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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:08:23, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Microcaecilia unicolor genome assembly, chromosome: 6.
LR594637.1:300466002-300466020
TTGGCATTCCTTTCTCCAGATCAATATGTT300466002AAATAGTCCTTTGGGGCATTCCACTAGCGTGACCCTTGTAAATATGGAT
Heterocephalus glaber genome assembly, chromosome: 8.
OX090916.1:55834284-55834302
CAGCCGCTCCCTCTGGTGGGGTTTGGGCTG55834284ATGCCCCAAAGGACTATTTCATTCCTGATTCCCTGTCAGGGAATCAAAT
Heterocephalus glaber genome assembly, chromosome: 8.
OX090948.1:48773689-48773707
CAGCCGCTCCCTCTGGTGGGGTTTGGGCTG48773689ATGCCCCAAAGGACTATTTCATTCCTGATTCCCTGTCAGGGAATCAAAT
Heterocephalus glaber genome assembly, chromosome: 6.
OZ001071.1:29073190-29073208
CAGCCGCTCCCTCTGGTGGGGTTTGGGCTG29073190ATGCCCCAAAGGACTATTTCATTCCTGATTCCCTGTCAGGGAATCAAAT
Heterocephalus glaber genome assembly, chromosome: 6.
OZ001114.1:28617558-28617576
CAGCCGCTCCCTCTGGTGGGGTTTGGGCTG28617558ATGCCCCAAAGGACTATTTCATTCCTGATTCCCTGTCAGGGAATCAAAT
KBrB100D02F KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB100D02, genomic survey sequence.
ED515460.1:759-777
AGAGCTTTTATGCTTTTGTTTAATTTTTGA759ATGCCCCAAAGGACTATTTGATCCGTCTAGCACTCTCAAGTTCTAACCA
Rattus norvegicus clone CH230-132O7, WORKING DRAFT SEQUENCE.
AC105632.3:24550-24568
GAAAGAGTCAACTTGCTTTTTCTTTTCTTC24550ATGCCCCAAAGGACTATTTAAACAAAGCCCCCACTCCCCTTTCCCTAGG
Rattus norvegicus clone CH230-218D21, WORKING DRAFT SEQUENCE, 2 unordered pieces.
AC111872.4:159866-159884
GAAAGAGTCAACTTGCTTTTTCTTTTCTTC159866ATGCCCCAAAGGACTATTTAAACAAAGCCCCCACTCCCCTTTCCCTAGG
Brassica rapa subsp. pekinensis clone KBrH043I21, complete sequence.
FP340640.1:116563-116581
AGAGCTTTTATGCTTTTGTTTAATTTTTGA116563ATGCCCCAAAGGACTATTTGATCCGTCTAGCACTCTCAAGTTCTAACCA
Lunularia cruciata genome assembly, chromosome: 1.
OX419755.1:63582228-63582246
ATTGGTTCAAGAACATGCAAAAAGATGCAT63582228ATGCCCCAAAGGACTATTTACAACCACTCCATACTTGGTCTCACACATG
Helicoverpa zea isolate GA-R chromosome 22.
CP089909.1:10504507-10504525
CCGAAACCTAATTAAGCGAAAACAAATCTC10504507ATGCCCCAAAGGACTATTTAAAACATTAAAAAAACAGATGACTGTCTAA
Autographa gamma genome assembly, chromosome: Z.
LR989849.1:1351424-1351442
ATACCAAAACCTTTATTGTTTTGAATAAAA1351424ATGCCCCAAAGGACTATTTTTTTTATTCATAATTAATTTGATCGATCGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAATAGTCCTTTGGGGCAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAATAGTCCTTTGGGGCAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.287 | 0.278 | search_plus_done; http://172.18.8.135:50400/match?q=AAATAGTCCTTTGGGGCAT&k=0&no_gap=0&offset=0&limit=50
0.399 | 0.112 | search_minus_done; http://172.18.8.135:50400/match?q=ATGCCCCAAAGGACTATTT&k=0&no_gap=0&offset=0&limit=49
0.407 | 0.008 | cgi_end;

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