembly, chromosome: 1.
OZ078044.1:33420426-33420445
ATTGGAATTGGAGAGGAAGAAGGAGTGTCA33420426AGAGCAAGTCCCCAACCTTTGTCCATATATTATATAATGAAAACTCAAAA
Pisum sativum genome assembly, chromosome: 1.
OZ173750.1:48358826-48358845
GGAATTTGAGAGGAAGAAGAAGAAGTGTCA48358826AGAGCAAGTCCCCAACCTTTGTCCATATAATATATTAATGAAAACAGAAA
Trifolium bocconei genome assembly, chromosome: 3.
OZ277736.1:7511683-7511702
GGTATTGGAGAAGAAGATGAAGAAGTATCA7511683AGAGCAAGTCCCCAACCTTTGTCCATAAATAGAAATATATAGAATGAACA
Trifolium bocconei genome assembly, chromosome: 3.
OZ277833.1:7515240-7515259
GGTATTGGAGAAGAAGATGAAGAAGTATCA7515240AGAGCAAGTCCCCAACCTTTGTCCATAAATAGAAATATATAGAATGAACA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAAGGTTGGGGACTTGCTCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAAGGTTGGGGACTTGCTCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.358 | 0.348 | search_plus_done; http://172.18.8.135:50900/match?q=AAAGGTTGGGGACTTGCTCT&k=0&no_gap=0&offset=0&limit=50
0.534 | 0.177 | search_minus_done; http://172.18.8.135:50900/match?q=AGAGCAAGTCCCCAACCTTT&k=0&no_gap=0&offset=0&limit=43
0.542 | 0.007 | cgi_end;

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